RNA–Protein interactions for RNA: ENST00000436626.1

GAPDHP48-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 48, humanhuman

BASIC

Gene GAPDHP48, Length 961 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP48-201ENST00000436626 AEBP2Q6ZN18 517 aaPredicted RBP17.43■□□□□ 0.38
GAPDHP48-201ENST00000436626 CHIC1Q5VXU3 224 aa16.31■□□□□ 0.2
GAPDHP48-201ENST00000436626 SENP3Q9H4L4 574 aaPredicted RBP14.95□□□□□ -0.02
GAPDHP48-201ENST00000436626 NISCHQ9Y2I1 1504 aa14.75□□□□□ -0.05
GAPDHP48-201ENST00000436626 PHF23Q9BUL5 403 aaPredicted RBP14.7□□□□□ -0.06
GAPDHP48-201ENST00000436626 ABCC9O60706 1549 aa14.13□□□□□ -0.15
GAPDHP48-201ENST00000436626 FOXD1Q16676 465 aa13.97□□□□□ -0.17
GAPDHP48-201ENST00000436626 DNAJC5BQ9UF47 199 aa13.76□□□□□ -0.21
GAPDHP48-201ENST00000436626 CCDC180Q9P1Z9 1646 aa13.57□□□□□ -0.24
GAPDHP48-201ENST00000436626 POTEDQ86YR6 584 aa13.56□□□□□ -0.24
GAPDHP48-201ENST00000436626 MSH5O43196 834 aa13.23□□□□□ -0.29
GAPDHP48-201ENST00000436626 RB1CC1Q8TDY2 1594 aa13.2□□□□□ -0.3
GAPDHP48-201ENST00000436626 DNAJC5Q9H3Z4 198 aa13.09□□□□□ -0.31
GAPDHP48-201ENST00000436626 PABPN1Q86U42 306 aaKnown RBP eCLIP13.02□□□□□ -0.33
GAPDHP48-201ENST00000436626 PIAS4Q8N2W9 510 aaPredicted RBP13□□□□□ -0.33
GAPDHP48-201ENST00000436626 UNC13AQ9UPW8 1703 aa12.96□□□□□ -0.33
GAPDHP48-201ENST00000436626 NACADO15069 1562 aa12.94□□□□□ -0.34
GAPDHP48-201ENST00000436626 BICRAQ9NZM4 1560 aa12.83□□□□□ -0.36
GAPDHP48-201ENST00000436626 CECR2Q9BXF3 1484 aa12.79□□□□□ -0.36
GAPDHP48-201ENST00000436626 PLPPR3Q6T4P5 718 aa12.78□□□□□ -0.36
GAPDHP48-201ENST00000436626 PPP6R1Q9UPN7 881 aa12.77□□□□□ -0.37
GAPDHP48-201ENST00000436626 CC2D2AQ9P2K1 1620 aa12.76□□□□□ -0.37
GAPDHP48-201ENST00000436626 ADRA2BP18089 450 aa12.74□□□□□ -0.37
GAPDHP48-201ENST00000436626 DCAF8L2P0C7V8 631 aa12.67□□□□□ -0.38
GAPDHP48-201ENST00000436626 SHROOM4Q9ULL8 1493 aa12.59□□□□□ -0.39
GAPDHP48-201ENST00000436626 EIF4G1Q04637 1599 aaKnown RBP12.57□□□□□ -0.4
GAPDHP48-201ENST00000436626 MYO15BQ96JP2 1530 aa12.53□□□□□ -0.4
GAPDHP48-201ENST00000436626 CUX2O14529 1486 aa12.45□□□□□ -0.42
GAPDHP48-201ENST00000436626 SCRIBQ14160 1630 aa12.31□□□□□ -0.44
GAPDHP48-201ENST00000436626 TRIM41Q8WV44 630 aa12.29□□□□□ -0.44
GAPDHP48-201ENST00000436626 ERCC6Q03468 1493 aa12.26□□□□□ -0.45
GAPDHP48-201ENST00000436626 DCAF1Q9Y4B6 1507 aa12.15□□□□□ -0.46
GAPDHP48-201ENST00000436626 ZCCHC6Q5VYS8 1495 aaKnown RBP12.11□□□□□ -0.47
GAPDHP48-201ENST00000436626 THOC2Q8NI27 1593 aaKnown RBP12.01□□□□□ -0.49
GAPDHP48-201ENST00000436626 NESP48681 1621 aa11.96□□□□□ -0.5
GAPDHP48-201ENST00000436626 NCAPD3P42695 1498 aa11.91□□□□□ -0.5
GAPDHP48-201ENST00000436626 SMARCA2P51531 1590 aa11.88□□□□□ -0.51
GAPDHP48-201ENST00000436626 KIF21AQ7Z4S6 1674 aa11.85□□□□□ -0.51
GAPDHP48-201ENST00000436626 BAZ1AQ9NRL2 1556 aaPredicted RBP11.82□□□□□ -0.52
GAPDHP48-201ENST00000436626 HMGXB3Q12766 1538 aa11.81□□□□□ -0.52
GAPDHP48-201ENST00000436626 MAPK8IP2Q13387 824 aaPredicted RBP11.81□□□□□ -0.52
GAPDHP48-201ENST00000436626 ATAD2BQ9ULI0 1458 aa11.8□□□□□ -0.52
GAPDHP48-201ENST00000436626 LAMC3Q9Y6N6 1575 aa11.79□□□□□ -0.52
GAPDHP48-201ENST00000436626 DMRT2Q9Y5R5 561 aa11.78□□□□□ -0.52
GAPDHP48-201ENST00000436626 RIMBP3CA6NJZ7 1639 aa11.72□□□□□ -0.53
GAPDHP48-201ENST00000436626 RIMBP3BA6NNM3 1639 aa11.72□□□□□ -0.53
GAPDHP48-201ENST00000436626 RIMBP3Q9UFD9 1639 aa11.72□□□□□ -0.53
GAPDHP48-201ENST00000436626 OSCARQ8IYS5 282 aa11.72□□□□□ -0.53
GAPDHP48-201ENST00000436626 PDS5BQ9NTI5 1447 aa11.71□□□□□ -0.53
GAPDHP48-201ENST00000436626 SMARCA4P51532 1647 aa11.68□□□□□ -0.54
GAPDHP48-201ENST00000436626 WDR62O43379 1518 aa11.68□□□□□ -0.54
GAPDHP48-201ENST00000436626 MRC2Q9UBG0 1479 aa11.68□□□□□ -0.54
GAPDHP48-201ENST00000436626 BAZ1BQ9UIG0 1483 aaKnown RBP11.68□□□□□ -0.54
GAPDHP48-201ENST00000436626 SCAF1Q9H7N4 1312 aaKnown RBP11.65□□□□□ -0.54
GAPDHP48-201ENST00000436626 CACNB1Q02641 598 aaPredicted RBP11.62□□□□□ -0.55
GAPDHP48-201ENST00000436626 ARHGEF11O15085 1522 aa11.6□□□□□ -0.55
GAPDHP48-201ENST00000436626 TRHP20396 242 aaPredicted RBP11.58□□□□□ -0.56
GAPDHP48-201ENST00000436626 PEG3Q9GZU2 1588 aa11.55□□□□□ -0.56
GAPDHP48-201ENST00000436626 CADPSQ9ULU8 1353 aa11.52□□□□□ -0.57
GAPDHP48-201ENST00000436626 CEP164Q9UPV0 1460 aa11.51□□□□□ -0.57
GAPDHP48-201ENST00000436626 CYB5RLQ6IPT4 315 aa11.49□□□□□ -0.57
GAPDHP48-201ENST00000436626 ARAP1Q96P48 1450 aa11.44□□□□□ -0.58
GAPDHP48-201ENST00000436626 FANCD2Q9BXW9 1451 aa11.42□□□□□ -0.58
GAPDHP48-201ENST00000436626 DCAF8L1A6NGE4 600 aa11.4□□□□□ -0.58
GAPDHP48-201ENST00000436626 URB2Q14146 1524 aaKnown RBP11.38□□□□□ -0.59
GAPDHP48-201ENST00000436626 MROH2BQ7Z745 1585 aa11.37□□□□□ -0.59
GAPDHP48-201ENST00000436626 CHD1O14646 1710 aa11.35□□□□□ -0.59
GAPDHP48-201ENST00000436626 ZNF608Q9ULD9 1512 aaPredicted RBP11.33□□□□□ -0.6
GAPDHP48-201ENST00000436626 ILDR1Q86SU0 546 aaPredicted RBP11.31□□□□□ -0.6
GAPDHP48-201ENST00000436626 RSF1Q96T23 1441 aaPredicted RBP11.3□□□□□ -0.6
GAPDHP48-201ENST00000436626 EIF4G3O43432 1585 aaKnown RBP11.28□□□□□ -0.6
GAPDHP48-201ENST00000436626 IFT140Q96RY7 1462 aa11.28□□□□□ -0.6
GAPDHP48-201ENST00000436626 CFTRP13569 1480 aa11.27□□□□□ -0.6
GAPDHP48-201ENST00000436626 RNF39Q9H2S5 420 aa11.24□□□□□ -0.61
GAPDHP48-201ENST00000436626 WIZO95785 1651 aa11.23□□□□□ -0.61
GAPDHP48-201ENST00000436626 PRDM2Q13029 1718 aa11.22□□□□□ -0.61
GAPDHP48-201ENST00000436626 HOXD11P31277 338 aaPredicted RBP11.18□□□□□ -0.62
GAPDHP48-201ENST00000436626 FBLN2P98095 1184 aa11.17□□□□□ -0.62
GAPDHP48-201ENST00000436626 PPP4R3CPQ6ZMV5 832 aa11.16□□□□□ -0.62
GAPDHP48-201ENST00000436626 CLASP1Q7Z460 1538 aa11.15□□□□□ -0.62
GAPDHP48-201ENST00000436626 TOPBP1Q92547 1522 aa11.14□□□□□ -0.63
GAPDHP48-201ENST00000436626 AQRO60306 1485 aaKnown RBP eCLIP11.12□□□□□ -0.63
GAPDHP48-201ENST00000436626 TARBP1Q13395 1621 aaKnown RBP11.1□□□□□ -0.63
GAPDHP48-201ENST00000436626 SYNJ1O43426 1573 aa11.1□□□□□ -0.63
GAPDHP48-201ENST00000436626 DNMBPQ6XZF7 1577 aa11.07□□□□□ -0.64
GAPDHP48-201ENST00000436626 GAPVD1Q14C86 1478 aa11.06□□□□□ -0.64
GAPDHP48-201ENST00000436626 C1QBPQ07021 282 aaKnown RBP11.06□□□□□ -0.64
GAPDHP48-201ENST00000436626 ABCC8Q09428 1581 aa11.06□□□□□ -0.64
GAPDHP48-201ENST00000436626 KIF13AQ9H1H9 1805 aa11.05□□□□□ -0.64
GAPDHP48-201ENST00000436626 TOP2AP11388 1531 aaKnown RBP11.04□□□□□ -0.64
GAPDHP48-201ENST00000436626 CNKSR2Q8WXI2 1034 aa11.03□□□□□ -0.64
GAPDHP48-201ENST00000436626 SNAPC4Q5SXM2 1469 aa11.03□□□□□ -0.64
GAPDHP48-201ENST00000436626 RNF216Q9NWF9 866 aaPredicted RBP11.01□□□□□ -0.65
GAPDHP48-201ENST00000436626 KDM4FA0A1W2PPD8 638 aa11□□□□□ -0.65
GAPDHP48-201ENST00000436626 POLA1P09884 1462 aaPredicted RBP10.99□□□□□ -0.65
GAPDHP48-201ENST00000436626 CHMP7Q8WUX9 453 aaPredicted RBP10.98□□□□□ -0.65
GAPDHP48-201ENST00000436626 MAGI1Q96QZ7 1491 aaPredicted RBP10.97□□□□□ -0.65
GAPDHP48-201ENST00000436626 WDR97A6NE52 1622 aa10.96□□□□□ -0.65
GAPDHP48-201ENST00000436626 TDRD9Q8NDG6 1382 aaKnown RBP10.95□□□□□ -0.66
GAPDHP48-201ENST00000436626 RAD54L2Q9Y4B4 1467 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms