RNA–Protein interactions for RNA: ENST00000439004.1

C1orf140-202, Transcript of Putative uncharacterized protein C1orf140, humanhuman

TSL 1 (best) BASIC

Gene C1orf140, Length 4,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf140-202ENST00000439004 NISCHQ9Y2I1 1504 aa11.33□□□□□ -0.6
C1orf140-202ENST00000439004 DCAF8L2P0C7V8 631 aa10.82□□□□□ -0.68
C1orf140-202ENST00000439004 ABCC9O60706 1549 aa10.45□□□□□ -0.74
C1orf140-202ENST00000439004 CCDC180Q9P1Z9 1646 aa9.99□□□□□ -0.81
C1orf140-202ENST00000439004 RB1CC1Q8TDY2 1594 aa9.98□□□□□ -0.81
C1orf140-202ENST00000439004 FAM9AQ8IZU1 332 aaPredicted RBP9.9□□□□□ -0.82
C1orf140-202ENST00000439004 PABPN1Q86U42 306 aaKnown RBP eCLIP9.9□□□□□ -0.83
C1orf140-202ENST00000439004 NACADO15069 1562 aa9.8□□□□□ -0.84
C1orf140-202ENST00000439004 ERCC6Q03468 1493 aa9.57□□□□□ -0.88
C1orf140-202ENST00000439004 SHROOM4Q9ULL8 1493 aa9.54□□□□□ -0.88
C1orf140-202ENST00000439004 CECR2Q9BXF3 1484 aa9.5□□□□□ -0.89
C1orf140-202ENST00000439004 AEBP2Q6ZN18 517 aaPredicted RBP9.45□□□□□ -0.9
C1orf140-202ENST00000439004 MYO15BQ96JP2 1530 aa9.44□□□□□ -0.9
C1orf140-202ENST00000439004 SCRIBQ14160 1630 aa9.43□□□□□ -0.9
C1orf140-202ENST00000439004 NPM1P06748 294 aaKnown RBP eCLIP9.36□□□□□ -0.91
C1orf140-202ENST00000439004 TRIM41Q8WV44 630 aa9.35□□□□□ -0.91
C1orf140-202ENST00000439004 TRHP20396 242 aaPredicted RBP9.31□□□□□ -0.92
C1orf140-202ENST00000439004 PDS5BQ9NTI5 1447 aa9.3□□□□□ -0.92
C1orf140-202ENST00000439004 FBLN2P98095 1184 aa9.27□□□□□ -0.92
C1orf140-202ENST00000439004 DNAJC5BQ9UF47 199 aa9.27□□□□□ -0.93
C1orf140-202ENST00000439004 DCAF1Q9Y4B6 1507 aa9.27□□□□□ -0.93
C1orf140-202ENST00000439004 DNAJC5Q9H3Z4 198 aa9.23□□□□□ -0.93
C1orf140-202ENST00000439004 OSCARQ8IYS5 282 aa9.22□□□□□ -0.93
C1orf140-202ENST00000439004 ZCCHC6Q5VYS8 1495 aaKnown RBP9.2□□□□□ -0.94
C1orf140-202ENST00000439004 BAZ1BQ9UIG0 1483 aaKnown RBP9.16□□□□□ -0.94
C1orf140-202ENST00000439004 SMARCA2P51531 1590 aa9.15□□□□□ -0.94
C1orf140-202ENST00000439004 CUX2O14529 1486 aa9.13□□□□□ -0.95
C1orf140-202ENST00000439004 CHMP7Q8WUX9 453 aaPredicted RBP9.12□□□□□ -0.95
C1orf140-202ENST00000439004 EIF4G1Q04637 1599 aaKnown RBP9.08□□□□□ -0.96
C1orf140-202ENST00000439004 SLC24A1O60721 1099 aa9.07□□□□□ -0.96
C1orf140-202ENST00000439004 CC2D2AQ9P2K1 1620 aa9.06□□□□□ -0.96
C1orf140-202ENST00000439004 MYT1LQ9UL68 1186 aa9.02□□□□□ -0.97
C1orf140-202ENST00000439004 SUPT5HO00267 1087 aaKnown RBP9.01□□□□□ -0.97
C1orf140-202ENST00000439004 BAZ1AQ9NRL2 1556 aaPredicted RBP9□□□□□ -0.97
C1orf140-202ENST00000439004 ESF1Q9H501 851 aaKnown RBP8.98□□□□□ -0.97
C1orf140-202ENST00000439004 NCAPD3P42695 1498 aa8.97□□□□□ -0.97
C1orf140-202ENST00000439004 CADPSQ9ULU8 1353 aa8.96□□□□□ -0.98
C1orf140-202ENST00000439004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.95□□□□□ -0.98
C1orf140-202ENST00000439004 HNRNPUL2Q1KMD3 747 aaKnown RBP8.95□□□□□ -0.98
C1orf140-202ENST00000439004 ABCC8Q09428 1581 aa8.95□□□□□ -0.98
C1orf140-202ENST00000439004 CEP164Q9UPV0 1460 aa8.94□□□□□ -0.98
C1orf140-202ENST00000439004 CYB5RLQ6IPT4 315 aa8.92□□□□□ -0.98
C1orf140-202ENST00000439004 ATAD2BQ9ULI0 1458 aa8.88□□□□□ -0.99
C1orf140-202ENST00000439004 TTBK1Q5TCY1 1321 aaPredicted RBP8.87□□□□□ -0.99
C1orf140-202ENST00000439004 MRC2Q9UBG0 1479 aa8.87□□□□□ -0.99
C1orf140-202ENST00000439004 APLP2Q06481 763 aa8.84□□□□□ -0.99
C1orf140-202ENST00000439004 EHMT2Q96KQ7 1210 aa8.82□□□□□ -1
C1orf140-202ENST00000439004 HMGXB3Q12766 1538 aa8.82□□□□□ -1
C1orf140-202ENST00000439004 LAMC3Q9Y6N6 1575 aa8.81□□□□□ -1
C1orf140-202ENST00000439004 CHIC1Q5VXU3 224 aa8.8□□□□□ -1
C1orf140-202ENST00000439004 BICRAQ9NZM4 1560 aa8.8□□□□□ -1
C1orf140-202ENST00000439004 ATP1B4Q9UN42 357 aaPredicted RBP8.79□□□□□ -1
C1orf140-202ENST00000439004 CDK11AQ9UQ88 783 aaPredicted RBP8.79□□□□□ -1
C1orf140-202ENST00000439004 FANCD2Q9BXW9 1451 aa8.76□□□□□ -1.01
C1orf140-202ENST00000439004 IFT140Q96RY7 1462 aa8.75□□□□□ -1.01
C1orf140-202ENST00000439004 ARID4BQ4LE39 1312 aaPredicted RBP8.74□□□□□ -1.01
C1orf140-202ENST00000439004 CARMIL2Q6F5E8 1435 aa8.72□□□□□ -1.01
C1orf140-202ENST00000439004 FOXD1Q16676 465 aa8.72□□□□□ -1.01
C1orf140-202ENST00000439004 SMARCA4P51532 1647 aa8.68□□□□□ -1.02
C1orf140-202ENST00000439004 SOGA1O94964 1423 aa8.68□□□□□ -1.02
C1orf140-202ENST00000439004 WRNQ14191 1432 aaPredicted RBP eCLIP8.64□□□□□ -1.03
C1orf140-202ENST00000439004 FAM69CQ0P6D2 419 aa8.64□□□□□ -1.03
C1orf140-202ENST00000439004 UBTFP17480 764 aaKnown RBP8.63□□□□□ -1.03
C1orf140-202ENST00000439004 RSF1Q96T23 1441 aaPredicted RBP8.61□□□□□ -1.03
C1orf140-202ENST00000439004 DMRT2Q9Y5R5 561 aa8.58□□□□□ -1.04
C1orf140-202ENST00000439004 PLEKHD1A6NEE1 506 aa8.57□□□□□ -1.04
C1orf140-202ENST00000439004 NESP48681 1621 aa8.57□□□□□ -1.04
C1orf140-202ENST00000439004 MROH2BQ7Z745 1585 aa8.57□□□□□ -1.04
C1orf140-202ENST00000439004 GRIN2BQ13224 1484 aa8.56□□□□□ -1.04
C1orf140-202ENST00000439004 PLPPR3Q6T4P5 718 aa8.56□□□□□ -1.04
C1orf140-202ENST00000439004 TDRD9Q8NDG6 1382 aaKnown RBP8.56□□□□□ -1.04
C1orf140-202ENST00000439004 JPH4Q96JJ6 628 aa8.55□□□□□ -1.04
C1orf140-202ENST00000439004 UNC13AQ9UPW8 1703 aa8.55□□□□□ -1.04
C1orf140-202ENST00000439004 RANGAP1P46060 587 aaPredicted RBP8.55□□□□□ -1.04
C1orf140-202ENST00000439004 SYNJ1O43426 1573 aa8.54□□□□□ -1.04
C1orf140-202ENST00000439004 KIF27Q86VH2 1401 aa8.54□□□□□ -1.04
C1orf140-202ENST00000439004 CFTRP13569 1480 aa8.53□□□□□ -1.04
C1orf140-202ENST00000439004 KCNH8Q96L42 1107 aa8.53□□□□□ -1.04
C1orf140-202ENST00000439004 TOP2AP11388 1531 aaKnown RBP8.52□□□□□ -1.05
C1orf140-202ENST00000439004 POGZQ7Z3K3 1410 aa8.51□□□□□ -1.05
C1orf140-202ENST00000439004 BCANQ96GW7 911 aa8.5□□□□□ -1.05
C1orf140-202ENST00000439004 STAG3Q9UJ98 1225 aa8.5□□□□□ -1.05
C1orf140-202ENST00000439004 PTPRGP23470 1445 aa8.49□□□□□ -1.05
C1orf140-202ENST00000439004 MAGI1Q96QZ7 1491 aaPredicted RBP8.49□□□□□ -1.05
C1orf140-202ENST00000439004 PHF23Q9BUL5 403 aaPredicted RBP8.48□□□□□ -1.05
C1orf140-202ENST00000439004 SCAF1Q9H7N4 1312 aaKnown RBP8.47□□□□□ -1.05
C1orf140-202ENST00000439004 GAPVD1Q14C86 1478 aa8.47□□□□□ -1.05
C1orf140-202ENST00000439004 DCAF8L1A6NGE4 600 aa8.45□□□□□ -1.06
C1orf140-202ENST00000439004 HDGFP51858 240 aaKnown RBP8.44□□□□□ -1.06
C1orf140-202ENST00000439004 FHAD1B1AJZ9 1412 aa8.44□□□□□ -1.06
C1orf140-202ENST00000439004 TEX14Q8IWB6 1497 aa8.43□□□□□ -1.06
C1orf140-202ENST00000439004 WDR62O43379 1518 aa8.43□□□□□ -1.06
C1orf140-202ENST00000439004 GOLGA3Q08378 1498 aa8.43□□□□□ -1.06
C1orf140-202ENST00000439004 SYNJ2O15056 1496 aa8.42□□□□□ -1.06
C1orf140-202ENST00000439004 AQRO60306 1485 aaKnown RBP eCLIP8.41□□□□□ -1.06
C1orf140-202ENST00000439004 TOPBP1Q92547 1522 aa8.41□□□□□ -1.06
C1orf140-202ENST00000439004 DNMBPQ6XZF7 1577 aa8.41□□□□□ -1.06
C1orf140-202ENST00000439004 PEG3Q9GZU2 1588 aa8.4□□□□□ -1.06
C1orf140-202ENST00000439004 EFCAB2Q5VUJ9 269 aa8.4□□□□□ -1.07
C1orf140-202ENST00000439004 CCDC88BA6NC98 1476 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms