RNA–Protein interactions for RNA: ENST00000426738.6

MS4A6A-203, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 5 BASIC

Gene MS4A6A, Length 1,736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-203ENST00000426738 NISCHQ9Y2I1 1504 aa18.17■□□□□ 0.5
MS4A6A-203ENST00000426738 AEBP2Q6ZN18 517 aaPredicted RBP16.89■□□□□ 0.29
MS4A6A-203ENST00000426738 CHIC1Q5VXU3 224 aa15.88■□□□□ 0.13
MS4A6A-203ENST00000426738 CCDC180Q9P1Z9 1646 aa15.83■□□□□ 0.12
MS4A6A-203ENST00000426738 ZCCHC6Q5VYS8 1495 aaKnown RBP15.34■□□□□ 0.05
MS4A6A-203ENST00000426738 DCAF1Q9Y4B6 1507 aa15.05■□□□□ -0
MS4A6A-203ENST00000426738 SHROOM4Q9ULL8 1493 aa14.99□□□□□ -0.01
MS4A6A-203ENST00000426738 DCAF8L2P0C7V8 631 aa14.86□□□□□ -0.03
MS4A6A-203ENST00000426738 PELP1Q8IZL8 1130 aaKnown RBP14.82□□□□□ -0.04
MS4A6A-203ENST00000426738 MYO15BQ96JP2 1530 aa14.77□□□□□ -0.05
MS4A6A-203ENST00000426738 SENP3Q9H4L4 574 aaPredicted RBP14.63□□□□□ -0.07
MS4A6A-203ENST00000426738 ABCC9O60706 1549 aa14.62□□□□□ -0.07
MS4A6A-203ENST00000426738 NACADO15069 1562 aa14.62□□□□□ -0.07
MS4A6A-203ENST00000426738 MYT1Q01538 1121 aa14.57□□□□□ -0.08
MS4A6A-203ENST00000426738 SCRIBQ14160 1630 aa14.55□□□□□ -0.08
MS4A6A-203ENST00000426738 SUPT5HO00267 1087 aaKnown RBP14.53□□□□□ -0.08
MS4A6A-203ENST00000426738 RB1CC1Q8TDY2 1594 aa14.44□□□□□ -0.1
MS4A6A-203ENST00000426738 PHF23Q9BUL5 403 aaPredicted RBP14.27□□□□□ -0.12
MS4A6A-203ENST00000426738 UNC13AQ9UPW8 1703 aa14.22□□□□□ -0.13
MS4A6A-203ENST00000426738 RSF1Q96T23 1441 aaPredicted RBP14.17□□□□□ -0.14
MS4A6A-203ENST00000426738 CECR2Q9BXF3 1484 aa14.07□□□□□ -0.16
MS4A6A-203ENST00000426738 MROH2BQ7Z745 1585 aa14.05□□□□□ -0.16
MS4A6A-203ENST00000426738 BAZ1AQ9NRL2 1556 aaPredicted RBP14.05□□□□□ -0.16
MS4A6A-203ENST00000426738 POTEDQ86YR6 584 aa14.01□□□□□ -0.17
MS4A6A-203ENST00000426738 HRCP23327 699 aa14.01□□□□□ -0.17
MS4A6A-203ENST00000426738 WIZO95785 1651 aa13.99□□□□□ -0.17
MS4A6A-203ENST00000426738 TTBK1Q5TCY1 1321 aaPredicted RBP13.98□□□□□ -0.17
MS4A6A-203ENST00000426738 BICRAQ9NZM4 1560 aa13.97□□□□□ -0.17
MS4A6A-203ENST00000426738 SMARCA4P51532 1647 aa13.96□□□□□ -0.17
MS4A6A-203ENST00000426738 TOP2AP11388 1531 aaKnown RBP13.85□□□□□ -0.19
MS4A6A-203ENST00000426738 PABPN1Q86U42 306 aaKnown RBP eCLIP13.78□□□□□ -0.2
MS4A6A-203ENST00000426738 PEG3Q9GZU2 1588 aa13.76□□□□□ -0.21
MS4A6A-203ENST00000426738 EIF4G1Q04637 1599 aaKnown RBP13.74□□□□□ -0.21
MS4A6A-203ENST00000426738 SMARCA2P51531 1590 aa13.73□□□□□ -0.21
MS4A6A-203ENST00000426738 CCDC88BA6NC98 1476 aa13.67□□□□□ -0.22
MS4A6A-203ENST00000426738 TRIM41Q8WV44 630 aa13.66□□□□□ -0.22
MS4A6A-203ENST00000426738 FOXD1Q16676 465 aa13.64□□□□□ -0.23
MS4A6A-203ENST00000426738 ATAD2BQ9ULI0 1458 aa13.6□□□□□ -0.23
MS4A6A-203ENST00000426738 BAZ1BQ9UIG0 1483 aaKnown RBP13.58□□□□□ -0.23
MS4A6A-203ENST00000426738 SCAF1Q9H7N4 1312 aaKnown RBP13.53□□□□□ -0.24
MS4A6A-203ENST00000426738 HMGXB3Q12766 1538 aa13.5□□□□□ -0.25
MS4A6A-203ENST00000426738 ABCC8Q09428 1581 aa13.5□□□□□ -0.25
MS4A6A-203ENST00000426738 LOC105371045A0A1W2PR82 267 aa13.49□□□□□ -0.25
MS4A6A-203ENST00000426738 NCAPD3P42695 1498 aa13.43□□□□□ -0.26
MS4A6A-203ENST00000426738 FAM9AQ8IZU1 332 aaPredicted RBP13.4□□□□□ -0.26
MS4A6A-203ENST00000426738 PPARGC1BQ86YN6 1023 aaKnown RBP13.37□□□□□ -0.27
MS4A6A-203ENST00000426738 WRNQ14191 1432 aaPredicted RBP eCLIP13.36□□□□□ -0.27
MS4A6A-203ENST00000426738 EEA1Q15075 1411 aa13.35□□□□□ -0.27
MS4A6A-203ENST00000426738 PRDM2Q13029 1718 aa13.34□□□□□ -0.27
MS4A6A-203ENST00000426738 SYNJ1O43426 1573 aa13.33□□□□□ -0.28
MS4A6A-203ENST00000426738 CC2D2AQ9P2K1 1620 aa13.27□□□□□ -0.28
MS4A6A-203ENST00000426738 BIVM-ERCC5R4GMW8 1640 aa13.27□□□□□ -0.28
MS4A6A-203ENST00000426738 TOP2BQ02880 1626 aa13.26□□□□□ -0.29
MS4A6A-203ENST00000426738 SOGA1O94964 1423 aa13.25□□□□□ -0.29
MS4A6A-203ENST00000426738 PRKCSHP14314 528 aaPredicted RBP13.25□□□□□ -0.29
MS4A6A-203ENST00000426738 CFTRP13569 1480 aa13.22□□□□□ -0.29
MS4A6A-203ENST00000426738 EHMT2Q96KQ7 1210 aa13.2□□□□□ -0.3
MS4A6A-203ENST00000426738 PCGF6Q9BYE7 350 aa13.2□□□□□ -0.3
MS4A6A-203ENST00000426738 KIF21BO75037 1637 aa13.19□□□□□ -0.3
MS4A6A-203ENST00000426738 RUSC2Q8N2Y8 1516 aa13.17□□□□□ -0.3
MS4A6A-203ENST00000426738 GOLGA3Q08378 1498 aa13.17□□□□□ -0.3
MS4A6A-203ENST00000426738 CSRNP3Q8WYN3 585 aa13.16□□□□□ -0.3
MS4A6A-203ENST00000426738 BCL11AQ9H165 835 aa13.16□□□□□ -0.3
MS4A6A-203ENST00000426738 MSH5O43196 834 aa13.15□□□□□ -0.3
MS4A6A-203ENST00000426738 TRIM26Q12899 539 aaPredicted RBP13.15□□□□□ -0.3
MS4A6A-203ENST00000426738 ERICH6Q7L0X2 663 aa13.15□□□□□ -0.3
MS4A6A-203ENST00000426738 CEP164Q9UPV0 1460 aa13.15□□□□□ -0.3
MS4A6A-203ENST00000426738 TNIKQ9UKE5 1360 aa13.14□□□□□ -0.31
MS4A6A-203ENST00000426738 CUX1P39880 1505 aa13.13□□□□□ -0.31
MS4A6A-203ENST00000426738 CEP162Q5TB80 1403 aa13.11□□□□□ -0.31
MS4A6A-203ENST00000426738 CADPSQ9ULU8 1353 aa13.1□□□□□ -0.31
MS4A6A-203ENST00000426738 APLP2Q06481 763 aa13.08□□□□□ -0.32
MS4A6A-203ENST00000426738 ACIN1Q9UKV3 1341 aaKnown RBP13.08□□□□□ -0.32
MS4A6A-203ENST00000426738 UBTFP17480 764 aaKnown RBP13.04□□□□□ -0.32
MS4A6A-203ENST00000426738 ERICH3Q5RHP9 1530 aa13.03□□□□□ -0.32
MS4A6A-203ENST00000426738 CENPBP07199 599 aaPredicted RBP13.03□□□□□ -0.32
MS4A6A-203ENST00000426738 ZEB1P37275 1124 aaPredicted RBP13.03□□□□□ -0.32
MS4A6A-203ENST00000426738 LAMC3Q9Y6N6 1575 aa13.01□□□□□ -0.33
MS4A6A-203ENST00000426738 KIF27Q86VH2 1401 aa13□□□□□ -0.33
MS4A6A-203ENST00000426738 FANCD2Q9BXW9 1451 aa13□□□□□ -0.33
MS4A6A-203ENST00000426738 RAPGEF2Q9Y4G8 1499 aa12.99□□□□□ -0.33
MS4A6A-203ENST00000426738 DNMBPQ6XZF7 1577 aa12.97□□□□□ -0.33
MS4A6A-203ENST00000426738 PRXQ9BXM0 1461 aa12.96□□□□□ -0.33
MS4A6A-203ENST00000426738 FGD5Q6ZNL6 1462 aa12.95□□□□□ -0.34
MS4A6A-203ENST00000426738 CLIP1P30622 1438 aa12.95□□□□□ -0.34
MS4A6A-203ENST00000426738 CUX2O14529 1486 aa12.91□□□□□ -0.34
MS4A6A-203ENST00000426738 NESP48681 1621 aa12.91□□□□□ -0.34
MS4A6A-203ENST00000426738 TOPBP1Q92547 1522 aa12.88□□□□□ -0.35
MS4A6A-203ENST00000426738 VPS8Q8N3P4 1428 aa12.88□□□□□ -0.35
MS4A6A-203ENST00000426738 NEUROD1Q13562 356 aa12.88□□□□□ -0.35
MS4A6A-203ENST00000426738 GTF3C3Q9Y5Q9 886 aa12.87□□□□□ -0.35
MS4A6A-203ENST00000426738 KIF21AQ7Z4S6 1674 aa12.86□□□□□ -0.35
MS4A6A-203ENST00000426738 WDR97A6NE52 1622 aa12.85□□□□□ -0.35
MS4A6A-203ENST00000426738 PDS5BQ9NTI5 1447 aa12.85□□□□□ -0.35
MS4A6A-203ENST00000426738 ABCA10Q8WWZ4 1543 aa12.84□□□□□ -0.35
MS4A6A-203ENST00000426738 POLA1P09884 1462 aaPredicted RBP12.84□□□□□ -0.35
MS4A6A-203ENST00000426738 CUL7Q14999 1698 aa12.82□□□□□ -0.36
MS4A6A-203ENST00000426738 URB2Q14146 1524 aaKnown RBP12.8□□□□□ -0.36
MS4A6A-203ENST00000426738 IGF1RP08069 1367 aa12.8□□□□□ -0.36
MS4A6A-203ENST00000426738 ARAP1Q96P48 1450 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms