RNA–Protein interactions for RNA: ENST00000446933.1

KNOP1P3-201, Transcript of lysine rich nucleolar protein 1 pseudogene 3, humanhuman

BASIC

Gene KNOP1P3, Length 426 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1P3-201ENST00000446933 CHIC1Q5VXU3 224 aa13.24□□□□□ -0.29
KNOP1P3-201ENST00000446933 AEBP2Q6ZN18 517 aaPredicted RBP13.2□□□□□ -0.3
KNOP1P3-201ENST00000446933 NISCHQ9Y2I1 1504 aa12.47□□□□□ -0.41
KNOP1P3-201ENST00000446933 PHF23Q9BUL5 403 aaPredicted RBP11.66□□□□□ -0.54
KNOP1P3-201ENST00000446933 SENP3Q9H4L4 574 aaPredicted RBP11.17□□□□□ -0.62
KNOP1P3-201ENST00000446933 CCDC180Q9P1Z9 1646 aa11.1□□□□□ -0.63
KNOP1P3-201ENST00000446933 PLPPR3Q6T4P5 718 aa10.89□□□□□ -0.67
KNOP1P3-201ENST00000446933 ABCC9O60706 1549 aa10.62□□□□□ -0.71
KNOP1P3-201ENST00000446933 MYO15BQ96JP2 1530 aa10.49□□□□□ -0.73
KNOP1P3-201ENST00000446933 DCAF1Q9Y4B6 1507 aa10.43□□□□□ -0.74
KNOP1P3-201ENST00000446933 NACADO15069 1562 aa10.43□□□□□ -0.74
KNOP1P3-201ENST00000446933 ZCCHC6Q5VYS8 1495 aaKnown RBP10.39□□□□□ -0.75
KNOP1P3-201ENST00000446933 RB1CC1Q8TDY2 1594 aa10.38□□□□□ -0.75
KNOP1P3-201ENST00000446933 FOXD1Q16676 465 aa10.29□□□□□ -0.76
KNOP1P3-201ENST00000446933 DCAF8L2P0C7V8 631 aa10.16□□□□□ -0.78
KNOP1P3-201ENST00000446933 PPP6R1Q9UPN7 881 aa10.15□□□□□ -0.78
KNOP1P3-201ENST00000446933 ADRA2BP18089 450 aa10.14□□□□□ -0.79
KNOP1P3-201ENST00000446933 UNC13AQ9UPW8 1703 aa10.12□□□□□ -0.79
KNOP1P3-201ENST00000446933 SHROOM4Q9ULL8 1493 aa10.1□□□□□ -0.79
KNOP1P3-201ENST00000446933 BICRAQ9NZM4 1560 aa10.05□□□□□ -0.8
KNOP1P3-201ENST00000446933 SCRIBQ14160 1630 aa9.96□□□□□ -0.82
KNOP1P3-201ENST00000446933 PABPN1Q86U42 306 aaKnown RBP eCLIP9.9□□□□□ -0.82
KNOP1P3-201ENST00000446933 EIF4G1Q04637 1599 aaKnown RBP9.76□□□□□ -0.85
KNOP1P3-201ENST00000446933 KCNA4P22459 653 aa9.76□□□□□ -0.85
KNOP1P3-201ENST00000446933 PIAS4Q8N2W9 510 aaPredicted RBP9.76□□□□□ -0.85
KNOP1P3-201ENST00000446933 DNAJC5BQ9UF47 199 aa9.73□□□□□ -0.85
KNOP1P3-201ENST00000446933 CC2D2AQ9P2K1 1620 aa9.68□□□□□ -0.86
KNOP1P3-201ENST00000446933 BAZ1AQ9NRL2 1556 aaPredicted RBP9.67□□□□□ -0.86
KNOP1P3-201ENST00000446933 PEG3Q9GZU2 1588 aa9.65□□□□□ -0.86
KNOP1P3-201ENST00000446933 SMARCA4P51532 1647 aa9.64□□□□□ -0.87
KNOP1P3-201ENST00000446933 NCAPD3P42695 1498 aa9.63□□□□□ -0.87
KNOP1P3-201ENST00000446933 CECR2Q9BXF3 1484 aa9.62□□□□□ -0.87
KNOP1P3-201ENST00000446933 SMARCA2P51531 1590 aa9.6□□□□□ -0.87
KNOP1P3-201ENST00000446933 PPP4R3CPQ6ZMV5 832 aa9.6□□□□□ -0.87
KNOP1P3-201ENST00000446933 ATAD2BQ9ULI0 1458 aa9.58□□□□□ -0.88
KNOP1P3-201ENST00000446933 HMGXB3Q12766 1538 aa9.57□□□□□ -0.88
KNOP1P3-201ENST00000446933 MROH2BQ7Z745 1585 aa9.54□□□□□ -0.88
KNOP1P3-201ENST00000446933 RSF1Q96T23 1441 aaPredicted RBP9.49□□□□□ -0.89
KNOP1P3-201ENST00000446933 BAZ1BQ9UIG0 1483 aaKnown RBP9.47□□□□□ -0.89
KNOP1P3-201ENST00000446933 NCBP3Q53F19 620 aaKnown RBP9.46□□□□□ -0.9
KNOP1P3-201ENST00000446933 WIZO95785 1651 aa9.42□□□□□ -0.9
KNOP1P3-201ENST00000446933 MSH5O43196 834 aa9.4□□□□□ -0.9
KNOP1P3-201ENST00000446933 TOP2AP11388 1531 aaKnown RBP9.38□□□□□ -0.91
KNOP1P3-201ENST00000446933 EHMT2Q96KQ7 1210 aa9.37□□□□□ -0.91
KNOP1P3-201ENST00000446933 LAMC3Q9Y6N6 1575 aa9.34□□□□□ -0.91
KNOP1P3-201ENST00000446933 NPM3O75607 178 aaKnown RBP9.33□□□□□ -0.92
KNOP1P3-201ENST00000446933 SLC4A1APQ9BWU0 796 aaKnown RBP9.33□□□□□ -0.92
KNOP1P3-201ENST00000446933 SCAF1Q9H7N4 1312 aaKnown RBP9.31□□□□□ -0.92
KNOP1P3-201ENST00000446933 CADPSQ9ULU8 1353 aa9.3□□□□□ -0.92
KNOP1P3-201ENST00000446933 CNKSR2Q8WXI2 1034 aa9.3□□□□□ -0.92
KNOP1P3-201ENST00000446933 CFTRP13569 1480 aa9.28□□□□□ -0.92
KNOP1P3-201ENST00000446933 CCDC88BA6NC98 1476 aa9.26□□□□□ -0.93
KNOP1P3-201ENST00000446933 PDS5BQ9NTI5 1447 aa9.25□□□□□ -0.93
KNOP1P3-201ENST00000446933 NESP48681 1621 aa9.22□□□□□ -0.93
KNOP1P3-201ENST00000446933 PRDM2Q13029 1718 aa9.22□□□□□ -0.93
KNOP1P3-201ENST00000446933 CSRNP3Q8WYN3 585 aa9.21□□□□□ -0.94
KNOP1P3-201ENST00000446933 CUX2O14529 1486 aa9.17□□□□□ -0.94
KNOP1P3-201ENST00000446933 ERCC6Q03468 1493 aa9.16□□□□□ -0.94
KNOP1P3-201ENST00000446933 KIF21AQ7Z4S6 1674 aa9.15□□□□□ -0.94
KNOP1P3-201ENST00000446933 FANCD2Q9BXW9 1451 aa9.15□□□□□ -0.95
KNOP1P3-201ENST00000446933 THOC2Q8NI27 1593 aaKnown RBP9.14□□□□□ -0.95
KNOP1P3-201ENST00000446933 CEP164Q9UPV0 1460 aa9.13□□□□□ -0.95
KNOP1P3-201ENST00000446933 WDR62O43379 1518 aa9.12□□□□□ -0.95
KNOP1P3-201ENST00000446933 SUPT5HO00267 1087 aaKnown RBP9.12□□□□□ -0.95
KNOP1P3-201ENST00000446933 MRC2Q9UBG0 1479 aa9.12□□□□□ -0.95
KNOP1P3-201ENST00000446933 ABCC8Q09428 1581 aa9.12□□□□□ -0.95
KNOP1P3-201ENST00000446933 MAPK8IP2Q13387 824 aaPredicted RBP9.06□□□□□ -0.96
KNOP1P3-201ENST00000446933 RNF216Q9NWF9 866 aaPredicted RBP9.05□□□□□ -0.96
KNOP1P3-201ENST00000446933 URB2Q14146 1524 aaKnown RBP9.05□□□□□ -0.96
KNOP1P3-201ENST00000446933 DNMBPQ6XZF7 1577 aa9.03□□□□□ -0.96
KNOP1P3-201ENST00000446933 TOPBP1Q92547 1522 aa9.01□□□□□ -0.97
KNOP1P3-201ENST00000446933 ZBTB22O15209 634 aa9□□□□□ -0.97
KNOP1P3-201ENST00000446933 DMRT2Q9Y5R5 561 aa8.98□□□□□ -0.97
KNOP1P3-201ENST00000446933 WDR97A6NE52 1622 aa8.98□□□□□ -0.97
KNOP1P3-201ENST00000446933 IFT140Q96RY7 1462 aa8.97□□□□□ -0.97
KNOP1P3-201ENST00000446933 CUX1P39880 1505 aa8.95□□□□□ -0.98
KNOP1P3-201ENST00000446933 TARBP1Q13395 1621 aaKnown RBP8.95□□□□□ -0.98
KNOP1P3-201ENST00000446933 HOXD11P31277 338 aaPredicted RBP8.95□□□□□ -0.98
KNOP1P3-201ENST00000446933 TOP2BQ02880 1626 aa8.94□□□□□ -0.98
KNOP1P3-201ENST00000446933 BIVM-ERCC5R4GMW8 1640 aa8.94□□□□□ -0.98
KNOP1P3-201ENST00000446933 POLA1P09884 1462 aaPredicted RBP8.94□□□□□ -0.98
KNOP1P3-201ENST00000446933 WRNQ14191 1432 aaPredicted RBP eCLIP8.93□□□□□ -0.98
KNOP1P3-201ENST00000446933 FOXD4L1Q9NU39 408 aa8.91□□□□□ -0.98
KNOP1P3-201ENST00000446933 SOGA1O94964 1423 aa8.9□□□□□ -0.98
KNOP1P3-201ENST00000446933 ABCA10Q8WWZ4 1543 aa8.9□□□□□ -0.99
KNOP1P3-201ENST00000446933 FGD5Q6ZNL6 1462 aa8.89□□□□□ -0.99
KNOP1P3-201ENST00000446933 SYNJ1O43426 1573 aa8.87□□□□□ -0.99
KNOP1P3-201ENST00000446933 ZNF608Q9ULD9 1512 aaPredicted RBP8.85□□□□□ -0.99
KNOP1P3-201ENST00000446933 EIF4G3O43432 1585 aaKnown RBP8.84□□□□□ -0.99
KNOP1P3-201ENST00000446933 RAD54L2Q9Y4B4 1467 aa8.83□□□□□ -1
KNOP1P3-201ENST00000446933 ABCA5Q8WWZ7 1642 aa8.83□□□□□ -1
KNOP1P3-201ENST00000446933 AQRO60306 1485 aaKnown RBP eCLIP8.82□□□□□ -1
KNOP1P3-201ENST00000446933 MAGI1Q96QZ7 1491 aaPredicted RBP8.82□□□□□ -1
KNOP1P3-201ENST00000446933 GRIN2BQ13224 1484 aa8.81□□□□□ -1
KNOP1P3-201ENST00000446933 GAPVD1Q14C86 1478 aa8.81□□□□□ -1
KNOP1P3-201ENST00000446933 ERICH3Q5RHP9 1530 aa8.8□□□□□ -1
KNOP1P3-201ENST00000446933 DNAJC5Q9H3Z4 198 aa8.8□□□□□ -1
KNOP1P3-201ENST00000446933 TDRD9Q8NDG6 1382 aaKnown RBP8.79□□□□□ -1
KNOP1P3-201ENST00000446933 PBRM1Q86U86 1689 aa8.76□□□□□ -1.01
KNOP1P3-201ENST00000446933 OSCARQ8IYS5 282 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms