RNA–Protein interactions for RNA: ENST00000436041.5

PRAMEF27-201, Transcript of PRAME family member 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF27, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF27-201ENST00000436041 NISCHQ9Y2I1 1504 aa27.49■■□□□ 1.99
PRAMEF27-201ENST00000436041 CCDC180Q9P1Z9 1646 aa23.95■■□□□ 1.42
PRAMEF27-201ENST00000436041 ZCCHC6Q5VYS8 1495 aaKnown RBP23.04■■□□□ 1.28
PRAMEF27-201ENST00000436041 DCAF8L2P0C7V8 631 aa22.82■■□□□ 1.24
PRAMEF27-201ENST00000436041 ABCC9O60706 1549 aa22.77■■□□□ 1.24
PRAMEF27-201ENST00000436041 DCAF1Q9Y4B6 1507 aa22.75■■□□□ 1.23
PRAMEF27-201ENST00000436041 MYO15BQ96JP2 1530 aa22.53■■□□□ 1.2
PRAMEF27-201ENST00000436041 NACADO15069 1562 aa22.4■■□□□ 1.18
PRAMEF27-201ENST00000436041 SHROOM4Q9ULL8 1493 aa22.34■■□□□ 1.17
PRAMEF27-201ENST00000436041 RB1CC1Q8TDY2 1594 aa22.21■■□□□ 1.15
PRAMEF27-201ENST00000436041 SCRIBQ14160 1630 aa22■■□□□ 1.11
PRAMEF27-201ENST00000436041 UNC13AQ9UPW8 1703 aa21.65■■□□□ 1.06
PRAMEF27-201ENST00000436041 SUPT5HO00267 1087 aaKnown RBP21.52■■□□□ 1.03
PRAMEF27-201ENST00000436041 PABPN1Q86U42 306 aaKnown RBP eCLIP21.52■■□□□ 1.03
PRAMEF27-201ENST00000436041 BICRAQ9NZM4 1560 aa21.5■■□□□ 1.03
PRAMEF27-201ENST00000436041 CECR2Q9BXF3 1484 aa21.35■■□□□ 1.01
PRAMEF27-201ENST00000436041 RSF1Q96T23 1441 aaPredicted RBP21.31■■□□□ 1
PRAMEF27-201ENST00000436041 BAZ1AQ9NRL2 1556 aaPredicted RBP21.23■□□□□ 0.99
PRAMEF27-201ENST00000436041 MROH2BQ7Z745 1585 aa21.21■□□□□ 0.99
PRAMEF27-201ENST00000436041 SMARCA4P51532 1647 aa21.11■□□□□ 0.97
PRAMEF27-201ENST00000436041 WIZO95785 1651 aa21■□□□□ 0.95
PRAMEF27-201ENST00000436041 EIF4G1Q04637 1599 aaKnown RBP20.88■□□□□ 0.93
PRAMEF27-201ENST00000436041 PEG3Q9GZU2 1588 aa20.88■□□□□ 0.93
PRAMEF27-201ENST00000436041 ATAD2BQ9ULI0 1458 aa20.84■□□□□ 0.93
PRAMEF27-201ENST00000436041 SMARCA2P51531 1590 aa20.81■□□□□ 0.92
PRAMEF27-201ENST00000436041 TOP2AP11388 1531 aaKnown RBP20.8■□□□□ 0.92
PRAMEF27-201ENST00000436041 NCAPD3P42695 1498 aa20.71■□□□□ 0.91
PRAMEF27-201ENST00000436041 BAZ1BQ9UIG0 1483 aaKnown RBP20.7■□□□□ 0.9
PRAMEF27-201ENST00000436041 CCDC88BA6NC98 1476 aa20.64■□□□□ 0.89
PRAMEF27-201ENST00000436041 HMGXB3Q12766 1538 aa20.6■□□□□ 0.89
PRAMEF27-201ENST00000436041 CC2D2AQ9P2K1 1620 aa20.58■□□□□ 0.89
PRAMEF27-201ENST00000436041 CHIC1Q5VXU3 224 aa20.56■□□□□ 0.88
PRAMEF27-201ENST00000436041 TRIM41Q8WV44 630 aa20.28■□□□□ 0.84
PRAMEF27-201ENST00000436041 DNAJC5BQ9UF47 199 aa20.22■□□□□ 0.83
PRAMEF27-201ENST00000436041 CFTRP13569 1480 aa20.2■□□□□ 0.82
PRAMEF27-201ENST00000436041 CADPSQ9ULU8 1353 aa20.18■□□□□ 0.82
PRAMEF27-201ENST00000436041 ABCC8Q09428 1581 aa20.1■□□□□ 0.81
PRAMEF27-201ENST00000436041 WRNQ14191 1432 aaPredicted RBP eCLIP20.06■□□□□ 0.8
PRAMEF27-201ENST00000436041 LAMC3Q9Y6N6 1575 aa19.97■□□□□ 0.79
PRAMEF27-201ENST00000436041 PRDM2Q13029 1718 aa19.96■□□□□ 0.79
PRAMEF27-201ENST00000436041 NESP48681 1621 aa19.95■□□□□ 0.78
PRAMEF27-201ENST00000436041 FANCD2Q9BXW9 1451 aa19.91■□□□□ 0.78
PRAMEF27-201ENST00000436041 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
PRAMEF27-201ENST00000436041 PELP1Q8IZL8 1130 aaKnown RBP19.88■□□□□ 0.77
PRAMEF27-201ENST00000436041 PDS5BQ9NTI5 1447 aa19.88■□□□□ 0.77
PRAMEF27-201ENST00000436041 TOP2BQ02880 1626 aa19.86■□□□□ 0.77
PRAMEF27-201ENST00000436041 FAM9AQ8IZU1 332 aaPredicted RBP19.86■□□□□ 0.77
PRAMEF27-201ENST00000436041 CUX1P39880 1505 aa19.83■□□□□ 0.77
PRAMEF27-201ENST00000436041 BIVM-ERCC5R4GMW8 1640 aa19.82■□□□□ 0.76
PRAMEF27-201ENST00000436041 HRCP23327 699 aa19.81■□□□□ 0.76
PRAMEF27-201ENST00000436041 CEP164Q9UPV0 1460 aa19.79■□□□□ 0.76
PRAMEF27-201ENST00000436041 LOC105371045A0A1W2PR82 267 aa19.77■□□□□ 0.76
PRAMEF27-201ENST00000436041 SOGA1O94964 1423 aa19.77■□□□□ 0.76
PRAMEF27-201ENST00000436041 EEA1Q15075 1411 aa19.76■□□□□ 0.75
PRAMEF27-201ENST00000436041 CSRNP3Q8WYN3 585 aa19.7■□□□□ 0.74
PRAMEF27-201ENST00000436041 DNMBPQ6XZF7 1577 aa19.69■□□□□ 0.74
PRAMEF27-201ENST00000436041 RUSC2Q8N2Y8 1516 aa19.68■□□□□ 0.74
PRAMEF27-201ENST00000436041 TOPBP1Q92547 1522 aa19.67■□□□□ 0.74
PRAMEF27-201ENST00000436041 KIF21AQ7Z4S6 1674 aa19.64■□□□□ 0.74
PRAMEF27-201ENST00000436041 FGD5Q6ZNL6 1462 aa19.64■□□□□ 0.73
PRAMEF27-201ENST00000436041 URB2Q14146 1524 aaKnown RBP19.64■□□□□ 0.73
PRAMEF27-201ENST00000436041 KIF27Q86VH2 1401 aa19.58■□□□□ 0.72
PRAMEF27-201ENST00000436041 MRC2Q9UBG0 1479 aa19.57■□□□□ 0.72
PRAMEF27-201ENST00000436041 POLA1P09884 1462 aaPredicted RBP19.56■□□□□ 0.72
PRAMEF27-201ENST00000436041 ERCC6Q03468 1493 aa19.56■□□□□ 0.72
PRAMEF27-201ENST00000436041 EHMT2Q96KQ7 1210 aa19.55■□□□□ 0.72
PRAMEF27-201ENST00000436041 CUX2O14529 1486 aa19.51■□□□□ 0.71
PRAMEF27-201ENST00000436041 MYT1Q01538 1121 aa19.51■□□□□ 0.71
PRAMEF27-201ENST00000436041 RAD54L2Q9Y4B4 1467 aa19.5■□□□□ 0.71
PRAMEF27-201ENST00000436041 ABCA10Q8WWZ4 1543 aa19.49■□□□□ 0.71
PRAMEF27-201ENST00000436041 WDR62O43379 1518 aa19.45■□□□□ 0.7
PRAMEF27-201ENST00000436041 IGF1RP08069 1367 aa19.44■□□□□ 0.7
PRAMEF27-201ENST00000436041 UBTFP17480 764 aaKnown RBP19.43■□□□□ 0.7
PRAMEF27-201ENST00000436041 GOLGA3Q08378 1498 aa19.43■□□□□ 0.7
PRAMEF27-201ENST00000436041 KIF21BO75037 1637 aa19.42■□□□□ 0.7
PRAMEF27-201ENST00000436041 PRXQ9BXM0 1461 aa19.4■□□□□ 0.7
PRAMEF27-201ENST00000436041 TNIKQ9UKE5 1360 aa19.4■□□□□ 0.7
PRAMEF27-201ENST00000436041 TDRD9Q8NDG6 1382 aaKnown RBP19.36■□□□□ 0.69
PRAMEF27-201ENST00000436041 THOC2Q8NI27 1593 aaKnown RBP19.36■□□□□ 0.69
PRAMEF27-201ENST00000436041 TARBP1Q13395 1621 aaKnown RBP19.36■□□□□ 0.69
PRAMEF27-201ENST00000436041 RAPGEF2Q9Y4G8 1499 aa19.35■□□□□ 0.69
PRAMEF27-201ENST00000436041 IFT140Q96RY7 1462 aa19.34■□□□□ 0.69
PRAMEF27-201ENST00000436041 CARMIL1Q5VZK9 1371 aa19.33■□□□□ 0.69
PRAMEF27-201ENST00000436041 WDR97A6NE52 1622 aa19.33■□□□□ 0.68
PRAMEF27-201ENST00000436041 ERICH3Q5RHP9 1530 aa19.33■□□□□ 0.68
PRAMEF27-201ENST00000436041 GAPVD1Q14C86 1478 aa19.32■□□□□ 0.68
PRAMEF27-201ENST00000436041 ABCA5Q8WWZ7 1642 aa19.28■□□□□ 0.68
PRAMEF27-201ENST00000436041 AQRO60306 1485 aaKnown RBP eCLIP19.24■□□□□ 0.67
PRAMEF27-201ENST00000436041 CEP162Q5TB80 1403 aa19.24■□□□□ 0.67
PRAMEF27-201ENST00000436041 CUL7Q14999 1698 aa19.2■□□□□ 0.66
PRAMEF27-201ENST00000436041 ZNF608Q9ULD9 1512 aaPredicted RBP19.2■□□□□ 0.66
PRAMEF27-201ENST00000436041 GRIN2BQ13224 1484 aa19.18■□□□□ 0.66
PRAMEF27-201ENST00000436041 CLIP1P30622 1438 aa19.13■□□□□ 0.65
PRAMEF27-201ENST00000436041 FHAD1B1AJZ9 1412 aa19.12■□□□□ 0.65
PRAMEF27-201ENST00000436041 PBRM1Q86U86 1689 aa19.11■□□□□ 0.65
PRAMEF27-201ENST00000436041 RANGAP1P46060 587 aaPredicted RBP19.09■□□□□ 0.65
PRAMEF27-201ENST00000436041 PCGF6Q9BYE7 350 aa19.09■□□□□ 0.65
PRAMEF27-201ENST00000436041 EIF4G3O43432 1585 aaKnown RBP19.09■□□□□ 0.65
PRAMEF27-201ENST00000436041 SNAPC4Q5SXM2 1469 aa19.03■□□□□ 0.64
PRAMEF27-201ENST00000436041 ADAMTS12P58397 1594 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms