RNA–Protein interactions for RNA: ENST00000432331.1

LINC00390-201, long intergenic non-protein coding RNA 390, humanhuman

TSL 5 BASIC

Gene LINC00390, Length 340 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00390-201ENST00000432331 AEBP2Q6ZN18 517 aaPredicted RBP14.62□□□□□ -0.07
LINC00390-201ENST00000432331 NISCHQ9Y2I1 1504 aa14.51□□□□□ -0.09
LINC00390-201ENST00000432331 CHIC1Q5VXU3 224 aa14.12□□□□□ -0.15
LINC00390-201ENST00000432331 CCDC180Q9P1Z9 1646 aa12.79□□□□□ -0.36
LINC00390-201ENST00000432331 PHF23Q9BUL5 403 aaPredicted RBP12.41□□□□□ -0.42
LINC00390-201ENST00000432331 SENP3Q9H4L4 574 aaPredicted RBP12.4□□□□□ -0.42
LINC00390-201ENST00000432331 ABCC9O60706 1549 aa12.22□□□□□ -0.45
LINC00390-201ENST00000432331 ZCCHC6Q5VYS8 1495 aaKnown RBP12.17□□□□□ -0.46
LINC00390-201ENST00000432331 PELP1Q8IZL8 1130 aaKnown RBP12.17□□□□□ -0.46
LINC00390-201ENST00000432331 DCAF1Q9Y4B6 1507 aa12.04□□□□□ -0.48
LINC00390-201ENST00000432331 MYT1Q01538 1121 aa12.02□□□□□ -0.49
LINC00390-201ENST00000432331 MYO15BQ96JP2 1530 aa11.99□□□□□ -0.49
LINC00390-201ENST00000432331 DCAF8L2P0C7V8 631 aa11.95□□□□□ -0.5
LINC00390-201ENST00000432331 NACADO15069 1562 aa11.95□□□□□ -0.5
LINC00390-201ENST00000432331 RB1CC1Q8TDY2 1594 aa11.9□□□□□ -0.5
LINC00390-201ENST00000432331 SCRIBQ14160 1630 aa11.68□□□□□ -0.54
LINC00390-201ENST00000432331 SHROOM4Q9ULL8 1493 aa11.61□□□□□ -0.55
LINC00390-201ENST00000432331 FOXD1Q16676 465 aa11.54□□□□□ -0.56
LINC00390-201ENST00000432331 UNC13AQ9UPW8 1703 aa11.53□□□□□ -0.56
LINC00390-201ENST00000432331 TTBK1Q5TCY1 1321 aaPredicted RBP11.53□□□□□ -0.56
LINC00390-201ENST00000432331 BICRAQ9NZM4 1560 aa11.49□□□□□ -0.57
LINC00390-201ENST00000432331 HRCP23327 699 aa11.45□□□□□ -0.58
LINC00390-201ENST00000432331 PABPN1Q86U42 306 aaKnown RBP eCLIP11.43□□□□□ -0.58
LINC00390-201ENST00000432331 PLPPR3Q6T4P5 718 aa11.39□□□□□ -0.59
LINC00390-201ENST00000432331 BAZ1AQ9NRL2 1556 aaPredicted RBP11.25□□□□□ -0.61
LINC00390-201ENST00000432331 CECR2Q9BXF3 1484 aa11.24□□□□□ -0.61
LINC00390-201ENST00000432331 SMARCA4P51532 1647 aa11.2□□□□□ -0.62
LINC00390-201ENST00000432331 EIF4G1Q04637 1599 aaKnown RBP11.2□□□□□ -0.62
LINC00390-201ENST00000432331 MROH2BQ7Z745 1585 aa11.16□□□□□ -0.62
LINC00390-201ENST00000432331 RSF1Q96T23 1441 aaPredicted RBP11.15□□□□□ -0.62
LINC00390-201ENST00000432331 SMARCA2P51531 1590 aa11.09□□□□□ -0.63
LINC00390-201ENST00000432331 PEG3Q9GZU2 1588 aa11.09□□□□□ -0.63
LINC00390-201ENST00000432331 ATAD2BQ9ULI0 1458 aa11.06□□□□□ -0.64
LINC00390-201ENST00000432331 CC2D2AQ9P2K1 1620 aa11.06□□□□□ -0.64
LINC00390-201ENST00000432331 SUPT5HO00267 1087 aaKnown RBP11.05□□□□□ -0.64
LINC00390-201ENST00000432331 WIZO95785 1651 aa11.04□□□□□ -0.64
LINC00390-201ENST00000432331 HMGXB3Q12766 1538 aa11.02□□□□□ -0.65
LINC00390-201ENST00000432331 NCAPD3P42695 1498 aa11.01□□□□□ -0.65
LINC00390-201ENST00000432331 BAZ1BQ9UIG0 1483 aaKnown RBP11.01□□□□□ -0.65
LINC00390-201ENST00000432331 TOP2AP11388 1531 aaKnown RBP11□□□□□ -0.65
LINC00390-201ENST00000432331 PPP6R1Q9UPN7 881 aa11□□□□□ -0.65
LINC00390-201ENST00000432331 ADRA2BP18089 450 aa10.98□□□□□ -0.65
LINC00390-201ENST00000432331 SCAF1Q9H7N4 1312 aaKnown RBP10.9□□□□□ -0.66
LINC00390-201ENST00000432331 ZEB1P37275 1124 aaPredicted RBP10.87□□□□□ -0.67
LINC00390-201ENST00000432331 DNAJC5BQ9UF47 199 aa10.87□□□□□ -0.67
LINC00390-201ENST00000432331 PIAS4Q8N2W9 510 aaPredicted RBP10.86□□□□□ -0.67
LINC00390-201ENST00000432331 CCDC88BA6NC98 1476 aa10.82□□□□□ -0.68
LINC00390-201ENST00000432331 ERICH6Q7L0X2 663 aa10.74□□□□□ -0.69
LINC00390-201ENST00000432331 PPARGC1BQ86YN6 1023 aaKnown RBP10.73□□□□□ -0.69
LINC00390-201ENST00000432331 CFTRP13569 1480 aa10.71□□□□□ -0.69
LINC00390-201ENST00000432331 CADPSQ9ULU8 1353 aa10.7□□□□□ -0.7
LINC00390-201ENST00000432331 CENPBP07199 599 aaPredicted RBP10.7□□□□□ -0.7
LINC00390-201ENST00000432331 LAMC3Q9Y6N6 1575 aa10.69□□□□□ -0.7
LINC00390-201ENST00000432331 PCGF6Q9BYE7 350 aa10.69□□□□□ -0.7
LINC00390-201ENST00000432331 MSH5O43196 834 aa10.67□□□□□ -0.7
LINC00390-201ENST00000432331 ACIN1Q9UKV3 1341 aaKnown RBP10.66□□□□□ -0.7
LINC00390-201ENST00000432331 NESP48681 1621 aa10.64□□□□□ -0.71
LINC00390-201ENST00000432331 PRDM2Q13029 1718 aa10.61□□□□□ -0.71
LINC00390-201ENST00000432331 PDS5BQ9NTI5 1447 aa10.61□□□□□ -0.71
LINC00390-201ENST00000432331 FANCD2Q9BXW9 1451 aa10.6□□□□□ -0.71
LINC00390-201ENST00000432331 BCL11AQ9H165 835 aa10.59□□□□□ -0.71
LINC00390-201ENST00000432331 CEP164Q9UPV0 1460 aa10.58□□□□□ -0.72
LINC00390-201ENST00000432331 ERCC6Q03468 1493 aa10.55□□□□□ -0.72
LINC00390-201ENST00000432331 TRIM26Q12899 539 aaPredicted RBP10.54□□□□□ -0.72
LINC00390-201ENST00000432331 WRNQ14191 1432 aaPredicted RBP eCLIP10.53□□□□□ -0.72
LINC00390-201ENST00000432331 PRKCSHP14314 528 aaPredicted RBP10.53□□□□□ -0.72
LINC00390-201ENST00000432331 ABCC8Q09428 1581 aa10.52□□□□□ -0.72
LINC00390-201ENST00000432331 APLP2Q06481 763 aa10.52□□□□□ -0.73
LINC00390-201ENST00000432331 KIF21AQ7Z4S6 1674 aa10.51□□□□□ -0.73
LINC00390-201ENST00000432331 MRC2Q9UBG0 1479 aa10.49□□□□□ -0.73
LINC00390-201ENST00000432331 DNMBPQ6XZF7 1577 aa10.48□□□□□ -0.73
LINC00390-201ENST00000432331 SYNJ1O43426 1573 aa10.48□□□□□ -0.73
LINC00390-201ENST00000432331 CUX1P39880 1505 aa10.47□□□□□ -0.73
LINC00390-201ENST00000432331 TOP2BQ02880 1626 aa10.47□□□□□ -0.73
LINC00390-201ENST00000432331 BIVM-ERCC5R4GMW8 1640 aa10.45□□□□□ -0.74
LINC00390-201ENST00000432331 THOC2Q8NI27 1593 aaKnown RBP10.45□□□□□ -0.74
LINC00390-201ENST00000432331 WDR62O43379 1518 aa10.45□□□□□ -0.74
LINC00390-201ENST00000432331 URB2Q14146 1524 aaKnown RBP10.45□□□□□ -0.74
LINC00390-201ENST00000432331 TOPBP1Q92547 1522 aa10.45□□□□□ -0.74
LINC00390-201ENST00000432331 CLSPNQ9HAW4 1339 aa10.45□□□□□ -0.74
LINC00390-201ENST00000432331 TRIM41Q8WV44 630 aa10.44□□□□□ -0.74
LINC00390-201ENST00000432331 GTF3C3Q9Y5Q9 886 aa10.44□□□□□ -0.74
LINC00390-201ENST00000432331 NEUROD1Q13562 356 aa10.42□□□□□ -0.74
LINC00390-201ENST00000432331 FGD5Q6ZNL6 1462 aa10.41□□□□□ -0.74
LINC00390-201ENST00000432331 POLA1P09884 1462 aaPredicted RBP10.39□□□□□ -0.75
LINC00390-201ENST00000432331 ANP32EQ9BTT0 268 aa10.38□□□□□ -0.75
LINC00390-201ENST00000432331 FAM9AQ8IZU1 332 aaPredicted RBP10.37□□□□□ -0.75
LINC00390-201ENST00000432331 IFT140Q96RY7 1462 aa10.34□□□□□ -0.75
LINC00390-201ENST00000432331 SOGA1O94964 1423 aa10.33□□□□□ -0.76
LINC00390-201ENST00000432331 CUX2O14529 1486 aa10.33□□□□□ -0.76
LINC00390-201ENST00000432331 ABCA10Q8WWZ4 1543 aa10.33□□□□□ -0.76
LINC00390-201ENST00000432331 RAD54L2Q9Y4B4 1467 aa10.31□□□□□ -0.76
LINC00390-201ENST00000432331 EEA1Q15075 1411 aa10.31□□□□□ -0.76
LINC00390-201ENST00000432331 TARBP1Q13395 1621 aaKnown RBP10.3□□□□□ -0.76
LINC00390-201ENST00000432331 WDR97A6NE52 1622 aa10.29□□□□□ -0.76
LINC00390-201ENST00000432331 KIF27Q86VH2 1401 aa10.29□□□□□ -0.76
LINC00390-201ENST00000432331 ABCA5Q8WWZ7 1642 aa10.25□□□□□ -0.77
LINC00390-201ENST00000432331 EIF4G3O43432 1585 aaKnown RBP10.24□□□□□ -0.77
LINC00390-201ENST00000432331 TDRD9Q8NDG6 1382 aaKnown RBP10.23□□□□□ -0.77
LINC00390-201ENST00000432331 GAPVD1Q14C86 1478 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms