RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 NISCHQ9Y2I1 1504 aa23.68■■□□□ 1.38
LINC01516-201ENST00000436140 DCAF8L2P0C7V8 631 aa20.61■□□□□ 0.89
LINC01516-201ENST00000436140 SHROOM4Q9ULL8 1493 aa20.3■□□□□ 0.84
LINC01516-201ENST00000436140 CCDC180Q9P1Z9 1646 aa20.11■□□□□ 0.81
LINC01516-201ENST00000436140 ZCCHC6Q5VYS8 1495 aaKnown RBP19.82■□□□□ 0.76
LINC01516-201ENST00000436140 ABCC9O60706 1549 aa19.81■□□□□ 0.76
LINC01516-201ENST00000436140 SUPT5HO00267 1087 aaKnown RBP19.65■□□□□ 0.74
LINC01516-201ENST00000436140 SCRIBQ14160 1630 aa19.17■□□□□ 0.66
LINC01516-201ENST00000436140 DCAF1Q9Y4B6 1507 aa19.17■□□□□ 0.66
LINC01516-201ENST00000436140 PABPN1Q86U42 306 aaKnown RBP eCLIP19.03■□□□□ 0.64
LINC01516-201ENST00000436140 NACADO15069 1562 aa18.93■□□□□ 0.62
LINC01516-201ENST00000436140 RB1CC1Q8TDY2 1594 aa18.82■□□□□ 0.6
LINC01516-201ENST00000436140 MYO15BQ96JP2 1530 aa18.8■□□□□ 0.6
LINC01516-201ENST00000436140 CECR2Q9BXF3 1484 aa18.72■□□□□ 0.59
LINC01516-201ENST00000436140 RSF1Q96T23 1441 aaPredicted RBP18.61■□□□□ 0.57
LINC01516-201ENST00000436140 CHIC1Q5VXU3 224 aa18.53■□□□□ 0.56
LINC01516-201ENST00000436140 MROH2BQ7Z745 1585 aa18.48■□□□□ 0.55
LINC01516-201ENST00000436140 UNC13AQ9UPW8 1703 aa18.38■□□□□ 0.53
LINC01516-201ENST00000436140 EHMT2Q96KQ7 1210 aa18.35■□□□□ 0.53
LINC01516-201ENST00000436140 BICRAQ9NZM4 1560 aa18.32■□□□□ 0.52
LINC01516-201ENST00000436140 WIZO95785 1651 aa18.3■□□□□ 0.52
LINC01516-201ENST00000436140 FAM9AQ8IZU1 332 aaPredicted RBP18.28■□□□□ 0.52
LINC01516-201ENST00000436140 TRIM41Q8WV44 630 aa18.2■□□□□ 0.5
LINC01516-201ENST00000436140 BAZ1AQ9NRL2 1556 aaPredicted RBP18.19■□□□□ 0.5
LINC01516-201ENST00000436140 LOC105371045A0A1W2PR82 267 aa18.18■□□□□ 0.5
LINC01516-201ENST00000436140 SMARCA4P51532 1647 aa18.1■□□□□ 0.49
LINC01516-201ENST00000436140 CCDC88BA6NC98 1476 aa17.98■□□□□ 0.47
LINC01516-201ENST00000436140 ATAD2BQ9ULI0 1458 aa17.93■□□□□ 0.46
LINC01516-201ENST00000436140 TOP2AP11388 1531 aaKnown RBP17.88■□□□□ 0.45
LINC01516-201ENST00000436140 BAZ1BQ9UIG0 1483 aaKnown RBP17.88■□□□□ 0.45
LINC01516-201ENST00000436140 EIF4G1Q04637 1599 aaKnown RBP17.83■□□□□ 0.44
LINC01516-201ENST00000436140 DNAJC5BQ9UF47 199 aa17.81■□□□□ 0.44
LINC01516-201ENST00000436140 SMARCA2P51531 1590 aa17.8■□□□□ 0.44
LINC01516-201ENST00000436140 ABCC8Q09428 1581 aa17.78■□□□□ 0.44
LINC01516-201ENST00000436140 RANGAP1P46060 587 aaPredicted RBP17.63■□□□□ 0.41
LINC01516-201ENST00000436140 NCAPD3P42695 1498 aa17.62■□□□□ 0.41
LINC01516-201ENST00000436140 PEG3Q9GZU2 1588 aa17.61■□□□□ 0.41
LINC01516-201ENST00000436140 PPARGC1BQ86YN6 1023 aaKnown RBP17.6■□□□□ 0.41
LINC01516-201ENST00000436140 CC2D2AQ9P2K1 1620 aa17.59■□□□□ 0.41
LINC01516-201ENST00000436140 SOGA1O94964 1423 aa17.57■□□□□ 0.4
LINC01516-201ENST00000436140 WRNQ14191 1432 aaPredicted RBP eCLIP17.53■□□□□ 0.4
LINC01516-201ENST00000436140 UBTFP17480 764 aaKnown RBP17.53■□□□□ 0.4
LINC01516-201ENST00000436140 RUSC2Q8N2Y8 1516 aa17.52■□□□□ 0.4
LINC01516-201ENST00000436140 TTBK1Q5TCY1 1321 aaPredicted RBP17.51■□□□□ 0.39
LINC01516-201ENST00000436140 PCGF6Q9BYE7 350 aa17.5■□□□□ 0.39
LINC01516-201ENST00000436140 CSRNP3Q8WYN3 585 aa17.46■□□□□ 0.38
LINC01516-201ENST00000436140 HMGXB3Q12766 1538 aa17.41■□□□□ 0.38
LINC01516-201ENST00000436140 NESP48681 1621 aa17.4■□□□□ 0.38
LINC01516-201ENST00000436140 CADPSQ9ULU8 1353 aa17.38■□□□□ 0.37
LINC01516-201ENST00000436140 SYNJ1O43426 1573 aa17.36■□□□□ 0.37
LINC01516-201ENST00000436140 CFTRP13569 1480 aa17.32■□□□□ 0.36
LINC01516-201ENST00000436140 CUX1P39880 1505 aa17.2■□□□□ 0.34
LINC01516-201ENST00000436140 FANCD2Q9BXW9 1451 aa17.19■□□□□ 0.34
LINC01516-201ENST00000436140 RAD54L2Q9Y4B4 1467 aa17.1■□□□□ 0.33
LINC01516-201ENST00000436140 RAPGEF2Q9Y4G8 1499 aa17.09■□□□□ 0.33
LINC01516-201ENST00000436140 CUX2O14529 1486 aa17.09■□□□□ 0.33
LINC01516-201ENST00000436140 TOP2BQ02880 1626 aa17.09■□□□□ 0.33
LINC01516-201ENST00000436140 CEP162Q5TB80 1403 aa17.08■□□□□ 0.33
LINC01516-201ENST00000436140 TRIM26Q12899 539 aaPredicted RBP17.07■□□□□ 0.32
LINC01516-201ENST00000436140 P3H3Q8IVL6 736 aa17.07■□□□□ 0.32
LINC01516-201ENST00000436140 FGD5Q6ZNL6 1462 aa17.06■□□□□ 0.32
LINC01516-201ENST00000436140 TDRD9Q8NDG6 1382 aaKnown RBP17.06■□□□□ 0.32
LINC01516-201ENST00000436140 EEA1Q15075 1411 aa17.05■□□□□ 0.32
LINC01516-201ENST00000436140 KIF27Q86VH2 1401 aa17.04■□□□□ 0.32
LINC01516-201ENST00000436140 TNIKQ9UKE5 1360 aa17.03■□□□□ 0.32
LINC01516-201ENST00000436140 GOLGA3Q08378 1498 aa17.03■□□□□ 0.32
LINC01516-201ENST00000436140 CEP164Q9UPV0 1460 aa17■□□□□ 0.31
LINC01516-201ENST00000436140 PDS5BQ9NTI5 1447 aa17■□□□□ 0.31
LINC01516-201ENST00000436140 ATP1B4Q9UN42 357 aaPredicted RBP17■□□□□ 0.31
LINC01516-201ENST00000436140 IGF1RP08069 1367 aa16.97■□□□□ 0.31
LINC01516-201ENST00000436140 TOPBP1Q92547 1522 aa16.95■□□□□ 0.3
LINC01516-201ENST00000436140 URB2Q14146 1524 aaKnown RBP16.94■□□□□ 0.3
LINC01516-201ENST00000436140 CLIP1P30622 1438 aa16.94■□□□□ 0.3
LINC01516-201ENST00000436140 BIVM-ERCC5R4GMW8 1640 aa16.93■□□□□ 0.3
LINC01516-201ENST00000436140 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
LINC01516-201ENST00000436140 CARMIL1Q5VZK9 1371 aa16.93■□□□□ 0.3
LINC01516-201ENST00000436140 APLP2Q06481 763 aa16.92■□□□□ 0.3
LINC01516-201ENST00000436140 ERCC6Q03468 1493 aa16.89■□□□□ 0.29
LINC01516-201ENST00000436140 FBLN2P98095 1184 aa16.89■□□□□ 0.29
LINC01516-201ENST00000436140 LAMC3Q9Y6N6 1575 aa16.88■□□□□ 0.29
LINC01516-201ENST00000436140 PRXQ9BXM0 1461 aa16.84■□□□□ 0.29
LINC01516-201ENST00000436140 AQRO60306 1485 aaKnown RBP eCLIP16.83■□□□□ 0.29
LINC01516-201ENST00000436140 DNMBPQ6XZF7 1577 aa16.82■□□□□ 0.28
LINC01516-201ENST00000436140 KIF21AQ7Z4S6 1674 aa16.82■□□□□ 0.28
LINC01516-201ENST00000436140 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
LINC01516-201ENST00000436140 ARID3CA6NKF2 412 aa16.8■□□□□ 0.28
LINC01516-201ENST00000436140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.78■□□□□ 0.28
LINC01516-201ENST00000436140 HRCP23327 699 aa16.77■□□□□ 0.28
LINC01516-201ENST00000436140 KIF21BO75037 1637 aa16.77■□□□□ 0.28
LINC01516-201ENST00000436140 PRDM2Q13029 1718 aa16.76■□□□□ 0.27
LINC01516-201ENST00000436140 KANK4Q5T7N3 995 aaPredicted RBP16.75■□□□□ 0.27
LINC01516-201ENST00000436140 ITGAEP38570 1179 aa16.72■□□□□ 0.27
LINC01516-201ENST00000436140 GAPVD1Q14C86 1478 aa16.72■□□□□ 0.27
LINC01516-201ENST00000436140 ABCA10Q8WWZ4 1543 aa16.72■□□□□ 0.27
LINC01516-201ENST00000436140 ZNF608Q9ULD9 1512 aaPredicted RBP16.72■□□□□ 0.27
LINC01516-201ENST00000436140 MRC2Q9UBG0 1479 aa16.7■□□□□ 0.26
LINC01516-201ENST00000436140 ARAP1Q96P48 1450 aa16.68■□□□□ 0.26
LINC01516-201ENST00000436140 VPS8Q8N3P4 1428 aa16.67■□□□□ 0.26
LINC01516-201ENST00000436140 CHMP7Q8WUX9 453 aaPredicted RBP16.65■□□□□ 0.26
LINC01516-201ENST00000436140 CCER1Q8TC90 406 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 488.9 ms