RNA–Protein interactions for RNA: ENST00000429081.1

RFTN2-202, Transcript of raftlin family member 2, humanhuman

TSL 4

Gene RFTN2, Length 584 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2-202ENST00000429081 AEBP2Q6ZN18 517 aaPredicted RBP23.87■■□□□ 1.41
RFTN2-202ENST00000429081 CHIC1Q5VXU3 224 aa22.56■■□□□ 1.2
RFTN2-202ENST00000429081 SENP3Q9H4L4 574 aaPredicted RBP20.64■□□□□ 0.89
RFTN2-202ENST00000429081 PHF23Q9BUL5 403 aaPredicted RBP20.22■□□□□ 0.83
RFTN2-202ENST00000429081 NISCHQ9Y2I1 1504 aa19.72■□□□□ 0.75
RFTN2-202ENST00000429081 FOXD1Q16676 465 aa19.14■□□□□ 0.65
RFTN2-202ENST00000429081 POTEDQ86YR6 584 aa18.26■□□□□ 0.51
RFTN2-202ENST00000429081 MSH5O43196 834 aa18.23■□□□□ 0.51
RFTN2-202ENST00000429081 CCDC180Q9P1Z9 1646 aa18■□□□□ 0.47
RFTN2-202ENST00000429081 ABCC9O60706 1549 aa17.9■□□□□ 0.46
RFTN2-202ENST00000429081 PIAS4Q8N2W9 510 aaPredicted RBP17.87■□□□□ 0.45
RFTN2-202ENST00000429081 PLPPR3Q6T4P5 718 aa17.86■□□□□ 0.45
RFTN2-202ENST00000429081 PPP6R1Q9UPN7 881 aa17.53■□□□□ 0.4
RFTN2-202ENST00000429081 ADRA2BP18089 450 aa17.49■□□□□ 0.39
RFTN2-202ENST00000429081 RB1CC1Q8TDY2 1594 aa17.07■□□□□ 0.32
RFTN2-202ENST00000429081 DNAJC5BQ9UF47 199 aa16.95■□□□□ 0.3
RFTN2-202ENST00000429081 UNC13AQ9UPW8 1703 aa16.94■□□□□ 0.3
RFTN2-202ENST00000429081 NACADO15069 1562 aa16.92■□□□□ 0.3
RFTN2-202ENST00000429081 BICRAQ9NZM4 1560 aa16.71■□□□□ 0.27
RFTN2-202ENST00000429081 MYO15BQ96JP2 1530 aa16.7■□□□□ 0.26
RFTN2-202ENST00000429081 SHROOM4Q9ULL8 1493 aa16.46■□□□□ 0.23
RFTN2-202ENST00000429081 PABPN1Q86U42 306 aaKnown RBP eCLIP16.45■□□□□ 0.22
RFTN2-202ENST00000429081 DCAF1Q9Y4B6 1507 aa16.39■□□□□ 0.21
RFTN2-202ENST00000429081 ZCCHC6Q5VYS8 1495 aaKnown RBP16.38■□□□□ 0.21
RFTN2-202ENST00000429081 CC2D2AQ9P2K1 1620 aa16.31■□□□□ 0.2
RFTN2-202ENST00000429081 SCAF1Q9H7N4 1312 aaKnown RBP16.26■□□□□ 0.19
RFTN2-202ENST00000429081 DMRT2Q9Y5R5 561 aa16.26■□□□□ 0.19
RFTN2-202ENST00000429081 EIF4G1Q04637 1599 aaKnown RBP16.23■□□□□ 0.19
RFTN2-202ENST00000429081 SCRIBQ14160 1630 aa16.2■□□□□ 0.18
RFTN2-202ENST00000429081 DCAF8L2P0C7V8 631 aa16.2■□□□□ 0.18
RFTN2-202ENST00000429081 CECR2Q9BXF3 1484 aa16.17■□□□□ 0.18
RFTN2-202ENST00000429081 MAPK8IP2Q13387 824 aaPredicted RBP16.13■□□□□ 0.17
RFTN2-202ENST00000429081 CACNB1Q02641 598 aaPredicted RBP15.81■□□□□ 0.12
RFTN2-202ENST00000429081 DNAJC5Q9H3Z4 198 aa15.7■□□□□ 0.1
RFTN2-202ENST00000429081 CUX2O14529 1486 aa15.64■□□□□ 0.09
RFTN2-202ENST00000429081 DCAF8L1A6NGE4 600 aa15.62■□□□□ 0.09
RFTN2-202ENST00000429081 NCAPD3P42695 1498 aa15.57■□□□□ 0.08
RFTN2-202ENST00000429081 HMGXB3Q12766 1538 aa15.56■□□□□ 0.08
RFTN2-202ENST00000429081 PPP4R3CPQ6ZMV5 832 aa15.53■□□□□ 0.08
RFTN2-202ENST00000429081 HOXD11P31277 338 aaPredicted RBP15.52■□□□□ 0.08
RFTN2-202ENST00000429081 SMARCA4P51532 1647 aa15.51■□□□□ 0.07
RFTN2-202ENST00000429081 ATAD2BQ9ULI0 1458 aa15.48■□□□□ 0.07
RFTN2-202ENST00000429081 THOC2Q8NI27 1593 aaKnown RBP15.48■□□□□ 0.07
RFTN2-202ENST00000429081 SMARCA2P51531 1590 aa15.45■□□□□ 0.06
RFTN2-202ENST00000429081 PEG3Q9GZU2 1588 aa15.44■□□□□ 0.06
RFTN2-202ENST00000429081 RNF39Q9H2S5 420 aa15.42■□□□□ 0.06
RFTN2-202ENST00000429081 ERCC6Q03468 1493 aa15.41■□□□□ 0.06
RFTN2-202ENST00000429081 CNKSR2Q8WXI2 1034 aa15.39■□□□□ 0.05
RFTN2-202ENST00000429081 NESP48681 1621 aa15.38■□□□□ 0.05
RFTN2-202ENST00000429081 KIF21AQ7Z4S6 1674 aa15.35■□□□□ 0.05
RFTN2-202ENST00000429081 RNF216Q9NWF9 866 aaPredicted RBP15.34■□□□□ 0.05
RFTN2-202ENST00000429081 BAZ1AQ9NRL2 1556 aaPredicted RBP15.33■□□□□ 0.05
RFTN2-202ENST00000429081 LAMC3Q9Y6N6 1575 aa15.32■□□□□ 0.04
RFTN2-202ENST00000429081 BAZ1BQ9UIG0 1483 aaKnown RBP15.27■□□□□ 0.04
RFTN2-202ENST00000429081 C1QBPQ07021 282 aaKnown RBP15.26■□□□□ 0.03
RFTN2-202ENST00000429081 MROH2BQ7Z745 1585 aa15.19■□□□□ 0.02
RFTN2-202ENST00000429081 WDR62O43379 1518 aa15.13■□□□□ 0.01
RFTN2-202ENST00000429081 PDS5BQ9NTI5 1447 aa15.05■□□□□ -0
RFTN2-202ENST00000429081 MRC2Q9UBG0 1479 aa15.05■□□□□ -0
RFTN2-202ENST00000429081 WIZO95785 1651 aa15.03■□□□□ -0
RFTN2-202ENST00000429081 CADPSQ9ULU8 1353 aa14.98□□□□□ -0.01
RFTN2-202ENST00000429081 PRDM2Q13029 1718 aa14.98□□□□□ -0.01
RFTN2-202ENST00000429081 NCBP3Q53F19 620 aaKnown RBP14.97□□□□□ -0.01
RFTN2-202ENST00000429081 CEP164Q9UPV0 1460 aa14.92□□□□□ -0.02
RFTN2-202ENST00000429081 CFTRP13569 1480 aa14.87□□□□□ -0.03
RFTN2-202ENST00000429081 FANCD2Q9BXW9 1451 aa14.87□□□□□ -0.03
RFTN2-202ENST00000429081 TOP2AP11388 1531 aaKnown RBP14.84□□□□□ -0.03
RFTN2-202ENST00000429081 URB2Q14146 1524 aaKnown RBP14.84□□□□□ -0.03
RFTN2-202ENST00000429081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.83□□□□□ -0.04
RFTN2-202ENST00000429081 RIMBP3CA6NJZ7 1639 aa14.77□□□□□ -0.05
RFTN2-202ENST00000429081 RIMBP3BA6NNM3 1639 aa14.77□□□□□ -0.05
RFTN2-202ENST00000429081 RIMBP3Q9UFD9 1639 aa14.77□□□□□ -0.05
RFTN2-202ENST00000429081 TRIM41Q8WV44 630 aa14.73□□□□□ -0.05
RFTN2-202ENST00000429081 RSF1Q96T23 1441 aaPredicted RBP14.72□□□□□ -0.05
RFTN2-202ENST00000429081 EIF4G3O43432 1585 aaKnown RBP14.68□□□□□ -0.06
RFTN2-202ENST00000429081 CHD1O14646 1710 aa14.65□□□□□ -0.06
RFTN2-202ENST00000429081 ARHGEF11O15085 1522 aa14.65□□□□□ -0.06
RFTN2-202ENST00000429081 ZNF608Q9ULD9 1512 aaPredicted RBP14.64□□□□□ -0.07
RFTN2-202ENST00000429081 IFT140Q96RY7 1462 aa14.63□□□□□ -0.07
RFTN2-202ENST00000429081 TOPBP1Q92547 1522 aa14.61□□□□□ -0.07
RFTN2-202ENST00000429081 TARBP1Q13395 1621 aaKnown RBP14.61□□□□□ -0.07
RFTN2-202ENST00000429081 OSCARQ8IYS5 282 aa14.59□□□□□ -0.07
RFTN2-202ENST00000429081 DNMBPQ6XZF7 1577 aa14.59□□□□□ -0.07
RFTN2-202ENST00000429081 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
RFTN2-202ENST00000429081 CCDC88BA6NC98 1476 aa14.55□□□□□ -0.08
RFTN2-202ENST00000429081 ARAP1Q96P48 1450 aa14.5□□□□□ -0.09
RFTN2-202ENST00000429081 ABCC8Q09428 1581 aa14.5□□□□□ -0.09
RFTN2-202ENST00000429081 WDR97A6NE52 1622 aa14.48□□□□□ -0.09
RFTN2-202ENST00000429081 CLASP1Q7Z460 1538 aa14.46□□□□□ -0.1
RFTN2-202ENST00000429081 POLA1P09884 1462 aaPredicted RBP14.45□□□□□ -0.1
RFTN2-202ENST00000429081 AQRO60306 1485 aaKnown RBP eCLIP14.38□□□□□ -0.11
RFTN2-202ENST00000429081 U3KPZ7 1027 aaPredicted RBP14.38□□□□□ -0.11
RFTN2-202ENST00000429081 PBRM1Q86U86 1689 aa14.36□□□□□ -0.11
RFTN2-202ENST00000429081 CAPN15O75808 1086 aa14.35□□□□□ -0.11
RFTN2-202ENST00000429081 SNAPC4Q5SXM2 1469 aa14.31□□□□□ -0.12
RFTN2-202ENST00000429081 RAD54L2Q9Y4B4 1467 aa14.31□□□□□ -0.12
RFTN2-202ENST00000429081 SYNJ1O43426 1573 aa14.31□□□□□ -0.12
RFTN2-202ENST00000429081 MAGI1Q96QZ7 1491 aaPredicted RBP14.31□□□□□ -0.12
RFTN2-202ENST00000429081 CUX1P39880 1505 aa14.31□□□□□ -0.12
RFTN2-202ENST00000429081 FGD5Q6ZNL6 1462 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms