RNA–Protein interactions for RNA: ENST00000453394.5

RAD50-205, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 5

Gene RAD50, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-205ENST00000453394 NISCHQ9Y2I1 1504 aa19.49■□□□□ 0.71
RAD50-205ENST00000453394 AEBP2Q6ZN18 517 aaPredicted RBP19.28■□□□□ 0.68
RAD50-205ENST00000453394 CHIC1Q5VXU3 224 aa18.13■□□□□ 0.49
RAD50-205ENST00000453394 CCDC180Q9P1Z9 1646 aa17.28■□□□□ 0.36
RAD50-205ENST00000453394 SENP3Q9H4L4 574 aaPredicted RBP16.54■□□□□ 0.24
RAD50-205ENST00000453394 ABCC9O60706 1549 aa16.47■□□□□ 0.23
RAD50-205ENST00000453394 ZCCHC6Q5VYS8 1495 aaKnown RBP16.33■□□□□ 0.2
RAD50-205ENST00000453394 PHF23Q9BUL5 403 aaPredicted RBP16.26■□□□□ 0.19
RAD50-205ENST00000453394 DCAF1Q9Y4B6 1507 aa16.24■□□□□ 0.19
RAD50-205ENST00000453394 MYO15BQ96JP2 1530 aa16.23■□□□□ 0.19
RAD50-205ENST00000453394 NACADO15069 1562 aa16.17■□□□□ 0.18
RAD50-205ENST00000453394 RB1CC1Q8TDY2 1594 aa16.09■□□□□ 0.17
RAD50-205ENST00000453394 DCAF8L2P0C7V8 631 aa15.97■□□□□ 0.15
RAD50-205ENST00000453394 SCRIBQ14160 1630 aa15.66■□□□□ 0.1
RAD50-205ENST00000453394 UNC13AQ9UPW8 1703 aa15.66■□□□□ 0.1
RAD50-205ENST00000453394 SHROOM4Q9ULL8 1493 aa15.58■□□□□ 0.09
RAD50-205ENST00000453394 BICRAQ9NZM4 1560 aa15.53■□□□□ 0.08
RAD50-205ENST00000453394 FOXD1Q16676 465 aa15.4■□□□□ 0.06
RAD50-205ENST00000453394 PABPN1Q86U42 306 aaKnown RBP eCLIP15.37■□□□□ 0.05
RAD50-205ENST00000453394 EIF4G1Q04637 1599 aaKnown RBP15.13■□□□□ 0.01
RAD50-205ENST00000453394 BAZ1AQ9NRL2 1556 aaPredicted RBP15.13■□□□□ 0.01
RAD50-205ENST00000453394 SMARCA4P51532 1647 aa15.07■□□□□ 0
RAD50-205ENST00000453394 CECR2Q9BXF3 1484 aa15.07■□□□□ 0
RAD50-205ENST00000453394 PEG3Q9GZU2 1588 aa14.98□□□□□ -0.01
RAD50-205ENST00000453394 MROH2BQ7Z745 1585 aa14.97□□□□□ -0.01
RAD50-205ENST00000453394 CC2D2AQ9P2K1 1620 aa14.96□□□□□ -0.01
RAD50-205ENST00000453394 SMARCA2P51531 1590 aa14.95□□□□□ -0.02
RAD50-205ENST00000453394 RSF1Q96T23 1441 aaPredicted RBP14.92□□□□□ -0.02
RAD50-205ENST00000453394 ATAD2BQ9ULI0 1458 aa14.9□□□□□ -0.02
RAD50-205ENST00000453394 NCAPD3P42695 1498 aa14.88□□□□□ -0.03
RAD50-205ENST00000453394 HMGXB3Q12766 1538 aa14.88□□□□□ -0.03
RAD50-205ENST00000453394 WIZO95785 1651 aa14.82□□□□□ -0.04
RAD50-205ENST00000453394 BAZ1BQ9UIG0 1483 aaKnown RBP14.8□□□□□ -0.04
RAD50-205ENST00000453394 DNAJC5BQ9UF47 199 aa14.77□□□□□ -0.04
RAD50-205ENST00000453394 TOP2AP11388 1531 aaKnown RBP14.76□□□□□ -0.05
RAD50-205ENST00000453394 SUPT5HO00267 1087 aaKnown RBP14.62□□□□□ -0.07
RAD50-205ENST00000453394 MSH5O43196 834 aa14.55□□□□□ -0.08
RAD50-205ENST00000453394 POTEDQ86YR6 584 aa14.53□□□□□ -0.08
RAD50-205ENST00000453394 CCDC88BA6NC98 1476 aa14.52□□□□□ -0.09
RAD50-205ENST00000453394 LAMC3Q9Y6N6 1575 aa14.46□□□□□ -0.09
RAD50-205ENST00000453394 CADPSQ9ULU8 1353 aa14.43□□□□□ -0.1
RAD50-205ENST00000453394 CFTRP13569 1480 aa14.43□□□□□ -0.1
RAD50-205ENST00000453394 PLPPR3Q6T4P5 718 aa14.4□□□□□ -0.1
RAD50-205ENST00000453394 PRDM2Q13029 1718 aa14.38□□□□□ -0.11
RAD50-205ENST00000453394 PIAS4Q8N2W9 510 aaPredicted RBP14.34□□□□□ -0.11
RAD50-205ENST00000453394 PDS5BQ9NTI5 1447 aa14.33□□□□□ -0.12
RAD50-205ENST00000453394 NESP48681 1621 aa14.32□□□□□ -0.12
RAD50-205ENST00000453394 FANCD2Q9BXW9 1451 aa14.26□□□□□ -0.13
RAD50-205ENST00000453394 CEP164Q9UPV0 1460 aa14.24□□□□□ -0.13
RAD50-205ENST00000453394 ERCC6Q03468 1493 aa14.22□□□□□ -0.13
RAD50-205ENST00000453394 KIF21AQ7Z4S6 1674 aa14.21□□□□□ -0.13
RAD50-205ENST00000453394 PPP6R1Q9UPN7 881 aa14.21□□□□□ -0.14
RAD50-205ENST00000453394 ABCC8Q09428 1581 aa14.16□□□□□ -0.14
RAD50-205ENST00000453394 MRC2Q9UBG0 1479 aa14.16□□□□□ -0.14
RAD50-205ENST00000453394 ADRA2BP18089 450 aa14.14□□□□□ -0.15
RAD50-205ENST00000453394 THOC2Q8NI27 1593 aaKnown RBP14.14□□□□□ -0.15
RAD50-205ENST00000453394 WDR62O43379 1518 aa14.13□□□□□ -0.15
RAD50-205ENST00000453394 DNMBPQ6XZF7 1577 aa14.11□□□□□ -0.15
RAD50-205ENST00000453394 WRNQ14191 1432 aaPredicted RBP eCLIP14.09□□□□□ -0.15
RAD50-205ENST00000453394 URB2Q14146 1524 aaKnown RBP14.08□□□□□ -0.16
RAD50-205ENST00000453394 TOPBP1Q92547 1522 aa14.07□□□□□ -0.16
RAD50-205ENST00000453394 BIVM-ERCC5R4GMW8 1640 aa14.06□□□□□ -0.16
RAD50-205ENST00000453394 TOP2BQ02880 1626 aa14.05□□□□□ -0.16
RAD50-205ENST00000453394 CUX2O14529 1486 aa14.05□□□□□ -0.16
RAD50-205ENST00000453394 CUX1P39880 1505 aa14.05□□□□□ -0.16
RAD50-205ENST00000453394 SYNJ1O43426 1573 aa14.01□□□□□ -0.17
RAD50-205ENST00000453394 POLA1P09884 1462 aaPredicted RBP13.96□□□□□ -0.17
RAD50-205ENST00000453394 FGD5Q6ZNL6 1462 aa13.96□□□□□ -0.17
RAD50-205ENST00000453394 IFT140Q96RY7 1462 aa13.95□□□□□ -0.18
RAD50-205ENST00000453394 WDR97A6NE52 1622 aa13.93□□□□□ -0.18
RAD50-205ENST00000453394 TARBP1Q13395 1621 aaKnown RBP13.9□□□□□ -0.18
RAD50-205ENST00000453394 SOGA1O94964 1423 aa13.89□□□□□ -0.19
RAD50-205ENST00000453394 ABCA10Q8WWZ4 1543 aa13.89□□□□□ -0.19
RAD50-205ENST00000453394 TRIM41Q8WV44 630 aa13.87□□□□□ -0.19
RAD50-205ENST00000453394 RAD54L2Q9Y4B4 1467 aa13.84□□□□□ -0.19
RAD50-205ENST00000453394 ABCA5Q8WWZ7 1642 aa13.81□□□□□ -0.2
RAD50-205ENST00000453394 EIF4G3O43432 1585 aaKnown RBP13.79□□□□□ -0.2
RAD50-205ENST00000453394 KIF27Q86VH2 1401 aa13.79□□□□□ -0.2
RAD50-205ENST00000453394 EEA1Q15075 1411 aa13.78□□□□□ -0.2
RAD50-205ENST00000453394 ZNF608Q9ULD9 1512 aaPredicted RBP13.77□□□□□ -0.21
RAD50-205ENST00000453394 GAPVD1Q14C86 1478 aa13.76□□□□□ -0.21
RAD50-205ENST00000453394 ERICH3Q5RHP9 1530 aa13.75□□□□□ -0.21
RAD50-205ENST00000453394 GRIN2BQ13224 1484 aa13.74□□□□□ -0.21
RAD50-205ENST00000453394 TDRD9Q8NDG6 1382 aaKnown RBP13.73□□□□□ -0.21
RAD50-205ENST00000453394 PBRM1Q86U86 1689 aa13.72□□□□□ -0.21
RAD50-205ENST00000453394 AQRO60306 1485 aaKnown RBP eCLIP13.71□□□□□ -0.219e-10■■■■■ 36.7
RAD50-205ENST00000453394 MAGI1Q96QZ7 1491 aaPredicted RBP13.71□□□□□ -0.21
RAD50-205ENST00000453394 CUL7Q14999 1698 aa13.69□□□□□ -0.22
RAD50-205ENST00000453394 ADAMTS12P58397 1594 aa13.65□□□□□ -0.22
RAD50-205ENST00000453394 SNAPC4Q5SXM2 1469 aa13.65□□□□□ -0.23
RAD50-205ENST00000453394 IGF1RP08069 1367 aa13.64□□□□□ -0.23
RAD50-205ENST00000453394 FHAD1B1AJZ9 1412 aa13.63□□□□□ -0.23
RAD50-205ENST00000453394 RUSC2Q8N2Y8 1516 aa13.62□□□□□ -0.23
RAD50-205ENST00000453394 SYNJ2O15056 1496 aa13.62□□□□□ -0.23
RAD50-205ENST00000453394 PRXQ9BXM0 1461 aa13.59□□□□□ -0.23
RAD50-205ENST00000453394 CSRNP3Q8WYN3 585 aa13.59□□□□□ -0.23
RAD50-205ENST00000453394 CARMIL1Q5VZK9 1371 aa13.58□□□□□ -0.24
RAD50-205ENST00000453394 KIF21BO75037 1637 aa13.58□□□□□ -0.24
RAD50-205ENST00000453394 GRIN2AQ12879 1464 aa13.56□□□□□ -0.24
RAD50-205ENST00000453394 RAPGEF2Q9Y4G8 1499 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms