RNA–Protein interactions for RNA: ENST00000438337.2

RAB11FIP1P1-201, Transcript of RAB11 family interacting protein 1 pseudogene 1, humanhuman

BASIC

Gene RAB11FIP1P1, Length 1,762 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1P1-201ENST00000438337 AEBP2Q6ZN18 517 aaPredicted RBP26.02■■□□□ 1.76
RAB11FIP1P1-201ENST00000438337 CHIC1Q5VXU3 224 aa25.5■■□□□ 1.67
RAB11FIP1P1-201ENST00000438337 NISCHQ9Y2I1 1504 aa23.22■■□□□ 1.31
RAB11FIP1P1-201ENST00000438337 PHF23Q9BUL5 403 aaPredicted RBP22.4■■□□□ 1.18
RAB11FIP1P1-201ENST00000438337 SENP3Q9H4L4 574 aaPredicted RBP22.12■■□□□ 1.13
RAB11FIP1P1-201ENST00000438337 PLPPR3Q6T4P5 718 aa20.75■□□□□ 0.91
RAB11FIP1P1-201ENST00000438337 CCDC180Q9P1Z9 1646 aa20.55■□□□□ 0.88
RAB11FIP1P1-201ENST00000438337 FOXD1Q16676 465 aa20.49■□□□□ 0.87
RAB11FIP1P1-201ENST00000438337 ABCC9O60706 1549 aa20.03■□□□□ 0.8
RAB11FIP1P1-201ENST00000438337 PPP6R1Q9UPN7 881 aa19.74■□□□□ 0.75
RAB11FIP1P1-201ENST00000438337 ADRA2BP18089 450 aa19.72■□□□□ 0.75
RAB11FIP1P1-201ENST00000438337 ZCCHC6Q5VYS8 1495 aaKnown RBP19.4■□□□□ 0.7
RAB11FIP1P1-201ENST00000438337 DCAF8L2P0C7V8 631 aa19.39■□□□□ 0.7
RAB11FIP1P1-201ENST00000438337 PIAS4Q8N2W9 510 aaPredicted RBP19.34■□□□□ 0.69
RAB11FIP1P1-201ENST00000438337 RB1CC1Q8TDY2 1594 aa19.24■□□□□ 0.67
RAB11FIP1P1-201ENST00000438337 NACADO15069 1562 aa19.22■□□□□ 0.67
RAB11FIP1P1-201ENST00000438337 DCAF1Q9Y4B6 1507 aa19.11■□□□□ 0.65
RAB11FIP1P1-201ENST00000438337 MYO15BQ96JP2 1530 aa19.07■□□□□ 0.64
RAB11FIP1P1-201ENST00000438337 UNC13AQ9UPW8 1703 aa19.03■□□□□ 0.64
RAB11FIP1P1-201ENST00000438337 SCRIBQ14160 1630 aa18.91■□□□□ 0.62
RAB11FIP1P1-201ENST00000438337 MSH5O43196 834 aa18.91■□□□□ 0.62
RAB11FIP1P1-201ENST00000438337 BICRAQ9NZM4 1560 aa18.76■□□□□ 0.59
RAB11FIP1P1-201ENST00000438337 PABPN1Q86U42 306 aaKnown RBP eCLIP18.75■□□□□ 0.59
RAB11FIP1P1-201ENST00000438337 SHROOM4Q9ULL8 1493 aa18.64■□□□□ 0.57
RAB11FIP1P1-201ENST00000438337 PPP4R3CPQ6ZMV5 832 aa18.27■□□□□ 0.51
RAB11FIP1P1-201ENST00000438337 DNAJC5BQ9UF47 199 aa18.23■□□□□ 0.51
RAB11FIP1P1-201ENST00000438337 EIF4G1Q04637 1599 aaKnown RBP18.21■□□□□ 0.51
RAB11FIP1P1-201ENST00000438337 CECR2Q9BXF3 1484 aa18.17■□□□□ 0.5
RAB11FIP1P1-201ENST00000438337 CC2D2AQ9P2K1 1620 aa18.12■□□□□ 0.49
RAB11FIP1P1-201ENST00000438337 SCAF1Q9H7N4 1312 aaKnown RBP18.11■□□□□ 0.49
RAB11FIP1P1-201ENST00000438337 SMARCA4P51532 1647 aa18.04■□□□□ 0.48
RAB11FIP1P1-201ENST00000438337 MROH2BQ7Z745 1585 aa17.98■□□□□ 0.47
RAB11FIP1P1-201ENST00000438337 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.47
RAB11FIP1P1-201ENST00000438337 KCNA4P22459 653 aa17.89■□□□□ 0.45
RAB11FIP1P1-201ENST00000438337 MAPK8IP2Q13387 824 aaPredicted RBP17.86■□□□□ 0.45
RAB11FIP1P1-201ENST00000438337 WIZO95785 1651 aa17.86■□□□□ 0.45
RAB11FIP1P1-201ENST00000438337 NCBP3Q53F19 620 aaKnown RBP17.84■□□□□ 0.45
RAB11FIP1P1-201ENST00000438337 ATAD2BQ9ULI0 1458 aa17.83■□□□□ 0.44
RAB11FIP1P1-201ENST00000438337 RSF1Q96T23 1441 aaPredicted RBP17.78■□□□□ 0.44
RAB11FIP1P1-201ENST00000438337 SMARCA2P51531 1590 aa17.77■□□□□ 0.44
RAB11FIP1P1-201ENST00000438337 PEG3Q9GZU2 1588 aa17.76■□□□□ 0.43
RAB11FIP1P1-201ENST00000438337 CNKSR2Q8WXI2 1034 aa17.76■□□□□ 0.43
RAB11FIP1P1-201ENST00000438337 NCAPD3P42695 1498 aa17.72■□□□□ 0.43
RAB11FIP1P1-201ENST00000438337 BAZ1BQ9UIG0 1483 aaKnown RBP17.7■□□□□ 0.42
RAB11FIP1P1-201ENST00000438337 HMGXB3Q12766 1538 aa17.69■□□□□ 0.42
RAB11FIP1P1-201ENST00000438337 DMRT2Q9Y5R5 561 aa17.66■□□□□ 0.42
RAB11FIP1P1-201ENST00000438337 SUPT5HO00267 1087 aaKnown RBP17.65■□□□□ 0.42
RAB11FIP1P1-201ENST00000438337 TOP2AP11388 1531 aaKnown RBP17.55■□□□□ 0.4
RAB11FIP1P1-201ENST00000438337 NPM3O75607 178 aaKnown RBP17.55■□□□□ 0.4
RAB11FIP1P1-201ENST00000438337 NESP48681 1621 aa17.43■□□□□ 0.38
RAB11FIP1P1-201ENST00000438337 RNF216Q9NWF9 866 aaPredicted RBP17.41■□□□□ 0.38
RAB11FIP1P1-201ENST00000438337 CCDC88BA6NC98 1476 aa17.37■□□□□ 0.37
RAB11FIP1P1-201ENST00000438337 HOXD11P31277 338 aaPredicted RBP17.32■□□□□ 0.36
RAB11FIP1P1-201ENST00000438337 KIF21AQ7Z4S6 1674 aa17.27■□□□□ 0.36
RAB11FIP1P1-201ENST00000438337 LAMC3Q9Y6N6 1575 aa17.26■□□□□ 0.35
RAB11FIP1P1-201ENST00000438337 CADPSQ9ULU8 1353 aa17.23■□□□□ 0.35
RAB11FIP1P1-201ENST00000438337 PRDM2Q13029 1718 aa17.21■□□□□ 0.35
RAB11FIP1P1-201ENST00000438337 CFTRP13569 1480 aa17.19■□□□□ 0.34
RAB11FIP1P1-201ENST00000438337 ERCC6Q03468 1493 aa17.17■□□□□ 0.34
RAB11FIP1P1-201ENST00000438337 FANCD2Q9BXW9 1451 aa17.09■□□□□ 0.33
RAB11FIP1P1-201ENST00000438337 THOC2Q8NI27 1593 aaKnown RBP17.09■□□□□ 0.33
RAB11FIP1P1-201ENST00000438337 POTEDQ86YR6 584 aa17.09■□□□□ 0.33
RAB11FIP1P1-201ENST00000438337 PDS5BQ9NTI5 1447 aa17.08■□□□□ 0.33
RAB11FIP1P1-201ENST00000438337 SLC4A1APQ9BWU0 796 aaKnown RBP17.06■□□□□ 0.32
RAB11FIP1P1-201ENST00000438337 CEP164Q9UPV0 1460 aa17.04■□□□□ 0.32
RAB11FIP1P1-201ENST00000438337 MRC2Q9UBG0 1479 aa16.97■□□□□ 0.31
RAB11FIP1P1-201ENST00000438337 URB2Q14146 1524 aaKnown RBP16.97■□□□□ 0.31
RAB11FIP1P1-201ENST00000438337 WDR62O43379 1518 aa16.92■□□□□ 0.3
RAB11FIP1P1-201ENST00000438337 ABCC8Q09428 1581 aa16.92■□□□□ 0.3
RAB11FIP1P1-201ENST00000438337 TOPBP1Q92547 1522 aa16.86■□□□□ 0.29
RAB11FIP1P1-201ENST00000438337 DCAF8L1A6NGE4 600 aa16.85■□□□□ 0.29
RAB11FIP1P1-201ENST00000438337 CUX1P39880 1505 aa16.85■□□□□ 0.29
RAB11FIP1P1-201ENST00000438337 DNMBPQ6XZF7 1577 aa16.85■□□□□ 0.29
RAB11FIP1P1-201ENST00000438337 CUX2O14529 1486 aa16.83■□□□□ 0.29
RAB11FIP1P1-201ENST00000438337 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
RAB11FIP1P1-201ENST00000438337 POLA1P09884 1462 aaPredicted RBP16.74■□□□□ 0.27
RAB11FIP1P1-201ENST00000438337 FGD5Q6ZNL6 1462 aa16.74■□□□□ 0.27
RAB11FIP1P1-201ENST00000438337 WRNQ14191 1432 aaPredicted RBP eCLIP16.74■□□□□ 0.27
RAB11FIP1P1-201ENST00000438337 BIVM-ERCC5R4GMW8 1640 aa16.73■□□□□ 0.27
RAB11FIP1P1-201ENST00000438337 RAD54L2Q9Y4B4 1467 aa16.71■□□□□ 0.27
RAB11FIP1P1-201ENST00000438337 TOP2BQ02880 1626 aa16.71■□□□□ 0.27
RAB11FIP1P1-201ENST00000438337 TARBP1Q13395 1621 aaKnown RBP16.7■□□□□ 0.26
RAB11FIP1P1-201ENST00000438337 ZNF608Q9ULD9 1512 aaPredicted RBP16.68■□□□□ 0.26
RAB11FIP1P1-201ENST00000438337 WDR97A6NE52 1622 aa16.65■□□□□ 0.26
RAB11FIP1P1-201ENST00000438337 EIF4G3O43432 1585 aaKnown RBP16.63■□□□□ 0.25
RAB11FIP1P1-201ENST00000438337 TRIM41Q8WV44 630 aa16.63■□□□□ 0.25
RAB11FIP1P1-201ENST00000438337 IFT140Q96RY7 1462 aa16.63■□□□□ 0.25
RAB11FIP1P1-201ENST00000438337 SOGA1O94964 1423 aa16.62■□□□□ 0.25
RAB11FIP1P1-201ENST00000438337 EHMT2Q96KQ7 1210 aa16.6■□□□□ 0.25
RAB11FIP1P1-201ENST00000438337 AQRO60306 1485 aaKnown RBP eCLIP16.58■□□□□ 0.24
RAB11FIP1P1-201ENST00000438337 TDRD9Q8NDG6 1382 aaKnown RBP16.57■□□□□ 0.24
RAB11FIP1P1-201ENST00000438337 SLC4A2P04920 1241 aa16.54■□□□□ 0.24
RAB11FIP1P1-201ENST00000438337 PBRM1Q86U86 1689 aa16.53■□□□□ 0.24
RAB11FIP1P1-201ENST00000438337 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.23
RAB11FIP1P1-201ENST00000438337 ABCA5Q8WWZ7 1642 aa16.51■□□□□ 0.23
RAB11FIP1P1-201ENST00000438337 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.49■□□□□ 0.23
RAB11FIP1P1-201ENST00000438337 FOXD4L1Q9NU39 408 aa16.48■□□□□ 0.23
RAB11FIP1P1-201ENST00000438337 ZBTB22O15209 634 aa16.45■□□□□ 0.22
RAB11FIP1P1-201ENST00000438337 GAPVD1Q14C86 1478 aa16.45■□□□□ 0.22
RAB11FIP1P1-201ENST00000438337 CHD1O14646 1710 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms