RNA–Protein interactions for RNA: ENST00000414367.5

PCDH15-216, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 3,357 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-216ENST00000414367 NISCHQ9Y2I1 1504 aa15.22■□□□□ 0.03
PCDH15-216ENST00000414367 ABCC9O60706 1549 aa13.92□□□□□ -0.18
PCDH15-216ENST00000414367 DCAF8L2P0C7V8 631 aa13.84□□□□□ -0.19
PCDH15-216ENST00000414367 CCDC180Q9P1Z9 1646 aa13.33□□□□□ -0.28
PCDH15-216ENST00000414367 PABPN1Q86U42 306 aaKnown RBP eCLIP13.2□□□□□ -0.3
PCDH15-216ENST00000414367 RB1CC1Q8TDY2 1594 aa12.96□□□□□ -0.33
PCDH15-216ENST00000414367 DNAJC5BQ9UF47 199 aa12.94□□□□□ -0.34
PCDH15-216ENST00000414367 NACADO15069 1562 aa12.8□□□□□ -0.36
PCDH15-216ENST00000414367 SCRIBQ14160 1630 aa12.57□□□□□ -0.4
PCDH15-216ENST00000414367 SHROOM4Q9ULL8 1493 aa12.57□□□□□ -0.4
PCDH15-216ENST00000414367 ZCCHC6Q5VYS8 1495 aaKnown RBP12.54□□□□□ -0.4
PCDH15-216ENST00000414367 CECR2Q9BXF3 1484 aa12.44□□□□□ -0.42
PCDH15-216ENST00000414367 MYO15BQ96JP2 1530 aa12.42□□□□□ -0.42
PCDH15-216ENST00000414367 BICRAQ9NZM4 1560 aa12.36□□□□□ -0.43
PCDH15-216ENST00000414367 DCAF1Q9Y4B6 1507 aa12.32□□□□□ -0.44
PCDH15-216ENST00000414367 UNC13AQ9UPW8 1703 aa12.3□□□□□ -0.44
PCDH15-216ENST00000414367 CC2D2AQ9P2K1 1620 aa12.27□□□□□ -0.45
PCDH15-216ENST00000414367 EIF4G1Q04637 1599 aaKnown RBP12.24□□□□□ -0.45
PCDH15-216ENST00000414367 ERCC6Q03468 1493 aa12.13□□□□□ -0.47
PCDH15-216ENST00000414367 BAZ1BQ9UIG0 1483 aaKnown RBP11.95□□□□□ -0.5
PCDH15-216ENST00000414367 ATAD2BQ9ULI0 1458 aa11.92□□□□□ -0.5
PCDH15-216ENST00000414367 DNAJC5Q9H3Z4 198 aa11.88□□□□□ -0.51
PCDH15-216ENST00000414367 NCAPD3P42695 1498 aa11.88□□□□□ -0.51
PCDH15-216ENST00000414367 SUPT5HO00267 1087 aaKnown RBP11.87□□□□□ -0.51
PCDH15-216ENST00000414367 SMARCA2P51531 1590 aa11.86□□□□□ -0.51
PCDH15-216ENST00000414367 TRIM41Q8WV44 630 aa11.85□□□□□ -0.51
PCDH15-216ENST00000414367 NESP48681 1621 aa11.84□□□□□ -0.51
PCDH15-216ENST00000414367 BAZ1AQ9NRL2 1556 aaPredicted RBP11.84□□□□□ -0.51
PCDH15-216ENST00000414367 SMARCA4P51532 1647 aa11.79□□□□□ -0.52
PCDH15-216ENST00000414367 MROH2BQ7Z745 1585 aa11.78□□□□□ -0.52
PCDH15-216ENST00000414367 PDS5BQ9NTI5 1447 aa11.78□□□□□ -0.52
PCDH15-216ENST00000414367 FBLN2P98095 1184 aa11.75□□□□□ -0.53
PCDH15-216ENST00000414367 CADPSQ9ULU8 1353 aa11.71□□□□□ -0.53
PCDH15-216ENST00000414367 CUX2O14529 1486 aa11.67□□□□□ -0.54
PCDH15-216ENST00000414367 HMGXB3Q12766 1538 aa11.67□□□□□ -0.54
PCDH15-216ENST00000414367 RSF1Q96T23 1441 aaPredicted RBP11.62□□□□□ -0.55
PCDH15-216ENST00000414367 OSCARQ8IYS5 282 aa11.61□□□□□ -0.55
PCDH15-216ENST00000414367 WIZO95785 1651 aa11.6□□□□□ -0.55
PCDH15-216ENST00000414367 CEP164Q9UPV0 1460 aa11.59□□□□□ -0.55
PCDH15-216ENST00000414367 FANCD2Q9BXW9 1451 aa11.56□□□□□ -0.56
PCDH15-216ENST00000414367 LAMC3Q9Y6N6 1575 aa11.55□□□□□ -0.56
PCDH15-216ENST00000414367 MRC2Q9UBG0 1479 aa11.53□□□□□ -0.56
PCDH15-216ENST00000414367 TRHP20396 242 aaPredicted RBP11.53□□□□□ -0.56
PCDH15-216ENST00000414367 CYB5RLQ6IPT4 315 aa11.49□□□□□ -0.57
PCDH15-216ENST00000414367 CHMP7Q8WUX9 453 aaPredicted RBP11.47□□□□□ -0.57
PCDH15-216ENST00000414367 PEG3Q9GZU2 1588 aa11.46□□□□□ -0.58
PCDH15-216ENST00000414367 CCDC88BA6NC98 1476 aa11.43□□□□□ -0.58
PCDH15-216ENST00000414367 KIF21AQ7Z4S6 1674 aa11.42□□□□□ -0.58
PCDH15-216ENST00000414367 CFTRP13569 1480 aa11.42□□□□□ -0.58
PCDH15-216ENST00000414367 TOP2AP11388 1531 aaKnown RBP11.41□□□□□ -0.58
PCDH15-216ENST00000414367 TTBK1Q5TCY1 1321 aaPredicted RBP11.41□□□□□ -0.58
PCDH15-216ENST00000414367 TDRD9Q8NDG6 1382 aaKnown RBP11.39□□□□□ -0.59
PCDH15-216ENST00000414367 THOC2Q8NI27 1593 aaKnown RBP11.35□□□□□ -0.59
PCDH15-216ENST00000414367 AQRO60306 1485 aaKnown RBP eCLIP11.33□□□□□ -0.6
PCDH15-216ENST00000414367 URB2Q14146 1524 aaKnown RBP11.33□□□□□ -0.6
PCDH15-216ENST00000414367 SOGA1O94964 1423 aa11.32□□□□□ -0.6
PCDH15-216ENST00000414367 WDR62O43379 1518 aa11.29□□□□□ -0.6
PCDH15-216ENST00000414367 ZNF608Q9ULD9 1512 aaPredicted RBP11.29□□□□□ -0.6
PCDH15-216ENST00000414367 IFT140Q96RY7 1462 aa11.28□□□□□ -0.6
PCDH15-216ENST00000414367 TOPBP1Q92547 1522 aa11.26□□□□□ -0.61
PCDH15-216ENST00000414367 RAD54L2Q9Y4B4 1467 aa11.26□□□□□ -0.61
PCDH15-216ENST00000414367 ABCC8Q09428 1581 aa11.25□□□□□ -0.61
PCDH15-216ENST00000414367 NPM1P06748 294 aaKnown RBP eCLIP11.21□□□□□ -0.62
PCDH15-216ENST00000414367 AEBP2Q6ZN18 517 aaPredicted RBP11.2□□□□□ -0.62
PCDH15-216ENST00000414367 POLA1P09884 1462 aaPredicted RBP11.17□□□□□ -0.62
PCDH15-216ENST00000414367 EHMT2Q96KQ7 1210 aa11.17□□□□□ -0.62
PCDH15-216ENST00000414367 FGD5Q6ZNL6 1462 aa11.17□□□□□ -0.62
PCDH15-216ENST00000414367 RANGAP1P46060 587 aaPredicted RBP11.16□□□□□ -0.62
PCDH15-216ENST00000414367 DNMBPQ6XZF7 1577 aa11.14□□□□□ -0.63
PCDH15-216ENST00000414367 WRNQ14191 1432 aaPredicted RBP eCLIP11.13□□□□□ -0.63
PCDH15-216ENST00000414367 SNAPC4Q5SXM2 1469 aa11.12□□□□□ -0.63
PCDH15-216ENST00000414367 FAM9AQ8IZU1 332 aaPredicted RBP11.11□□□□□ -0.63
PCDH15-216ENST00000414367 GAPVD1Q14C86 1478 aa11.1□□□□□ -0.63
PCDH15-216ENST00000414367 GRIN2BQ13224 1484 aa11.09□□□□□ -0.63
PCDH15-216ENST00000414367 ARHGEF11O15085 1522 aa11.07□□□□□ -0.64
PCDH15-216ENST00000414367 EIF4G3O43432 1585 aaKnown RBP11.06□□□□□ -0.64
PCDH15-216ENST00000414367 JPH4Q96JJ6 628 aa11.05□□□□□ -0.64
PCDH15-216ENST00000414367 CUX1P39880 1505 aa11.03□□□□□ -0.64
PCDH15-216ENST00000414367 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.03□□□□□ -0.64
PCDH15-216ENST00000414367 HNRNPUL2Q1KMD3 747 aaKnown RBP11.03□□□□□ -0.64
PCDH15-216ENST00000414367 ARID3CA6NKF2 412 aa11□□□□□ -0.65
PCDH15-216ENST00000414367 CHIC1Q5VXU3 224 aa11□□□□□ -0.65
PCDH15-216ENST00000414367 SYNJ2O15056 1496 aa11□□□□□ -0.65
PCDH15-216ENST00000414367 FAM69CQ0P6D2 419 aa10.99□□□□□ -0.65
PCDH15-216ENST00000414367 RIMBP3CA6NJZ7 1639 aa10.99□□□□□ -0.65
PCDH15-216ENST00000414367 RIMBP3BA6NNM3 1639 aa10.99□□□□□ -0.65
PCDH15-216ENST00000414367 RIMBP3Q9UFD9 1639 aa10.99□□□□□ -0.65
PCDH15-216ENST00000414367 MAGI1Q96QZ7 1491 aaPredicted RBP10.99□□□□□ -0.65
PCDH15-216ENST00000414367 ATP1B4Q9UN42 357 aaPredicted RBP10.98□□□□□ -0.65
PCDH15-216ENST00000414367 SYNJ1O43426 1573 aa10.97□□□□□ -0.65
PCDH15-216ENST00000414367 P3H3Q8IVL6 736 aa10.95□□□□□ -0.66
PCDH15-216ENST00000414367 ARAP1Q96P48 1450 aa10.95□□□□□ -0.66
PCDH15-216ENST00000414367 KIF27Q86VH2 1401 aa10.94□□□□□ -0.66
PCDH15-216ENST00000414367 TARBP1Q13395 1621 aaKnown RBP10.93□□□□□ -0.66
PCDH15-216ENST00000414367 PRDM2Q13029 1718 aa10.93□□□□□ -0.66
PCDH15-216ENST00000414367 FHAD1B1AJZ9 1412 aa10.92□□□□□ -0.66
PCDH15-216ENST00000414367 PRG4Q92954 1404 aaPredicted RBP10.92□□□□□ -0.66
PCDH15-216ENST00000414367 CHD1O14646 1710 aa10.92□□□□□ -0.66
PCDH15-216ENST00000414367 KCNH8Q96L42 1107 aa10.91□□□□□ -0.66
PCDH15-216ENST00000414367 ABCA10Q8WWZ4 1543 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms