RNA–Protein interactions for RNA: ENST00000447539.5

CARF-218, Transcript of calcium responsive transcription factor, humanhuman

TSL 4

Gene CARF, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARF-218ENST00000447539 AEBP2Q6ZN18 517 aaPredicted RBP18.99■□□□□ 0.63
CARF-218ENST00000447539 CHIC1Q5VXU3 224 aa18.28■□□□□ 0.52
CARF-218ENST00000447539 NISCHQ9Y2I1 1504 aa16.71■□□□□ 0.27
CARF-218ENST00000447539 PHF23Q9BUL5 403 aaPredicted RBP16.18■□□□□ 0.18
CARF-218ENST00000447539 SENP3Q9H4L4 574 aaPredicted RBP15.91■□□□□ 0.14
CARF-218ENST00000447539 CCDC180Q9P1Z9 1646 aa15.03■□□□□ -0
CARF-218ENST00000447539 FOXD1Q16676 465 aa14.93□□□□□ -0.02
CARF-218ENST00000447539 ABCC9O60706 1549 aa14.72□□□□□ -0.05
CARF-218ENST00000447539 PLPPR3Q6T4P5 718 aa14.68□□□□□ -0.06
CARF-218ENST00000447539 PPP6R1Q9UPN7 881 aa14.34□□□□□ -0.11
CARF-218ENST00000447539 ADRA2BP18089 450 aa14.28□□□□□ -0.12
CARF-218ENST00000447539 RB1CC1Q8TDY2 1594 aa14.17□□□□□ -0.14
CARF-218ENST00000447539 NACADO15069 1562 aa14.12□□□□□ -0.15
CARF-218ENST00000447539 MYO15BQ96JP2 1530 aa14.04□□□□□ -0.16
CARF-218ENST00000447539 PIAS4Q8N2W9 510 aaPredicted RBP13.96□□□□□ -0.17
CARF-218ENST00000447539 ZCCHC6Q5VYS8 1495 aaKnown RBP13.93□□□□□ -0.18
CARF-218ENST00000447539 DCAF1Q9Y4B6 1507 aa13.9□□□□□ -0.19
CARF-218ENST00000447539 UNC13AQ9UPW8 1703 aa13.81□□□□□ -0.2
CARF-218ENST00000447539 DCAF8L2P0C7V8 631 aa13.8□□□□□ -0.2
CARF-218ENST00000447539 BICRAQ9NZM4 1560 aa13.74□□□□□ -0.21
CARF-218ENST00000447539 SHROOM4Q9ULL8 1493 aa13.7□□□□□ -0.22
CARF-218ENST00000447539 MSH5O43196 834 aa13.65□□□□□ -0.22
CARF-218ENST00000447539 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
CARF-218ENST00000447539 SCRIBQ14160 1630 aa13.6□□□□□ -0.23
CARF-218ENST00000447539 DNAJC5BQ9UF47 199 aa13.59□□□□□ -0.23
CARF-218ENST00000447539 EIF4G1Q04637 1599 aaKnown RBP13.4□□□□□ -0.26
CARF-218ENST00000447539 CC2D2AQ9P2K1 1620 aa13.35□□□□□ -0.27
CARF-218ENST00000447539 CECR2Q9BXF3 1484 aa13.28□□□□□ -0.28
CARF-218ENST00000447539 MAPK8IP2Q13387 824 aaPredicted RBP13.03□□□□□ -0.32
CARF-218ENST00000447539 SMARCA4P51532 1647 aa13.02□□□□□ -0.32
CARF-218ENST00000447539 NCAPD3P42695 1498 aa13.01□□□□□ -0.33
CARF-218ENST00000447539 PPP4R3CPQ6ZMV5 832 aa13□□□□□ -0.33
CARF-218ENST00000447539 BAZ1AQ9NRL2 1556 aaPredicted RBP12.99□□□□□ -0.33
CARF-218ENST00000447539 SMARCA2P51531 1590 aa12.98□□□□□ -0.33
CARF-218ENST00000447539 HMGXB3Q12766 1538 aa12.98□□□□□ -0.33
CARF-218ENST00000447539 ATAD2BQ9ULI0 1458 aa12.97□□□□□ -0.33
CARF-218ENST00000447539 PEG3Q9GZU2 1588 aa12.95□□□□□ -0.34
CARF-218ENST00000447539 POTEDQ86YR6 584 aa12.92□□□□□ -0.34
CARF-218ENST00000447539 BAZ1BQ9UIG0 1483 aaKnown RBP12.86□□□□□ -0.35
CARF-218ENST00000447539 MROH2BQ7Z745 1585 aa12.85□□□□□ -0.35
CARF-218ENST00000447539 SCAF1Q9H7N4 1312 aaKnown RBP12.8□□□□□ -0.36
CARF-218ENST00000447539 DMRT2Q9Y5R5 561 aa12.74□□□□□ -0.37
CARF-218ENST00000447539 CUX2O14529 1486 aa12.73□□□□□ -0.37
CARF-218ENST00000447539 ERCC6Q03468 1493 aa12.72□□□□□ -0.37
CARF-218ENST00000447539 LAMC3Q9Y6N6 1575 aa12.72□□□□□ -0.37
CARF-218ENST00000447539 WIZO95785 1651 aa12.69□□□□□ -0.38
CARF-218ENST00000447539 NESP48681 1621 aa12.69□□□□□ -0.38
CARF-218ENST00000447539 THOC2Q8NI27 1593 aaKnown RBP12.64□□□□□ -0.39
CARF-218ENST00000447539 RSF1Q96T23 1441 aaPredicted RBP12.63□□□□□ -0.39
CARF-218ENST00000447539 KCNA4P22459 653 aa12.63□□□□□ -0.39
CARF-218ENST00000447539 TOP2AP11388 1531 aaKnown RBP12.62□□□□□ -0.39
CARF-218ENST00000447539 CNKSR2Q8WXI2 1034 aa12.6□□□□□ -0.39
CARF-218ENST00000447539 PDS5BQ9NTI5 1447 aa12.59□□□□□ -0.39
CARF-218ENST00000447539 CADPSQ9ULU8 1353 aa12.58□□□□□ -0.4
CARF-218ENST00000447539 KIF21AQ7Z4S6 1674 aa12.57□□□□□ -0.4
CARF-218ENST00000447539 CFTRP13569 1480 aa12.51□□□□□ -0.41
CARF-218ENST00000447539 MRC2Q9UBG0 1479 aa12.51□□□□□ -0.41
CARF-218ENST00000447539 WDR62O43379 1518 aa12.5□□□□□ -0.41
CARF-218ENST00000447539 CEP164Q9UPV0 1460 aa12.48□□□□□ -0.41
CARF-218ENST00000447539 NPM3O75607 178 aaKnown RBP12.47□□□□□ -0.41
CARF-218ENST00000447539 NCBP3Q53F19 620 aaKnown RBP12.47□□□□□ -0.41
CARF-218ENST00000447539 FANCD2Q9BXW9 1451 aa12.46□□□□□ -0.42
CARF-218ENST00000447539 PRDM2Q13029 1718 aa12.44□□□□□ -0.42
CARF-218ENST00000447539 HOXD11P31277 338 aaPredicted RBP12.43□□□□□ -0.42
CARF-218ENST00000447539 DNAJC5Q9H3Z4 198 aa12.43□□□□□ -0.42
CARF-218ENST00000447539 RNF216Q9NWF9 866 aaPredicted RBP12.4□□□□□ -0.42
CARF-218ENST00000447539 CCDC88BA6NC98 1476 aa12.39□□□□□ -0.43
CARF-218ENST00000447539 URB2Q14146 1524 aaKnown RBP12.35□□□□□ -0.43
CARF-218ENST00000447539 ABCC8Q09428 1581 aa12.26□□□□□ -0.45
CARF-218ENST00000447539 DNMBPQ6XZF7 1577 aa12.25□□□□□ -0.45
CARF-218ENST00000447539 TOPBP1Q92547 1522 aa12.24□□□□□ -0.45
CARF-218ENST00000447539 IFT140Q96RY7 1462 aa12.23□□□□□ -0.45
CARF-218ENST00000447539 EIF4G3O43432 1585 aaKnown RBP12.15□□□□□ -0.46
CARF-218ENST00000447539 DCAF8L1A6NGE4 600 aa12.15□□□□□ -0.46
CARF-218ENST00000447539 TARBP1Q13395 1621 aaKnown RBP12.15□□□□□ -0.47
CARF-218ENST00000447539 ZNF608Q9ULD9 1512 aaPredicted RBP12.14□□□□□ -0.47
CARF-218ENST00000447539 POLA1P09884 1462 aaPredicted RBP12.13□□□□□ -0.47
CARF-218ENST00000447539 WDR97A6NE52 1622 aa12.12□□□□□ -0.47
CARF-218ENST00000447539 CUX1P39880 1505 aa12.08□□□□□ -0.48
CARF-218ENST00000447539 FGD5Q6ZNL6 1462 aa12.07□□□□□ -0.48
CARF-218ENST00000447539 OSCARQ8IYS5 282 aa12.03□□□□□ -0.48
CARF-218ENST00000447539 SOGA1O94964 1423 aa12.02□□□□□ -0.49
CARF-218ENST00000447539 RAD54L2Q9Y4B4 1467 aa12.02□□□□□ -0.49
CARF-218ENST00000447539 SUPT5HO00267 1087 aaKnown RBP12.01□□□□□ -0.49
CARF-218ENST00000447539 AQRO60306 1485 aaKnown RBP eCLIP12.01□□□□□ -0.49
CARF-218ENST00000447539 CHD1O14646 1710 aa12□□□□□ -0.49
CARF-218ENST00000447539 BIVM-ERCC5R4GMW8 1640 aa11.97□□□□□ -0.49
CARF-218ENST00000447539 ABCA10Q8WWZ4 1543 aa11.97□□□□□ -0.49
CARF-218ENST00000447539 MAGI1Q96QZ7 1491 aaPredicted RBP11.97□□□□□ -0.49
CARF-218ENST00000447539 ABCA5Q8WWZ7 1642 aa11.97□□□□□ -0.49
CARF-218ENST00000447539 GRIN2BQ13224 1484 aa11.96□□□□□ -0.49
CARF-218ENST00000447539 SNAPC4Q5SXM2 1469 aa11.96□□□□□ -0.49
CARF-218ENST00000447539 TOP2BQ02880 1626 aa11.96□□□□□ -0.5
CARF-218ENST00000447539 RIMBP3CA6NJZ7 1639 aa11.95□□□□□ -0.5
CARF-218ENST00000447539 RIMBP3BA6NNM3 1639 aa11.95□□□□□ -0.5
CARF-218ENST00000447539 RIMBP3Q9UFD9 1639 aa11.95□□□□□ -0.5
CARF-218ENST00000447539 TDRD9Q8NDG6 1382 aaKnown RBP11.94□□□□□ -0.5
CARF-218ENST00000447539 ARHGEF11O15085 1522 aa11.94□□□□□ -0.5
CARF-218ENST00000447539 PBRM1Q86U86 1689 aa11.94□□□□□ -0.5
CARF-218ENST00000447539 WRNQ14191 1432 aaPredicted RBP eCLIP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms