RNA–Protein interactions for RNA: ENST00000448282.6

SMIM8-205, Transcript of small integral membrane protein 8, humanhuman

TSL 1 (best)

Gene SMIM8, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM8-205ENST00000448282 NISCHQ9Y2I1 1504 aa27.48■■□□□ 1.99
SMIM8-205ENST00000448282 AEBP2Q6ZN18 517 aaPredicted RBP25.94■■□□□ 1.74
SMIM8-205ENST00000448282 CHIC1Q5VXU3 224 aa24.46■■□□□ 1.51
SMIM8-205ENST00000448282 CCDC180Q9P1Z9 1646 aa24.15■■□□□ 1.46
SMIM8-205ENST00000448282 ABCC9O60706 1549 aa23.09■■□□□ 1.29
SMIM8-205ENST00000448282 ZCCHC6Q5VYS8 1495 aaKnown RBP23.01■■□□□ 1.27
SMIM8-205ENST00000448282 DCAF1Q9Y4B6 1507 aa22.81■■□□□ 1.24
SMIM8-205ENST00000448282 DCAF8L2P0C7V8 631 aa22.79■■□□□ 1.24
SMIM8-205ENST00000448282 MYO15BQ96JP2 1530 aa22.71■■□□□ 1.23
SMIM8-205ENST00000448282 NACADO15069 1562 aa22.63■■□□□ 1.21
SMIM8-205ENST00000448282 RB1CC1Q8TDY2 1594 aa22.5■■□□□ 1.19
SMIM8-205ENST00000448282 SENP3Q9H4L4 574 aaPredicted RBP22.42■■□□□ 1.18
SMIM8-205ENST00000448282 SCRIBQ14160 1630 aa22.06■■□□□ 1.12
SMIM8-205ENST00000448282 SHROOM4Q9ULL8 1493 aa22.04■■□□□ 1.12
SMIM8-205ENST00000448282 PHF23Q9BUL5 403 aaPredicted RBP21.97■■□□□ 1.11
SMIM8-205ENST00000448282 UNC13AQ9UPW8 1703 aa21.78■■□□□ 1.08
SMIM8-205ENST00000448282 BICRAQ9NZM4 1560 aa21.7■■□□□ 1.06
SMIM8-205ENST00000448282 PABPN1Q86U42 306 aaKnown RBP eCLIP21.69■■□□□ 1.06
SMIM8-205ENST00000448282 BAZ1AQ9NRL2 1556 aaPredicted RBP21.29■■□□□ 1
SMIM8-205ENST00000448282 CECR2Q9BXF3 1484 aa21.29■■□□□ 1
SMIM8-205ENST00000448282 RSF1Q96T23 1441 aaPredicted RBP21.17■□□□□ 0.98
SMIM8-205ENST00000448282 SMARCA4P51532 1647 aa21.17■□□□□ 0.98
SMIM8-205ENST00000448282 MROH2BQ7Z745 1585 aa21.14■□□□□ 0.98
SMIM8-205ENST00000448282 EIF4G1Q04637 1599 aaKnown RBP21.14■□□□□ 0.97
SMIM8-205ENST00000448282 SUPT5HO00267 1087 aaKnown RBP21.09■□□□□ 0.97
SMIM8-205ENST00000448282 SMARCA2P51531 1590 aa20.98■□□□□ 0.95
SMIM8-205ENST00000448282 PEG3Q9GZU2 1588 aa20.97■□□□□ 0.95
SMIM8-205ENST00000448282 ATAD2BQ9ULI0 1458 aa20.94■□□□□ 0.94
SMIM8-205ENST00000448282 WIZO95785 1651 aa20.9■□□□□ 0.94
SMIM8-205ENST00000448282 NCAPD3P42695 1498 aa20.88■□□□□ 0.93
SMIM8-205ENST00000448282 CC2D2AQ9P2K1 1620 aa20.88■□□□□ 0.93
SMIM8-205ENST00000448282 BAZ1BQ9UIG0 1483 aaKnown RBP20.84■□□□□ 0.93
SMIM8-205ENST00000448282 FOXD1Q16676 465 aa20.84■□□□□ 0.93
SMIM8-205ENST00000448282 TOP2AP11388 1531 aaKnown RBP20.81■□□□□ 0.92
SMIM8-205ENST00000448282 HMGXB3Q12766 1538 aa20.81■□□□□ 0.92
SMIM8-205ENST00000448282 DNAJC5BQ9UF47 199 aa20.61■□□□□ 0.89
SMIM8-205ENST00000448282 CCDC88BA6NC98 1476 aa20.55■□□□□ 0.88
SMIM8-205ENST00000448282 CADPSQ9ULU8 1353 aa20.32■□□□□ 0.84
SMIM8-205ENST00000448282 CFTRP13569 1480 aa20.3■□□□□ 0.84
SMIM8-205ENST00000448282 POTEDQ86YR6 584 aa20.28■□□□□ 0.84
SMIM8-205ENST00000448282 LAMC3Q9Y6N6 1575 aa20.21■□□□□ 0.83
SMIM8-205ENST00000448282 PDS5BQ9NTI5 1447 aa20.13■□□□□ 0.81
SMIM8-205ENST00000448282 NESP48681 1621 aa20.11■□□□□ 0.81
SMIM8-205ENST00000448282 FANCD2Q9BXW9 1451 aa20.05■□□□□ 0.8
SMIM8-205ENST00000448282 PRDM2Q13029 1718 aa20.05■□□□□ 0.8
SMIM8-205ENST00000448282 CEP164Q9UPV0 1460 aa19.99■□□□□ 0.79
SMIM8-205ENST00000448282 WRNQ14191 1432 aaPredicted RBP eCLIP19.98■□□□□ 0.79
SMIM8-205ENST00000448282 TRIM41Q8WV44 630 aa19.96■□□□□ 0.79
SMIM8-205ENST00000448282 ERCC6Q03468 1493 aa19.93■□□□□ 0.78
SMIM8-205ENST00000448282 ABCC8Q09428 1581 aa19.91■□□□□ 0.78
SMIM8-205ENST00000448282 MSH5O43196 834 aa19.88■□□□□ 0.77
SMIM8-205ENST00000448282 MRC2Q9UBG0 1479 aa19.85■□□□□ 0.77
SMIM8-205ENST00000448282 KIF21AQ7Z4S6 1674 aa19.83■□□□□ 0.76
SMIM8-205ENST00000448282 CUX1P39880 1505 aa19.81■□□□□ 0.76
SMIM8-205ENST00000448282 TOP2BQ02880 1626 aa19.81■□□□□ 0.76
SMIM8-205ENST00000448282 DNMBPQ6XZF7 1577 aa19.81■□□□□ 0.76
SMIM8-205ENST00000448282 SYNJ1O43426 1573 aa19.8■□□□□ 0.76
SMIM8-205ENST00000448282 TOPBP1Q92547 1522 aa19.78■□□□□ 0.76
SMIM8-205ENST00000448282 URB2Q14146 1524 aaKnown RBP19.77■□□□□ 0.76
SMIM8-205ENST00000448282 BIVM-ERCC5R4GMW8 1640 aa19.77■□□□□ 0.76
SMIM8-205ENST00000448282 WDR62O43379 1518 aa19.72■□□□□ 0.75
SMIM8-205ENST00000448282 FGD5Q6ZNL6 1462 aa19.69■□□□□ 0.74
SMIM8-205ENST00000448282 THOC2Q8NI27 1593 aaKnown RBP19.67■□□□□ 0.74
SMIM8-205ENST00000448282 POLA1P09884 1462 aaPredicted RBP19.65■□□□□ 0.74
SMIM8-205ENST00000448282 SOGA1O94964 1423 aa19.62■□□□□ 0.73
SMIM8-205ENST00000448282 EEA1Q15075 1411 aa19.59■□□□□ 0.73
SMIM8-205ENST00000448282 IFT140Q96RY7 1462 aa19.57■□□□□ 0.72
SMIM8-205ENST00000448282 KIF27Q86VH2 1401 aa19.55■□□□□ 0.72
SMIM8-205ENST00000448282 ABCA10Q8WWZ4 1543 aa19.54■□□□□ 0.72
SMIM8-205ENST00000448282 RAD54L2Q9Y4B4 1467 aa19.54■□□□□ 0.72
SMIM8-205ENST00000448282 CUX2O14529 1486 aa19.53■□□□□ 0.72
SMIM8-205ENST00000448282 TARBP1Q13395 1621 aaKnown RBP19.47■□□□□ 0.71
SMIM8-205ENST00000448282 FAM9AQ8IZU1 332 aaPredicted RBP19.46■□□□□ 0.71
SMIM8-205ENST00000448282 CSRNP3Q8WYN3 585 aa19.45■□□□□ 0.7
SMIM8-205ENST00000448282 WDR97A6NE52 1622 aa19.44■□□□□ 0.7
SMIM8-205ENST00000448282 PIAS4Q8N2W9 510 aaPredicted RBP19.42■□□□□ 0.7
SMIM8-205ENST00000448282 TDRD9Q8NDG6 1382 aaKnown RBP19.42■□□□□ 0.7
SMIM8-205ENST00000448282 RUSC2Q8N2Y8 1516 aa19.41■□□□□ 0.7
SMIM8-205ENST00000448282 GAPVD1Q14C86 1478 aa19.4■□□□□ 0.7
SMIM8-205ENST00000448282 ABCA5Q8WWZ7 1642 aa19.36■□□□□ 0.69
SMIM8-205ENST00000448282 IGF1RP08069 1367 aa19.35■□□□□ 0.69
SMIM8-205ENST00000448282 ZNF608Q9ULD9 1512 aaPredicted RBP19.34■□□□□ 0.69
SMIM8-205ENST00000448282 GRIN2BQ13224 1484 aa19.34■□□□□ 0.69
SMIM8-205ENST00000448282 ERICH3Q5RHP9 1530 aa19.33■□□□□ 0.68
SMIM8-205ENST00000448282 AQRO60306 1485 aaKnown RBP eCLIP19.33■□□□□ 0.68
SMIM8-205ENST00000448282 EIF4G3O43432 1585 aaKnown RBP19.28■□□□□ 0.68
SMIM8-205ENST00000448282 CARMIL1Q5VZK9 1371 aa19.27■□□□□ 0.68
SMIM8-205ENST00000448282 PRXQ9BXM0 1461 aa19.27■□□□□ 0.67
SMIM8-205ENST00000448282 CUL7Q14999 1698 aa19.24■□□□□ 0.67
SMIM8-205ENST00000448282 KIF21BO75037 1637 aa19.24■□□□□ 0.67
SMIM8-205ENST00000448282 GOLGA3Q08378 1498 aa19.23■□□□□ 0.67
SMIM8-205ENST00000448282 FHAD1B1AJZ9 1412 aa19.22■□□□□ 0.67
SMIM8-205ENST00000448282 MAGI1Q96QZ7 1491 aaPredicted RBP19.22■□□□□ 0.67
SMIM8-205ENST00000448282 RAPGEF2Q9Y4G8 1499 aa19.22■□□□□ 0.67
SMIM8-205ENST00000448282 PBRM1Q86U86 1689 aa19.2■□□□□ 0.66
SMIM8-205ENST00000448282 SNAPC4Q5SXM2 1469 aa19.18■□□□□ 0.66
SMIM8-205ENST00000448282 UBTFP17480 764 aaKnown RBP19.16■□□□□ 0.66
SMIM8-205ENST00000448282 LOC105371045A0A1W2PR82 267 aa19.15■□□□□ 0.66
SMIM8-205ENST00000448282 ADAMTS12P58397 1594 aa19.15■□□□□ 0.66
SMIM8-205ENST00000448282 PLPPR3Q6T4P5 718 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms