RNA–Protein interactions for RNA: ENST00000452026.1

CCT6P3-203, Transcript of chaperonin containing TCP1 subunit 6 pseudogene 3, humanhuman

BASIC

Gene CCT6P3, Length 1,383 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6P3-203ENST00000452026 AEBP2Q6ZN18 517 aaPredicted RBP30.07■■■□□ 2.4
CCT6P3-203ENST00000452026 CHIC1Q5VXU3 224 aa29.64■■■□□ 2.33
CCT6P3-203ENST00000452026 NISCHQ9Y2I1 1504 aa27.78■■■□□ 2.04
CCT6P3-203ENST00000452026 PHF23Q9BUL5 403 aaPredicted RBP26.09■■□□□ 1.77
CCT6P3-203ENST00000452026 SENP3Q9H4L4 574 aaPredicted RBP25.47■■□□□ 1.67
CCT6P3-203ENST00000452026 CCDC180Q9P1Z9 1646 aa24.92■■□□□ 1.58
CCT6P3-203ENST00000452026 ABCC9O60706 1549 aa24.69■■□□□ 1.54
CCT6P3-203ENST00000452026 PLPPR3Q6T4P5 718 aa24.19■■□□□ 1.46
CCT6P3-203ENST00000452026 RB1CC1Q8TDY2 1594 aa23.7■■□□□ 1.38
CCT6P3-203ENST00000452026 FOXD1Q16676 465 aa23.61■■□□□ 1.37
CCT6P3-203ENST00000452026 NACADO15069 1562 aa23.56■■□□□ 1.36
CCT6P3-203ENST00000452026 DCAF8L2P0C7V8 631 aa23.56■■□□□ 1.36
CCT6P3-203ENST00000452026 MYO15BQ96JP2 1530 aa23.28■■□□□ 1.32
CCT6P3-203ENST00000452026 ZCCHC6Q5VYS8 1495 aaKnown RBP23.03■■□□□ 1.28
CCT6P3-203ENST00000452026 PABPN1Q86U42 306 aaKnown RBP eCLIP23.02■■□□□ 1.28
CCT6P3-203ENST00000452026 DCAF1Q9Y4B6 1507 aa23.02■■□□□ 1.28
CCT6P3-203ENST00000452026 UNC13AQ9UPW8 1703 aa22.96■■□□□ 1.27
CCT6P3-203ENST00000452026 ADRA2BP18089 450 aa22.93■■□□□ 1.26
CCT6P3-203ENST00000452026 PPP6R1Q9UPN7 881 aa22.93■■□□□ 1.26
CCT6P3-203ENST00000452026 DNAJC5BQ9UF47 199 aa22.89■■□□□ 1.25
CCT6P3-203ENST00000452026 BICRAQ9NZM4 1560 aa22.77■■□□□ 1.24
CCT6P3-203ENST00000452026 SHROOM4Q9ULL8 1493 aa22.76■■□□□ 1.23
CCT6P3-203ENST00000452026 SCRIBQ14160 1630 aa22.63■■□□□ 1.21
CCT6P3-203ENST00000452026 PIAS4Q8N2W9 510 aaPredicted RBP22.35■■□□□ 1.17
CCT6P3-203ENST00000452026 EIF4G1Q04637 1599 aaKnown RBP22.32■■□□□ 1.16
CCT6P3-203ENST00000452026 CC2D2AQ9P2K1 1620 aa22.31■■□□□ 1.16
CCT6P3-203ENST00000452026 CECR2Q9BXF3 1484 aa22.29■■□□□ 1.16
CCT6P3-203ENST00000452026 NCAPD3P42695 1498 aa21.71■■□□□ 1.07
CCT6P3-203ENST00000452026 SMARCA2P51531 1590 aa21.68■■□□□ 1.06
CCT6P3-203ENST00000452026 MSH5O43196 834 aa21.66■■□□□ 1.06
CCT6P3-203ENST00000452026 BAZ1AQ9NRL2 1556 aaPredicted RBP21.63■■□□□ 1.05
CCT6P3-203ENST00000452026 SMARCA4P51532 1647 aa21.62■■□□□ 1.05
CCT6P3-203ENST00000452026 ATAD2BQ9ULI0 1458 aa21.62■■□□□ 1.05
CCT6P3-203ENST00000452026 HMGXB3Q12766 1538 aa21.56■■□□□ 1.04
CCT6P3-203ENST00000452026 BAZ1BQ9UIG0 1483 aaKnown RBP21.5■■□□□ 1.03
CCT6P3-203ENST00000452026 ERCC6Q03468 1493 aa21.47■■□□□ 1.03
CCT6P3-203ENST00000452026 PEG3Q9GZU2 1588 aa21.42■■□□□ 1.02
CCT6P3-203ENST00000452026 PPP4R3CPQ6ZMV5 832 aa21.36■■□□□ 1.01
CCT6P3-203ENST00000452026 CUX2O14529 1486 aa21.34■■□□□ 1.01
CCT6P3-203ENST00000452026 MROH2BQ7Z745 1585 aa21.33■■□□□ 1
CCT6P3-203ENST00000452026 LAMC3Q9Y6N6 1575 aa21.24■□□□□ 0.99
CCT6P3-203ENST00000452026 PDS5BQ9NTI5 1447 aa21.19■□□□□ 0.98
CCT6P3-203ENST00000452026 NESP48681 1621 aa21.17■□□□□ 0.98
CCT6P3-203ENST00000452026 KCNA4P22459 653 aa21.17■□□□□ 0.98
CCT6P3-203ENST00000452026 DNAJC5Q9H3Z4 198 aa21.11■□□□□ 0.97
CCT6P3-203ENST00000452026 WIZO95785 1651 aa21.09■□□□□ 0.97
CCT6P3-203ENST00000452026 CADPSQ9ULU8 1353 aa21.08■□□□□ 0.97
CCT6P3-203ENST00000452026 RSF1Q96T23 1441 aaPredicted RBP20.99■□□□□ 0.95
CCT6P3-203ENST00000452026 SCAF1Q9H7N4 1312 aaKnown RBP20.98■□□□□ 0.95
CCT6P3-203ENST00000452026 KIF21AQ7Z4S6 1674 aa20.96■□□□□ 0.95
CCT6P3-203ENST00000452026 THOC2Q8NI27 1593 aaKnown RBP20.96■□□□□ 0.95
CCT6P3-203ENST00000452026 TOP2AP11388 1531 aaKnown RBP20.92■□□□□ 0.94
CCT6P3-203ENST00000452026 MRC2Q9UBG0 1479 aa20.89■□□□□ 0.93
CCT6P3-203ENST00000452026 NCBP3Q53F19 620 aaKnown RBP20.87■□□□□ 0.93
CCT6P3-203ENST00000452026 CEP164Q9UPV0 1460 aa20.87■□□□□ 0.93
CCT6P3-203ENST00000452026 CFTRP13569 1480 aa20.83■□□□□ 0.93
CCT6P3-203ENST00000452026 FANCD2Q9BXW9 1451 aa20.82■□□□□ 0.92
CCT6P3-203ENST00000452026 WDR62O43379 1518 aa20.78■□□□□ 0.92
CCT6P3-203ENST00000452026 MAPK8IP2Q13387 824 aaPredicted RBP20.72■□□□□ 0.91
CCT6P3-203ENST00000452026 CNKSR2Q8WXI2 1034 aa20.7■□□□□ 0.9
CCT6P3-203ENST00000452026 PRDM2Q13029 1718 aa20.66■□□□□ 0.9
CCT6P3-203ENST00000452026 CCDC88BA6NC98 1476 aa20.65■□□□□ 0.9
CCT6P3-203ENST00000452026 ABCC8Q09428 1581 aa20.57■□□□□ 0.88
CCT6P3-203ENST00000452026 NPM3O75607 178 aaKnown RBP20.57■□□□□ 0.88
CCT6P3-203ENST00000452026 URB2Q14146 1524 aaKnown RBP20.53■□□□□ 0.88
CCT6P3-203ENST00000452026 OSCARQ8IYS5 282 aa20.47■□□□□ 0.87
CCT6P3-203ENST00000452026 IFT140Q96RY7 1462 aa20.46■□□□□ 0.87
CCT6P3-203ENST00000452026 TOPBP1Q92547 1522 aa20.4■□□□□ 0.86
CCT6P3-203ENST00000452026 DNMBPQ6XZF7 1577 aa20.38■□□□□ 0.85
CCT6P3-203ENST00000452026 DMRT2Q9Y5R5 561 aa20.37■□□□□ 0.85
CCT6P3-203ENST00000452026 SUPT5HO00267 1087 aaKnown RBP20.31■□□□□ 0.84
CCT6P3-203ENST00000452026 TRIM41Q8WV44 630 aa20.3■□□□□ 0.84
CCT6P3-203ENST00000452026 ZNF608Q9ULD9 1512 aaPredicted RBP20.23■□□□□ 0.83
CCT6P3-203ENST00000452026 SLC4A1APQ9BWU0 796 aaKnown RBP20.21■□□□□ 0.83
CCT6P3-203ENST00000452026 RNF216Q9NWF9 866 aaPredicted RBP20.21■□□□□ 0.83
CCT6P3-203ENST00000452026 POLA1P09884 1462 aaPredicted RBP20.2■□□□□ 0.82
CCT6P3-203ENST00000452026 SOGA1O94964 1423 aa20.19■□□□□ 0.82
CCT6P3-203ENST00000452026 EIF4G3O43432 1585 aaKnown RBP20.19■□□□□ 0.82
CCT6P3-203ENST00000452026 FBLN2P98095 1184 aa20.16■□□□□ 0.82
CCT6P3-203ENST00000452026 WDR97A6NE52 1622 aa20.15■□□□□ 0.82
CCT6P3-203ENST00000452026 TARBP1Q13395 1621 aaKnown RBP20.15■□□□□ 0.82
CCT6P3-203ENST00000452026 AQRO60306 1485 aaKnown RBP eCLIP20.14■□□□□ 0.828e-8■□□□□ 10.8
CCT6P3-203ENST00000452026 FGD5Q6ZNL6 1462 aa20.1■□□□□ 0.81
CCT6P3-203ENST00000452026 RAD54L2Q9Y4B4 1467 aa20.08■□□□□ 0.8
CCT6P3-203ENST00000452026 TDRD9Q8NDG6 1382 aaKnown RBP20.07■□□□□ 0.8
CCT6P3-203ENST00000452026 HOXD11P31277 338 aaPredicted RBP20.07■□□□□ 0.8
CCT6P3-203ENST00000452026 CHMP7Q8WUX9 453 aaPredicted RBP20.07■□□□□ 0.8
CCT6P3-203ENST00000452026 CUX1P39880 1505 aa20.04■□□□□ 0.8
CCT6P3-203ENST00000452026 GRIN2BQ13224 1484 aa20.01■□□□□ 0.79
CCT6P3-203ENST00000452026 CHD1O14646 1710 aa20.01■□□□□ 0.79
CCT6P3-203ENST00000452026 MAGI1Q96QZ7 1491 aaPredicted RBP20■□□□□ 0.79
CCT6P3-203ENST00000452026 RIMBP3CA6NJZ7 1639 aa19.99■□□□□ 0.79
CCT6P3-203ENST00000452026 RIMBP3BA6NNM3 1639 aa19.99■□□□□ 0.79
CCT6P3-203ENST00000452026 RIMBP3Q9UFD9 1639 aa19.99■□□□□ 0.79
CCT6P3-203ENST00000452026 ARHGEF11O15085 1522 aa19.97■□□□□ 0.79
CCT6P3-203ENST00000452026 EHMT2Q96KQ7 1210 aa19.96■□□□□ 0.79
CCT6P3-203ENST00000452026 SNAPC4Q5SXM2 1469 aa19.96■□□□□ 0.79
CCT6P3-203ENST00000452026 WRNQ14191 1432 aaPredicted RBP eCLIP19.95■□□□□ 0.78
CCT6P3-203ENST00000452026 GAPVD1Q14C86 1478 aa19.94■□□□□ 0.78
CCT6P3-203ENST00000452026 SYNJ1O43426 1573 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms