RNA–Protein interactions for RNA: ENST00000421239.6

ZNF578-201, Transcript of zinc finger protein 578, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF578, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF578-201ENST00000421239 NISCHQ9Y2I1 1504 aa14.46□□□□□ -0.1
ZNF578-201ENST00000421239 CCDC180Q9P1Z9 1646 aa12.57□□□□□ -0.4
ZNF578-201ENST00000421239 ZCCHC6Q5VYS8 1495 aaKnown RBP12.15□□□□□ -0.46
ZNF578-201ENST00000421239 DNAJC5Q9H3Z4 198 aa12.15□□□□□ -0.47
ZNF578-201ENST00000421239 AEBP2Q6ZN18 517 aaPredicted RBP11.99□□□□□ -0.49
ZNF578-201ENST00000421239 DCAF1Q9Y4B6 1507 aa11.97□□□□□ -0.49
ZNF578-201ENST00000421239 DCAF8L2P0C7V8 631 aa11.91□□□□□ -0.5
ZNF578-201ENST00000421239 ABCC9O60706 1549 aa11.88□□□□□ -0.51
ZNF578-201ENST00000421239 MYO15BQ96JP2 1530 aa11.83□□□□□ -0.52
ZNF578-201ENST00000421239 SHROOM4Q9ULL8 1493 aa11.78□□□□□ -0.52
ZNF578-201ENST00000421239 NACADO15069 1562 aa11.73□□□□□ -0.53
ZNF578-201ENST00000421239 RB1CC1Q8TDY2 1594 aa11.62□□□□□ -0.55
ZNF578-201ENST00000421239 SCRIBQ14160 1630 aa11.56□□□□□ -0.56
ZNF578-201ENST00000421239 DNAJC5BQ9UF47 199 aa11.51□□□□□ -0.57
ZNF578-201ENST00000421239 CHIC1Q5VXU3 224 aa11.39□□□□□ -0.59
ZNF578-201ENST00000421239 SUPT5HO00267 1087 aaKnown RBP11.36□□□□□ -0.59
ZNF578-201ENST00000421239 UNC13AQ9UPW8 1703 aa11.31□□□□□ -0.6
ZNF578-201ENST00000421239 BICRAQ9NZM4 1560 aa11.25□□□□□ -0.61
ZNF578-201ENST00000421239 RSF1Q96T23 1441 aaPredicted RBP11.23□□□□□ -0.61
ZNF578-201ENST00000421239 CECR2Q9BXF3 1484 aa11.22□□□□□ -0.61
ZNF578-201ENST00000421239 PABPN1Q86U42 306 aaKnown RBP eCLIP11.21□□□□□ -0.61
ZNF578-201ENST00000421239 MROH2BQ7Z745 1585 aa11.16□□□□□ -0.62
ZNF578-201ENST00000421239 BAZ1AQ9NRL2 1556 aaPredicted RBP11.16□□□□□ -0.62
ZNF578-201ENST00000421239 SMARCA4P51532 1647 aa11.09□□□□□ -0.63
ZNF578-201ENST00000421239 WIZO95785 1651 aa11.04□□□□□ -0.64
ZNF578-201ENST00000421239 PEG3Q9GZU2 1588 aa10.97□□□□□ -0.65
ZNF578-201ENST00000421239 TOP2AP11388 1531 aaKnown RBP10.97□□□□□ -0.65
ZNF578-201ENST00000421239 ATAD2BQ9ULI0 1458 aa10.92□□□□□ -0.66
ZNF578-201ENST00000421239 SMARCA2P51531 1590 aa10.92□□□□□ -0.66
ZNF578-201ENST00000421239 EIF4G1Q04637 1599 aaKnown RBP10.91□□□□□ -0.66
ZNF578-201ENST00000421239 BAZ1BQ9UIG0 1483 aaKnown RBP10.86□□□□□ -0.67
ZNF578-201ENST00000421239 CCDC88BA6NC98 1476 aa10.85□□□□□ -0.67
ZNF578-201ENST00000421239 NCAPD3P42695 1498 aa10.84□□□□□ -0.67
ZNF578-201ENST00000421239 HMGXB3Q12766 1538 aa10.81□□□□□ -0.68
ZNF578-201ENST00000421239 CC2D2AQ9P2K1 1620 aa10.74□□□□□ -0.69
ZNF578-201ENST00000421239 ILDR1Q86SU0 546 aaPredicted RBP10.72□□□□□ -0.69
ZNF578-201ENST00000421239 TRIM41Q8WV44 630 aa10.69□□□□□ -0.7
ZNF578-201ENST00000421239 CFTRP13569 1480 aa10.6□□□□□ -0.71
ZNF578-201ENST00000421239 ABCC8Q09428 1581 aa10.6□□□□□ -0.71
ZNF578-201ENST00000421239 WRNQ14191 1432 aaPredicted RBP eCLIP10.56□□□□□ -0.72
ZNF578-201ENST00000421239 CADPSQ9ULU8 1353 aa10.56□□□□□ -0.72
ZNF578-201ENST00000421239 SYNJ1O43426 1573 aa10.49□□□□□ -0.73
ZNF578-201ENST00000421239 FAM9AQ8IZU1 332 aaPredicted RBP10.48□□□□□ -0.73
ZNF578-201ENST00000421239 PRDM2Q13029 1718 aa10.48□□□□□ -0.73
ZNF578-201ENST00000421239 LOC105371045A0A1W2PR82 267 aa10.46□□□□□ -0.73
ZNF578-201ENST00000421239 TOP2BQ02880 1626 aa10.46□□□□□ -0.73
ZNF578-201ENST00000421239 EEA1Q15075 1411 aa10.45□□□□□ -0.74
ZNF578-201ENST00000421239 LAMC3Q9Y6N6 1575 aa10.44□□□□□ -0.74
ZNF578-201ENST00000421239 BIVM-ERCC5R4GMW8 1640 aa10.44□□□□□ -0.74
ZNF578-201ENST00000421239 CUX1P39880 1505 aa10.43□□□□□ -0.74
ZNF578-201ENST00000421239 FANCD2Q9BXW9 1451 aa10.43□□□□□ -0.74
ZNF578-201ENST00000421239 SOGA1O94964 1423 aa10.43□□□□□ -0.74
ZNF578-201ENST00000421239 NESP48681 1621 aa10.42□□□□□ -0.74
ZNF578-201ENST00000421239 PDS5BQ9NTI5 1447 aa10.39□□□□□ -0.75
ZNF578-201ENST00000421239 CSRNP3Q8WYN3 585 aa10.38□□□□□ -0.75
ZNF578-201ENST00000421239 RUSC2Q8N2Y8 1516 aa10.38□□□□□ -0.75
ZNF578-201ENST00000421239 CEP164Q9UPV0 1460 aa10.36□□□□□ -0.75
ZNF578-201ENST00000421239 SENP3Q9H4L4 574 aaPredicted RBP10.36□□□□□ -0.75
ZNF578-201ENST00000421239 DNMBPQ6XZF7 1577 aa10.34□□□□□ -0.75
ZNF578-201ENST00000421239 FGD5Q6ZNL6 1462 aa10.32□□□□□ -0.76
ZNF578-201ENST00000421239 TOPBP1Q92547 1522 aa10.32□□□□□ -0.76
ZNF578-201ENST00000421239 EHMT2Q96KQ7 1210 aa10.31□□□□□ -0.76
ZNF578-201ENST00000421239 KIF27Q86VH2 1401 aa10.3□□□□□ -0.76
ZNF578-201ENST00000421239 URB2Q14146 1524 aaKnown RBP10.3□□□□□ -0.76
ZNF578-201ENST00000421239 GOLGA3Q08378 1498 aa10.29□□□□□ -0.76
ZNF578-201ENST00000421239 KIF21BO75037 1637 aa10.28□□□□□ -0.76
ZNF578-201ENST00000421239 KIF21AQ7Z4S6 1674 aa10.27□□□□□ -0.77
ZNF578-201ENST00000421239 TNIKQ9UKE5 1360 aa10.27□□□□□ -0.77
ZNF578-201ENST00000421239 POLA1P09884 1462 aaPredicted RBP10.26□□□□□ -0.77
ZNF578-201ENST00000421239 CUX2O14529 1486 aa10.26□□□□□ -0.77
ZNF578-201ENST00000421239 MRC2Q9UBG0 1479 aa10.24□□□□□ -0.77
ZNF578-201ENST00000421239 ABCA10Q8WWZ4 1543 aa10.24□□□□□ -0.77
ZNF578-201ENST00000421239 PRXQ9BXM0 1461 aa10.24□□□□□ -0.77
ZNF578-201ENST00000421239 RAD54L2Q9Y4B4 1467 aa10.23□□□□□ -0.77
ZNF578-201ENST00000421239 UBTFP17480 764 aaKnown RBP10.23□□□□□ -0.77
ZNF578-201ENST00000421239 ERICH3Q5RHP9 1530 aa10.22□□□□□ -0.77
ZNF578-201ENST00000421239 IGF1RP08069 1367 aa10.22□□□□□ -0.77
ZNF578-201ENST00000421239 RAPGEF2Q9Y4G8 1499 aa10.22□□□□□ -0.77
ZNF578-201ENST00000421239 CEP162Q5TB80 1403 aa10.2□□□□□ -0.78
ZNF578-201ENST00000421239 ERCC6Q03468 1493 aa10.19□□□□□ -0.78
ZNF578-201ENST00000421239 WDR62O43379 1518 aa10.18□□□□□ -0.78
ZNF578-201ENST00000421239 WDR97A6NE52 1622 aa10.17□□□□□ -0.78
ZNF578-201ENST00000421239 PHF23Q9BUL5 403 aaPredicted RBP10.16□□□□□ -0.78
ZNF578-201ENST00000421239 CARMIL1Q5VZK9 1371 aa10.16□□□□□ -0.78
ZNF578-201ENST00000421239 SOCS7O14512 581 aa10.15□□□□□ -0.78
ZNF578-201ENST00000421239 TARBP1Q13395 1621 aaKnown RBP10.15□□□□□ -0.79
ZNF578-201ENST00000421239 TDRD9Q8NDG6 1382 aaKnown RBP10.14□□□□□ -0.79
ZNF578-201ENST00000421239 IFT140Q96RY7 1462 aa10.13□□□□□ -0.79
ZNF578-201ENST00000421239 ABCA5Q8WWZ7 1642 aa10.13□□□□□ -0.79
ZNF578-201ENST00000421239 GAPVD1Q14C86 1478 aa10.13□□□□□ -0.79
ZNF578-201ENST00000421239 THOC2Q8NI27 1593 aaKnown RBP10.12□□□□□ -0.79
ZNF578-201ENST00000421239 CLIP1P30622 1438 aa10.12□□□□□ -0.79
ZNF578-201ENST00000421239 CUL7Q14999 1698 aa10.11□□□□□ -0.79
ZNF578-201ENST00000421239 AQRO60306 1485 aaKnown RBP eCLIP10.06□□□□□ -0.8
ZNF578-201ENST00000421239 GRIN2BQ13224 1484 aa10.06□□□□□ -0.8
ZNF578-201ENST00000421239 ZNF608Q9ULD9 1512 aaPredicted RBP10.04□□□□□ -0.8
ZNF578-201ENST00000421239 VPS8Q8N3P4 1428 aa10.04□□□□□ -0.8
ZNF578-201ENST00000421239 RANGAP1P46060 587 aaPredicted RBP10.04□□□□□ -0.8
ZNF578-201ENST00000421239 FHAD1B1AJZ9 1412 aa10.03□□□□□ -0.8
ZNF578-201ENST00000421239 TRIM26Q12899 539 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms