RNA–Protein interactions for RNA: ENST00000439861.5

SYN2-203, Transcript of synapsin II, humanhuman

TSL 2

Gene SYN2, Length 2,128 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-203ENST00000439861 NISCHQ9Y2I1 1504 aa20.34■□□□□ 0.85
SYN2-203ENST00000439861 CCDC180Q9P1Z9 1646 aa17.5■□□□□ 0.39
SYN2-203ENST00000439861 ZCCHC6Q5VYS8 1495 aaKnown RBP17.14■□□□□ 0.33
SYN2-203ENST00000439861 SHROOM4Q9ULL8 1493 aa16.98■□□□□ 0.31
SYN2-203ENST00000439861 DCAF8L2P0C7V8 631 aa16.84■□□□□ 0.29
SYN2-203ENST00000439861 DCAF1Q9Y4B6 1507 aa16.71■□□□□ 0.27
SYN2-203ENST00000439861 ABCC9O60706 1549 aa16.47■□□□□ 0.23
SYN2-203ENST00000439861 SUPT5HO00267 1087 aaKnown RBP16.45■□□□□ 0.22
SYN2-203ENST00000439861 MYO15BQ96JP2 1530 aa16.37■□□□□ 0.21
SYN2-203ENST00000439861 SCRIBQ14160 1630 aa16.29■□□□□ 0.2
SYN2-203ENST00000439861 NACADO15069 1562 aa16.24■□□□□ 0.19
SYN2-203ENST00000439861 RB1CC1Q8TDY2 1594 aa16.04■□□□□ 0.16
SYN2-203ENST00000439861 CHIC1Q5VXU3 224 aa16.03■□□□□ 0.16
SYN2-203ENST00000439861 RSF1Q96T23 1441 aaPredicted RBP15.93■□□□□ 0.14
SYN2-203ENST00000439861 CECR2Q9BXF3 1484 aa15.89■□□□□ 0.13
SYN2-203ENST00000439861 UNC13AQ9UPW8 1703 aa15.88■□□□□ 0.13
SYN2-203ENST00000439861 MROH2BQ7Z745 1585 aa15.8■□□□□ 0.12
SYN2-203ENST00000439861 HRCP23327 699 aa15.71■□□□□ 0.11
SYN2-203ENST00000439861 WIZO95785 1651 aa15.7■□□□□ 0.1
SYN2-203ENST00000439861 BICRAQ9NZM4 1560 aa15.67■□□□□ 0.1
SYN2-203ENST00000439861 PABPN1Q86U42 306 aaKnown RBP eCLIP15.65■□□□□ 0.1
SYN2-203ENST00000439861 BAZ1AQ9NRL2 1556 aaPredicted RBP15.63■□□□□ 0.09
SYN2-203ENST00000439861 SMARCA4P51532 1647 aa15.58■□□□□ 0.08
SYN2-203ENST00000439861 PCGF6Q9BYE7 350 aa15.58■□□□□ 0.08
SYN2-203ENST00000439861 LOC105371045A0A1W2PR82 267 aa15.5■□□□□ 0.07
SYN2-203ENST00000439861 TOP2AP11388 1531 aaKnown RBP15.43■□□□□ 0.06
SYN2-203ENST00000439861 SMARCA2P51531 1590 aa15.35■□□□□ 0.05
SYN2-203ENST00000439861 EIF4G1Q04637 1599 aaKnown RBP15.35■□□□□ 0.05
SYN2-203ENST00000439861 CCDC88BA6NC98 1476 aa15.35■□□□□ 0.05
SYN2-203ENST00000439861 TRIM41Q8WV44 630 aa15.35■□□□□ 0.05
SYN2-203ENST00000439861 TRIM26Q12899 539 aaPredicted RBP15.34■□□□□ 0.05
SYN2-203ENST00000439861 PEG3Q9GZU2 1588 aa15.32■□□□□ 0.04
SYN2-203ENST00000439861 ATAD2BQ9ULI0 1458 aa15.26■□□□□ 0.03
SYN2-203ENST00000439861 PPARGC1BQ86YN6 1023 aaKnown RBP15.26■□□□□ 0.03
SYN2-203ENST00000439861 FAM9AQ8IZU1 332 aaPredicted RBP15.2■□□□□ 0.02
SYN2-203ENST00000439861 ABCC8Q09428 1581 aa15.19■□□□□ 0.02
SYN2-203ENST00000439861 BAZ1BQ9UIG0 1483 aaKnown RBP15.17■□□□□ 0.02
SYN2-203ENST00000439861 ZEB1P37275 1124 aaPredicted RBP15.1■□□□□ 0.01
SYN2-203ENST00000439861 EHMT2Q96KQ7 1210 aa15.06■□□□□ 0
SYN2-203ENST00000439861 NCAPD3P42695 1498 aa15.04■□□□□ -0
SYN2-203ENST00000439861 HMGXB3Q12766 1538 aa15□□□□□ -0.01
SYN2-203ENST00000439861 SOGA1O94964 1423 aa14.96□□□□□ -0.02
SYN2-203ENST00000439861 WRNQ14191 1432 aaPredicted RBP eCLIP14.96□□□□□ -0.02
SYN2-203ENST00000439861 SYNJ1O43426 1573 aa14.94□□□□□ -0.02
SYN2-203ENST00000439861 RUSC2Q8N2Y8 1516 aa14.93□□□□□ -0.02
SYN2-203ENST00000439861 CC2D2AQ9P2K1 1620 aa14.87□□□□□ -0.03
SYN2-203ENST00000439861 CFTRP13569 1480 aa14.8□□□□□ -0.04
SYN2-203ENST00000439861 CSRNP3Q8WYN3 585 aa14.8□□□□□ -0.04
SYN2-203ENST00000439861 EEA1Q15075 1411 aa14.78□□□□□ -0.04
SYN2-203ENST00000439861 TOP2BQ02880 1626 aa14.78□□□□□ -0.04
SYN2-203ENST00000439861 BIVM-ERCC5R4GMW8 1640 aa14.75□□□□□ -0.05
SYN2-203ENST00000439861 CUX1P39880 1505 aa14.73□□□□□ -0.05
SYN2-203ENST00000439861 PRDM2Q13029 1718 aa14.71□□□□□ -0.06
SYN2-203ENST00000439861 TNIKQ9UKE5 1360 aa14.69□□□□□ -0.06
SYN2-203ENST00000439861 CADPSQ9ULU8 1353 aa14.69□□□□□ -0.06
SYN2-203ENST00000439861 CEP162Q5TB80 1403 aa14.68□□□□□ -0.06
SYN2-203ENST00000439861 GOLGA3Q08378 1498 aa14.67□□□□□ -0.06
SYN2-203ENST00000439861 UBTFP17480 764 aaKnown RBP14.66□□□□□ -0.06
SYN2-203ENST00000439861 KIF21BO75037 1637 aa14.65□□□□□ -0.06
SYN2-203ENST00000439861 CEP164Q9UPV0 1460 aa14.63□□□□□ -0.07
SYN2-203ENST00000439861 CCER1Q8TC90 406 aaPredicted RBP14.63□□□□□ -0.07
SYN2-203ENST00000439861 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.62□□□□□ -0.07
SYN2-203ENST00000439861 DNAJC5BQ9UF47 199 aa14.62□□□□□ -0.07
SYN2-203ENST00000439861 RAPGEF2Q9Y4G8 1499 aa14.62□□□□□ -0.07
SYN2-203ENST00000439861 NESP48681 1621 aa14.59□□□□□ -0.07
SYN2-203ENST00000439861 FANCD2Q9BXW9 1451 aa14.55□□□□□ -0.08
SYN2-203ENST00000439861 PRXQ9BXM0 1461 aa14.53□□□□□ -0.08
SYN2-203ENST00000439861 KIF27Q86VH2 1401 aa14.51□□□□□ -0.09
SYN2-203ENST00000439861 FGD5Q6ZNL6 1462 aa14.51□□□□□ -0.09
SYN2-203ENST00000439861 CLIP1P30622 1438 aa14.48□□□□□ -0.09
SYN2-203ENST00000439861 SCAF1Q9H7N4 1312 aaKnown RBP14.48□□□□□ -0.09
SYN2-203ENST00000439861 TTBK1Q5TCY1 1321 aaPredicted RBP14.47□□□□□ -0.09
SYN2-203ENST00000439861 ERICH3Q5RHP9 1530 aa14.47□□□□□ -0.09
SYN2-203ENST00000439861 CUX2O14529 1486 aa14.47□□□□□ -0.09
SYN2-203ENST00000439861 RANGAP1P46060 587 aaPredicted RBP14.46□□□□□ -0.09
SYN2-203ENST00000439861 LAMC3Q9Y6N6 1575 aa14.45□□□□□ -0.1
SYN2-203ENST00000439861 MYT1Q01538 1121 aa14.44□□□□□ -0.1
SYN2-203ENST00000439861 DNMBPQ6XZF7 1577 aa14.43□□□□□ -0.1
SYN2-203ENST00000439861 TOPBP1Q92547 1522 aa14.43□□□□□ -0.1
SYN2-203ENST00000439861 IGF1RP08069 1367 aa14.42□□□□□ -0.1
SYN2-203ENST00000439861 RAD54L2Q9Y4B4 1467 aa14.41□□□□□ -0.1
SYN2-203ENST00000439861 SLC24A1O60721 1099 aa14.41□□□□□ -0.1
SYN2-203ENST00000439861 DIEXFQ68CQ4 756 aaKnown RBP14.41□□□□□ -0.1
SYN2-203ENST00000439861 PELP1Q8IZL8 1130 aaKnown RBP14.4□□□□□ -0.1
SYN2-203ENST00000439861 POLA1P09884 1462 aaPredicted RBP14.39□□□□□ -0.11
SYN2-203ENST00000439861 URB2Q14146 1524 aaKnown RBP14.39□□□□□ -0.11
SYN2-203ENST00000439861 VPS8Q8N3P4 1428 aa14.38□□□□□ -0.11
SYN2-203ENST00000439861 ACIN1Q9UKV3 1341 aaKnown RBP14.36□□□□□ -0.11
SYN2-203ENST00000439861 KIF21AQ7Z4S6 1674 aa14.36□□□□□ -0.11
SYN2-203ENST00000439861 ARAP1Q96P48 1450 aa14.34□□□□□ -0.11
SYN2-203ENST00000439861 ABCA10Q8WWZ4 1543 aa14.34□□□□□ -0.11
SYN2-203ENST00000439861 CARMIL1Q5VZK9 1371 aa14.33□□□□□ -0.12
SYN2-203ENST00000439861 PDS5BQ9NTI5 1447 aa14.32□□□□□ -0.12
SYN2-203ENST00000439861 ZNF316A6NFI3 1004 aaPredicted RBP14.3□□□□□ -0.12
SYN2-203ENST00000439861 NEUROD1Q13562 356 aa14.29□□□□□ -0.12
SYN2-203ENST00000439861 CENPBP07199 599 aaPredicted RBP14.29□□□□□ -0.12
SYN2-203ENST00000439861 WDR97A6NE52 1622 aa14.28□□□□□ -0.12
SYN2-203ENST00000439861 ARHGAP35Q9NRY4 1499 aa14.28□□□□□ -0.12
SYN2-203ENST00000439861 APLP2Q06481 763 aa14.27□□□□□ -0.13
SYN2-203ENST00000439861 HNRNPUL2Q1KMD3 747 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms