RNA–Protein interactions for RNA: ENST00000454749.1

LINC00652-202, long intergenic non-protein coding RNA 652, humanhuman

TSL 1 (best) BASIC

Gene LINC00652, Length 963 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00652-202ENST00000454749 AEBP2Q6ZN18 517 aaPredicted RBP19.48■□□□□ 0.71
LINC00652-202ENST00000454749 NISCHQ9Y2I1 1504 aa18.82■□□□□ 0.6
LINC00652-202ENST00000454749 CHIC1Q5VXU3 224 aa18.59■□□□□ 0.57
LINC00652-202ENST00000454749 ABCC9O60706 1549 aa18.44■□□□□ 0.54
LINC00652-202ENST00000454749 DNAJC5BQ9UF47 199 aa18.38■□□□□ 0.53
LINC00652-202ENST00000454749 DNAJC5Q9H3Z4 198 aa17.67■□□□□ 0.42
LINC00652-202ENST00000454749 CCDC180Q9P1Z9 1646 aa17.24■□□□□ 0.35
LINC00652-202ENST00000454749 PABPN1Q86U42 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
LINC00652-202ENST00000454749 RB1CC1Q8TDY2 1594 aa16.99■□□□□ 0.31
LINC00652-202ENST00000454749 CECR2Q9BXF3 1484 aa16.72■□□□□ 0.27
LINC00652-202ENST00000454749 NACADO15069 1562 aa16.61■□□□□ 0.25
LINC00652-202ENST00000454749 UNC13AQ9UPW8 1703 aa16.59■□□□□ 0.25
LINC00652-202ENST00000454749 BICRAQ9NZM4 1560 aa16.59■□□□□ 0.25
LINC00652-202ENST00000454749 CC2D2AQ9P2K1 1620 aa16.57■□□□□ 0.24
LINC00652-202ENST00000454749 SENP3Q9H4L4 574 aaPredicted RBP16.46■□□□□ 0.23
LINC00652-202ENST00000454749 TRIM41Q8WV44 630 aa16.41■□□□□ 0.22
LINC00652-202ENST00000454749 PHF23Q9BUL5 403 aaPredicted RBP16.38■□□□□ 0.21
LINC00652-202ENST00000454749 DCAF8L2P0C7V8 631 aa16.34■□□□□ 0.21
LINC00652-202ENST00000454749 CUX2O14529 1486 aa16.34■□□□□ 0.21
LINC00652-202ENST00000454749 EIF4G1Q04637 1599 aaKnown RBP16.26■□□□□ 0.19
LINC00652-202ENST00000454749 SHROOM4Q9ULL8 1493 aa16.2■□□□□ 0.18
LINC00652-202ENST00000454749 MYO15BQ96JP2 1530 aa16.01■□□□□ 0.15
LINC00652-202ENST00000454749 ERCC6Q03468 1493 aa15.97■□□□□ 0.15
LINC00652-202ENST00000454749 SCRIBQ14160 1630 aa15.72■□□□□ 0.11
LINC00652-202ENST00000454749 ZCCHC6Q5VYS8 1495 aaKnown RBP15.65■□□□□ 0.1
LINC00652-202ENST00000454749 DCAF1Q9Y4B6 1507 aa15.58■□□□□ 0.08
LINC00652-202ENST00000454749 THOC2Q8NI27 1593 aaKnown RBP15.56■□□□□ 0.08
LINC00652-202ENST00000454749 NESP48681 1621 aa15.53■□□□□ 0.08
LINC00652-202ENST00000454749 OSCARQ8IYS5 282 aa15.42■□□□□ 0.06
LINC00652-202ENST00000454749 FOXD1Q16676 465 aa15.41■□□□□ 0.06
LINC00652-202ENST00000454749 NCAPD3P42695 1498 aa15.39■□□□□ 0.05
LINC00652-202ENST00000454749 BAZ1AQ9NRL2 1556 aaPredicted RBP15.36■□□□□ 0.05
LINC00652-202ENST00000454749 SMARCA2P51531 1590 aa15.35■□□□□ 0.05
LINC00652-202ENST00000454749 TRHP20396 242 aaPredicted RBP15.34■□□□□ 0.05
LINC00652-202ENST00000454749 ILDR1Q86SU0 546 aaPredicted RBP15.33■□□□□ 0.04
LINC00652-202ENST00000454749 RIMBP3CA6NJZ7 1639 aa15.32■□□□□ 0.04
LINC00652-202ENST00000454749 RIMBP3BA6NNM3 1639 aa15.32■□□□□ 0.04
LINC00652-202ENST00000454749 RIMBP3Q9UFD9 1639 aa15.32■□□□□ 0.04
LINC00652-202ENST00000454749 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
LINC00652-202ENST00000454749 ATAD2BQ9ULI0 1458 aa15.18■□□□□ 0.02
LINC00652-202ENST00000454749 LAMC3Q9Y6N6 1575 aa15.18■□□□□ 0.02
LINC00652-202ENST00000454749 ARHGEF11O15085 1522 aa15.17■□□□□ 0.02
LINC00652-202ENST00000454749 CYB5RLQ6IPT4 315 aa15.16■□□□□ 0.02
LINC00652-202ENST00000454749 PDS5BQ9NTI5 1447 aa15.15■□□□□ 0.02
LINC00652-202ENST00000454749 HMGXB3Q12766 1538 aa15.13■□□□□ 0.01
LINC00652-202ENST00000454749 WDR62O43379 1518 aa15.09■□□□□ 0.01
LINC00652-202ENST00000454749 MRC2Q9UBG0 1479 aa15.08■□□□□ 0.01
LINC00652-202ENST00000454749 ARAP1Q96P48 1450 aa14.95□□□□□ -0.02
LINC00652-202ENST00000454749 BAZ1BQ9UIG0 1483 aaKnown RBP14.94□□□□□ -0.02
LINC00652-202ENST00000454749 PLPPR3Q6T4P5 718 aa14.89□□□□□ -0.03
LINC00652-202ENST00000454749 CADPSQ9ULU8 1353 aa14.87□□□□□ -0.03
LINC00652-202ENST00000454749 SMARCA4P51532 1647 aa14.84□□□□□ -0.03
LINC00652-202ENST00000454749 CEP164Q9UPV0 1460 aa14.79□□□□□ -0.04
LINC00652-202ENST00000454749 RSF1Q96T23 1441 aaPredicted RBP14.71□□□□□ -0.05
LINC00652-202ENST00000454749 PEG3Q9GZU2 1588 aa14.71□□□□□ -0.05
LINC00652-202ENST00000454749 FANCD2Q9BXW9 1451 aa14.69□□□□□ -0.06
LINC00652-202ENST00000454749 ZNF608Q9ULD9 1512 aaPredicted RBP14.67□□□□□ -0.06
LINC00652-202ENST00000454749 URB2Q14146 1524 aaKnown RBP14.65□□□□□ -0.06
LINC00652-202ENST00000454749 KDM4FA0A1W2PPD8 638 aa14.62□□□□□ -0.07
LINC00652-202ENST00000454749 PPP6R1Q9UPN7 881 aa14.58□□□□□ -0.08
LINC00652-202ENST00000454749 CHD1O14646 1710 aa14.56□□□□□ -0.08
LINC00652-202ENST00000454749 IFT140Q96RY7 1462 aa14.55□□□□□ -0.08
LINC00652-202ENST00000454749 ADRA2BP18089 450 aa14.53□□□□□ -0.08
LINC00652-202ENST00000454749 FBLN2P98095 1184 aa14.51□□□□□ -0.09
LINC00652-202ENST00000454749 MROH2BQ7Z745 1585 aa14.5□□□□□ -0.09
LINC00652-202ENST00000454749 FBXO41Q8TF61 875 aa14.49□□□□□ -0.09
LINC00652-202ENST00000454749 EIF4G3O43432 1585 aaKnown RBP14.48□□□□□ -0.09
LINC00652-202ENST00000454749 CFTRP13569 1480 aa14.46□□□□□ -0.09
LINC00652-202ENST00000454749 LMTK3Q96Q04 1460 aa14.44□□□□□ -0.1
LINC00652-202ENST00000454749 ERCC6L2Q5T890 1561 aa14.42□□□□□ -0.1
LINC00652-202ENST00000454749 WIZO95785 1651 aa14.42□□□□□ -0.1
LINC00652-202ENST00000454749 CLASP1Q7Z460 1538 aa14.41□□□□□ -0.1
LINC00652-202ENST00000454749 PIAS4Q8N2W9 510 aaPredicted RBP14.41□□□□□ -0.1
LINC00652-202ENST00000454749 SOCS7O14512 581 aa14.4□□□□□ -0.1
LINC00652-202ENST00000454749 AQRO60306 1485 aaKnown RBP eCLIP14.39□□□□□ -0.11
LINC00652-202ENST00000454749 GAPVD1Q14C86 1478 aa14.37□□□□□ -0.11
LINC00652-202ENST00000454749 HECW2Q9P2P5 1572 aa14.34□□□□□ -0.11
LINC00652-202ENST00000454749 ILDR2Q71H61 639 aa14.32□□□□□ -0.12
LINC00652-202ENST00000454749 KIF13AQ9H1H9 1805 aa14.3□□□□□ -0.12
LINC00652-202ENST00000454749 TOPBP1Q92547 1522 aa14.28□□□□□ -0.12
LINC00652-202ENST00000454749 SYNJ1O43426 1573 aa14.27□□□□□ -0.12
LINC00652-202ENST00000454749 MSH5O43196 834 aa14.25□□□□□ -0.13
LINC00652-202ENST00000454749 PRDM2Q13029 1718 aa14.24□□□□□ -0.13
LINC00652-202ENST00000454749 TARBP1Q13395 1621 aaKnown RBP14.23□□□□□ -0.13
LINC00652-202ENST00000454749 CHMP7Q8WUX9 453 aaPredicted RBP14.22□□□□□ -0.13
LINC00652-202ENST00000454749 TOP2AP11388 1531 aaKnown RBP14.2□□□□□ -0.14
LINC00652-202ENST00000454749 SYNJ2O15056 1496 aa14.2□□□□□ -0.14
LINC00652-202ENST00000454749 SNAPC4Q5SXM2 1469 aa14.19□□□□□ -0.14
LINC00652-202ENST00000454749 KDM6BO15054 1643 aa14.18□□□□□ -0.14
LINC00652-202ENST00000454749 ADGRL1O94910 1474 aa14.18□□□□□ -0.14
LINC00652-202ENST00000454749 FAM69CQ0P6D2 419 aa14.16□□□□□ -0.14
LINC00652-202ENST00000454749 ABCC8Q09428 1581 aa14.14□□□□□ -0.15
LINC00652-202ENST00000454749 TDRD9Q8NDG6 1382 aaKnown RBP14.13□□□□□ -0.15
LINC00652-202ENST00000454749 DISP3Q9P2K9 1392 aa14.13□□□□□ -0.15
LINC00652-202ENST00000454749 ABCC10Q5T3U5 1492 aa14.11□□□□□ -0.15
LINC00652-202ENST00000454749 DNMBPQ6XZF7 1577 aa14.1□□□□□ -0.15
LINC00652-202ENST00000454749 MAGI1Q96QZ7 1491 aaPredicted RBP14.08□□□□□ -0.16
LINC00652-202ENST00000454749 POLA1P09884 1462 aaPredicted RBP14.07□□□□□ -0.16
LINC00652-202ENST00000454749 RAD54L2Q9Y4B4 1467 aa14.06□□□□□ -0.16
LINC00652-202ENST00000454749 DIP2BQ9P265 1576 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms