RNA–Protein interactions for RNA: ENST00000451928.6

PDZK1-205, Transcript of PDZ domain containing 1, humanhuman

TSL 2 BASIC

Gene PDZK1, Length 1,897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZK1-205ENST00000451928 NISCHQ9Y2I1 1504 aa19.82■□□□□ 0.76
PDZK1-205ENST00000451928 AEBP2Q6ZN18 517 aaPredicted RBP18.41■□□□□ 0.54
PDZK1-205ENST00000451928 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
PDZK1-205ENST00000451928 CCDC180Q9P1Z9 1646 aa17.39■□□□□ 0.37
PDZK1-205ENST00000451928 ABCC9O60706 1549 aa17.25■□□□□ 0.35
PDZK1-205ENST00000451928 ZCCHC6Q5VYS8 1495 aaKnown RBP16.83■□□□□ 0.28
PDZK1-205ENST00000451928 SHROOM4Q9ULL8 1493 aa16.61■□□□□ 0.25
PDZK1-205ENST00000451928 RB1CC1Q8TDY2 1594 aa16.49■□□□□ 0.23
PDZK1-205ENST00000451928 DCAF1Q9Y4B6 1507 aa16.46■□□□□ 0.23
PDZK1-205ENST00000451928 NACADO15069 1562 aa16.43■□□□□ 0.22
PDZK1-205ENST00000451928 DCAF8L2P0C7V8 631 aa16.41■□□□□ 0.22
PDZK1-205ENST00000451928 SUPT5HO00267 1087 aaKnown RBP16.37■□□□□ 0.21
PDZK1-205ENST00000451928 MYO15BQ96JP2 1530 aa16.28■□□□□ 0.2
PDZK1-205ENST00000451928 UNC13AQ9UPW8 1703 aa16.14■□□□□ 0.17
PDZK1-205ENST00000451928 PABPN1Q86U42 306 aaKnown RBP eCLIP16.11■□□□□ 0.17
PDZK1-205ENST00000451928 DNAJC5BQ9UF47 199 aa16.09■□□□□ 0.17
PDZK1-205ENST00000451928 BICRAQ9NZM4 1560 aa16.02■□□□□ 0.16
PDZK1-205ENST00000451928 SCRIBQ14160 1630 aa15.86■□□□□ 0.13
PDZK1-205ENST00000451928 HRCP23327 699 aa15.86■□□□□ 0.13
PDZK1-205ENST00000451928 SENP3Q9H4L4 574 aaPredicted RBP15.75■□□□□ 0.11
PDZK1-205ENST00000451928 RSF1Q96T23 1441 aaPredicted RBP15.66■□□□□ 0.1
PDZK1-205ENST00000451928 PCGF6Q9BYE7 350 aa15.61■□□□□ 0.09
PDZK1-205ENST00000451928 EIF4G1Q04637 1599 aaKnown RBP15.61■□□□□ 0.09
PDZK1-205ENST00000451928 CC2D2AQ9P2K1 1620 aa15.6■□□□□ 0.09
PDZK1-205ENST00000451928 PHF23Q9BUL5 403 aaPredicted RBP15.54■□□□□ 0.08
PDZK1-205ENST00000451928 CECR2Q9BXF3 1484 aa15.52■□□□□ 0.07
PDZK1-205ENST00000451928 TRIM26Q12899 539 aaPredicted RBP15.49■□□□□ 0.07
PDZK1-205ENST00000451928 LOC105371045A0A1W2PR82 267 aa15.46■□□□□ 0.07
PDZK1-205ENST00000451928 TRIM41Q8WV44 630 aa15.38■□□□□ 0.05
PDZK1-205ENST00000451928 ZEB1P37275 1124 aaPredicted RBP15.35■□□□□ 0.05
PDZK1-205ENST00000451928 MROH2BQ7Z745 1585 aa15.31■□□□□ 0.04
PDZK1-205ENST00000451928 BAZ1AQ9NRL2 1556 aaPredicted RBP15.31■□□□□ 0.04
PDZK1-205ENST00000451928 WIZO95785 1651 aa15.23■□□□□ 0.03
PDZK1-205ENST00000451928 PPARGC1BQ86YN6 1023 aaKnown RBP15.23■□□□□ 0.03
PDZK1-205ENST00000451928 NCAPD3P42695 1498 aa15.18■□□□□ 0.02
PDZK1-205ENST00000451928 SMARCA4P51532 1647 aa15.16■□□□□ 0.02
PDZK1-205ENST00000451928 ATAD2BQ9ULI0 1458 aa15.15■□□□□ 0.02
PDZK1-205ENST00000451928 TOP2AP11388 1531 aaKnown RBP15.14■□□□□ 0.01
PDZK1-205ENST00000451928 SMARCA2P51531 1590 aa15.1■□□□□ 0.01
PDZK1-205ENST00000451928 HMGXB3Q12766 1538 aa15.05■□□□□ 0
PDZK1-205ENST00000451928 FAM9AQ8IZU1 332 aaPredicted RBP15.05■□□□□ -0
PDZK1-205ENST00000451928 PEG3Q9GZU2 1588 aa15.03■□□□□ -0
PDZK1-205ENST00000451928 EEA1Q15075 1411 aa15□□□□□ -0.01
PDZK1-205ENST00000451928 BAZ1BQ9UIG0 1483 aaKnown RBP14.99□□□□□ -0.01
PDZK1-205ENST00000451928 WRNQ14191 1432 aaPredicted RBP eCLIP14.99□□□□□ -0.01
PDZK1-205ENST00000451928 CCDC88BA6NC98 1476 aa14.95□□□□□ -0.02
PDZK1-205ENST00000451928 NESP48681 1621 aa14.88□□□□□ -0.03
PDZK1-205ENST00000451928 TNIKQ9UKE5 1360 aa14.87□□□□□ -0.03
PDZK1-205ENST00000451928 ABCC8Q09428 1581 aa14.87□□□□□ -0.03
PDZK1-205ENST00000451928 ERCC6Q03468 1493 aa14.86□□□□□ -0.03
PDZK1-205ENST00000451928 CEP162Q5TB80 1403 aa14.83□□□□□ -0.04
PDZK1-205ENST00000451928 LAMC3Q9Y6N6 1575 aa14.8□□□□□ -0.04
PDZK1-205ENST00000451928 CUX2O14529 1486 aa14.79□□□□□ -0.04
PDZK1-205ENST00000451928 GOLGA3Q08378 1498 aa14.78□□□□□ -0.04
PDZK1-205ENST00000451928 CSRNP3Q8WYN3 585 aa14.75□□□□□ -0.05
PDZK1-205ENST00000451928 EHMT2Q96KQ7 1210 aa14.75□□□□□ -0.05
PDZK1-205ENST00000451928 SOGA1O94964 1423 aa14.75□□□□□ -0.05
PDZK1-205ENST00000451928 PELP1Q8IZL8 1130 aaKnown RBP14.74□□□□□ -0.05
PDZK1-205ENST00000451928 KIF21BO75037 1637 aa14.73□□□□□ -0.05
PDZK1-205ENST00000451928 CADPSQ9ULU8 1353 aa14.73□□□□□ -0.05
PDZK1-205ENST00000451928 CCER1Q8TC90 406 aaPredicted RBP14.72□□□□□ -0.05
PDZK1-205ENST00000451928 CEP164Q9UPV0 1460 aa14.71□□□□□ -0.06
PDZK1-205ENST00000451928 PDS5BQ9NTI5 1447 aa14.71□□□□□ -0.06
PDZK1-205ENST00000451928 KIF21AQ7Z4S6 1674 aa14.67□□□□□ -0.06
PDZK1-205ENST00000451928 THOC2Q8NI27 1593 aaKnown RBP14.67□□□□□ -0.06
PDZK1-205ENST00000451928 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.64□□□□□ -0.07
PDZK1-205ENST00000451928 FOXD1Q16676 465 aa14.64□□□□□ -0.07
PDZK1-205ENST00000451928 DNAJC5Q9H3Z4 198 aa14.63□□□□□ -0.07
PDZK1-205ENST00000451928 RUSC2Q8N2Y8 1516 aa14.62□□□□□ -0.07
PDZK1-205ENST00000451928 SYNJ1O43426 1573 aa14.62□□□□□ -0.07
PDZK1-205ENST00000451928 UBTFP17480 764 aaKnown RBP14.6□□□□□ -0.07
PDZK1-205ENST00000451928 CFTRP13569 1480 aa14.6□□□□□ -0.07
PDZK1-205ENST00000451928 VPS8Q8N3P4 1428 aa14.55□□□□□ -0.08
PDZK1-205ENST00000451928 SCAF1Q9H7N4 1312 aaKnown RBP14.55□□□□□ -0.08
PDZK1-205ENST00000451928 TOP2BQ02880 1626 aa14.54□□□□□ -0.08
PDZK1-205ENST00000451928 FANCD2Q9BXW9 1451 aa14.54□□□□□ -0.08
PDZK1-205ENST00000451928 MRC2Q9UBG0 1479 aa14.54□□□□□ -0.08
PDZK1-205ENST00000451928 CLIP1P30622 1438 aa14.54□□□□□ -0.08
PDZK1-205ENST00000451928 BIVM-ERCC5R4GMW8 1640 aa14.52□□□□□ -0.08
PDZK1-205ENST00000451928 DIEXFQ68CQ4 756 aaKnown RBP14.52□□□□□ -0.09
PDZK1-205ENST00000451928 WDR62O43379 1518 aa14.51□□□□□ -0.09
PDZK1-205ENST00000451928 ERICH3Q5RHP9 1530 aa14.5□□□□□ -0.09
PDZK1-205ENST00000451928 ACIN1Q9UKV3 1341 aaKnown RBP14.5□□□□□ -0.09
PDZK1-205ENST00000451928 CENPBP07199 599 aaPredicted RBP14.5□□□□□ -0.09
PDZK1-205ENST00000451928 ZNF316A6NFI3 1004 aaPredicted RBP14.44□□□□□ -0.1
PDZK1-205ENST00000451928 PRDM2Q13029 1718 aa14.43□□□□□ -0.1
PDZK1-205ENST00000451928 RAPGEF2Q9Y4G8 1499 aa14.43□□□□□ -0.1
PDZK1-205ENST00000451928 URB2Q14146 1524 aaKnown RBP14.41□□□□□ -0.1
PDZK1-205ENST00000451928 APLP2Q06481 763 aa14.41□□□□□ -0.1
PDZK1-205ENST00000451928 CLSPNQ9HAW4 1339 aa14.4□□□□□ -0.1
PDZK1-205ENST00000451928 PRXQ9BXM0 1461 aa14.4□□□□□ -0.1
PDZK1-205ENST00000451928 TTBK1Q5TCY1 1321 aaPredicted RBP14.36□□□□□ -0.11
PDZK1-205ENST00000451928 NEUROD1Q13562 356 aa14.35□□□□□ -0.11
PDZK1-205ENST00000451928 KIF27Q86VH2 1401 aa14.3□□□□□ -0.12
PDZK1-205ENST00000451928 ARAP1Q96P48 1450 aa14.29□□□□□ -0.12
PDZK1-205ENST00000451928 TOPBP1Q92547 1522 aa14.29□□□□□ -0.12
PDZK1-205ENST00000451928 CUX1P39880 1505 aa14.28□□□□□ -0.12
PDZK1-205ENST00000451928 HNRNPUL2Q1KMD3 747 aaKnown RBP14.26□□□□□ -0.13
PDZK1-205ENST00000451928 RRBP1Q9P2E9 1410 aaKnown RBP14.25□□□□□ -0.13
PDZK1-205ENST00000451928 GTF3C3Q9Y5Q9 886 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms