RNA–Protein interactions for RNA: ENST00000412446.5

LINC00476-202, long intergenic non-protein coding RNA 476, humanhuman

TSL 1 (best)

Gene LINC00476, Length 809 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-202ENST00000412446 CHIC1Q5VXU3 224 aa21.97■■□□□ 1.11
LINC00476-202ENST00000412446 AEBP2Q6ZN18 517 aaPredicted RBP21.75■■□□□ 1.07
LINC00476-202ENST00000412446 NISCHQ9Y2I1 1504 aa20.48■□□□□ 0.87
LINC00476-202ENST00000412446 DNAJC5BQ9UF47 199 aa19.91■□□□□ 0.78
LINC00476-202ENST00000412446 ABCC9O60706 1549 aa19.81■□□□□ 0.76
LINC00476-202ENST00000412446 PHF23Q9BUL5 403 aaPredicted RBP19.45■□□□□ 0.7
LINC00476-202ENST00000412446 DNAJC5Q9H3Z4 198 aa19.18■□□□□ 0.66
LINC00476-202ENST00000412446 CCDC180Q9P1Z9 1646 aa18.49■□□□□ 0.55
LINC00476-202ENST00000412446 SENP3Q9H4L4 574 aaPredicted RBP18.24■□□□□ 0.51
LINC00476-202ENST00000412446 PABPN1Q86U42 306 aaKnown RBP eCLIP18.23■□□□□ 0.51
LINC00476-202ENST00000412446 RB1CC1Q8TDY2 1594 aa18.22■□□□□ 0.51
LINC00476-202ENST00000412446 PLPPR3Q6T4P5 718 aa18.14■□□□□ 0.49
LINC00476-202ENST00000412446 CECR2Q9BXF3 1484 aa17.98■□□□□ 0.47
LINC00476-202ENST00000412446 UNC13AQ9UPW8 1703 aa17.97■□□□□ 0.47
LINC00476-202ENST00000412446 BICRAQ9NZM4 1560 aa17.89■□□□□ 0.45
LINC00476-202ENST00000412446 CC2D2AQ9P2K1 1620 aa17.86■□□□□ 0.45
LINC00476-202ENST00000412446 NACADO15069 1562 aa17.78■□□□□ 0.44
LINC00476-202ENST00000412446 TRIM41Q8WV44 630 aa17.69■□□□□ 0.42
LINC00476-202ENST00000412446 CUX2O14529 1486 aa17.6■□□□□ 0.41
LINC00476-202ENST00000412446 EIF4G1Q04637 1599 aaKnown RBP17.48■□□□□ 0.39
LINC00476-202ENST00000412446 SHROOM4Q9ULL8 1493 aa17.35■□□□□ 0.37
LINC00476-202ENST00000412446 MYO15BQ96JP2 1530 aa17.31■□□□□ 0.36
LINC00476-202ENST00000412446 DCAF8L2P0C7V8 631 aa17.28■□□□□ 0.36
LINC00476-202ENST00000412446 ERCC6Q03468 1493 aa17.12■□□□□ 0.33
LINC00476-202ENST00000412446 DCAF1Q9Y4B6 1507 aa17.07■□□□□ 0.32
LINC00476-202ENST00000412446 ADRA2BP18089 450 aa17.05■□□□□ 0.32
LINC00476-202ENST00000412446 ZCCHC6Q5VYS8 1495 aaKnown RBP17.02■□□□□ 0.32
LINC00476-202ENST00000412446 FOXD1Q16676 465 aa16.89■□□□□ 0.29
LINC00476-202ENST00000412446 PPP6R1Q9UPN7 881 aa16.89■□□□□ 0.29
LINC00476-202ENST00000412446 THOC2Q8NI27 1593 aaKnown RBP16.81■□□□□ 0.28
LINC00476-202ENST00000412446 SCRIBQ14160 1630 aa16.79■□□□□ 0.28
LINC00476-202ENST00000412446 NESP48681 1621 aa16.69■□□□□ 0.26
LINC00476-202ENST00000412446 KCNA4P22459 653 aa16.67■□□□□ 0.26
LINC00476-202ENST00000412446 ILDR1Q86SU0 546 aaPredicted RBP16.64■□□□□ 0.25
LINC00476-202ENST00000412446 RIMBP3CA6NJZ7 1639 aa16.58■□□□□ 0.24
LINC00476-202ENST00000412446 RIMBP3BA6NNM3 1639 aa16.58■□□□□ 0.24
LINC00476-202ENST00000412446 RIMBP3Q9UFD9 1639 aa16.58■□□□□ 0.24
LINC00476-202ENST00000412446 BAZ1AQ9NRL2 1556 aaPredicted RBP16.57■□□□□ 0.24
LINC00476-202ENST00000412446 OSCARQ8IYS5 282 aa16.51■□□□□ 0.23
LINC00476-202ENST00000412446 SMARCA2P51531 1590 aa16.49■□□□□ 0.23
LINC00476-202ENST00000412446 NCAPD3P42695 1498 aa16.46■□□□□ 0.23
LINC00476-202ENST00000412446 EHMT2Q96KQ7 1210 aa16.45■□□□□ 0.22
LINC00476-202ENST00000412446 TRHP20396 242 aaPredicted RBP16.44■□□□□ 0.22
LINC00476-202ENST00000412446 KIF21AQ7Z4S6 1674 aa16.43■□□□□ 0.22
LINC00476-202ENST00000412446 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
LINC00476-202ENST00000412446 LAMC3Q9Y6N6 1575 aa16.27■□□□□ 0.2
LINC00476-202ENST00000412446 CYB5RLQ6IPT4 315 aa16.25■□□□□ 0.19
LINC00476-202ENST00000412446 ATAD2BQ9ULI0 1458 aa16.22■□□□□ 0.19
LINC00476-202ENST00000412446 WDR62O43379 1518 aa16.22■□□□□ 0.19
LINC00476-202ENST00000412446 HMGXB3Q12766 1538 aa16.2■□□□□ 0.18
LINC00476-202ENST00000412446 PDS5BQ9NTI5 1447 aa16.18■□□□□ 0.18
LINC00476-202ENST00000412446 MRC2Q9UBG0 1479 aa16.17■□□□□ 0.18
LINC00476-202ENST00000412446 PPP4R3CPQ6ZMV5 832 aa16.13■□□□□ 0.17
LINC00476-202ENST00000412446 ARAP1Q96P48 1450 aa16.13■□□□□ 0.17
LINC00476-202ENST00000412446 PIAS4Q8N2W9 510 aaPredicted RBP16.09■□□□□ 0.17
LINC00476-202ENST00000412446 SLC4A1APQ9BWU0 796 aaKnown RBP15.98■□□□□ 0.15
LINC00476-202ENST00000412446 SMARCA4P51532 1647 aa15.97■□□□□ 0.15
LINC00476-202ENST00000412446 BAZ1BQ9UIG0 1483 aaKnown RBP15.93■□□□□ 0.14
LINC00476-202ENST00000412446 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
LINC00476-202ENST00000412446 PEG3Q9GZU2 1588 aa15.91■□□□□ 0.14
LINC00476-202ENST00000412446 NCBP3Q53F19 620 aaKnown RBP15.87■□□□□ 0.13
LINC00476-202ENST00000412446 CADPSQ9ULU8 1353 aa15.86■□□□□ 0.13
LINC00476-202ENST00000412446 CEP164Q9UPV0 1460 aa15.81■□□□□ 0.12
LINC00476-202ENST00000412446 RSF1Q96T23 1441 aaPredicted RBP15.78■□□□□ 0.12
LINC00476-202ENST00000412446 KDM4FA0A1W2PPD8 638 aa15.78■□□□□ 0.12
LINC00476-202ENST00000412446 ZNF608Q9ULD9 1512 aaPredicted RBP15.75■□□□□ 0.11
LINC00476-202ENST00000412446 CHD1O14646 1710 aa15.73■□□□□ 0.11
LINC00476-202ENST00000412446 URB2Q14146 1524 aaKnown RBP15.72■□□□□ 0.11
LINC00476-202ENST00000412446 NPM3O75607 178 aaKnown RBP15.71■□□□□ 0.11
LINC00476-202ENST00000412446 MROH2BQ7Z745 1585 aa15.7■□□□□ 0.1
LINC00476-202ENST00000412446 FANCD2Q9BXW9 1451 aa15.7■□□□□ 0.1
LINC00476-202ENST00000412446 LMTK3Q96Q04 1460 aa15.65■□□□□ 0.1
LINC00476-202ENST00000412446 FBXO41Q8TF61 875 aa15.63■□□□□ 0.09
LINC00476-202ENST00000412446 ERCC6L2Q5T890 1561 aa15.62■□□□□ 0.09
LINC00476-202ENST00000412446 SOCS7O14512 581 aa15.6■□□□□ 0.09
LINC00476-202ENST00000412446 EIF4G3O43432 1585 aaKnown RBP15.57■□□□□ 0.08
LINC00476-202ENST00000412446 IFT140Q96RY7 1462 aa15.55■□□□□ 0.08
LINC00476-202ENST00000412446 ILDR2Q71H61 639 aa15.55■□□□□ 0.08
LINC00476-202ENST00000412446 HECW2Q9P2P5 1572 aa15.54■□□□□ 0.08
LINC00476-202ENST00000412446 CLASP1Q7Z460 1538 aa15.52■□□□□ 0.07
LINC00476-202ENST00000412446 KIF13AQ9H1H9 1805 aa15.51■□□□□ 0.07
LINC00476-202ENST00000412446 WIZO95785 1651 aa15.51■□□□□ 0.07
LINC00476-202ENST00000412446 CNKSR2Q8WXI2 1034 aa15.47■□□□□ 0.07
LINC00476-202ENST00000412446 FBLN2P98095 1184 aa15.44■□□□□ 0.06
LINC00476-202ENST00000412446 TOP2AP11388 1531 aaKnown RBP15.43■□□□□ 0.06
LINC00476-202ENST00000412446 CFTRP13569 1480 aa15.43■□□□□ 0.06
LINC00476-202ENST00000412446 GAPVD1Q14C86 1478 aa15.4■□□□□ 0.06
LINC00476-202ENST00000412446 AQRO60306 1485 aaKnown RBP eCLIP15.4■□□□□ 0.06
LINC00476-202ENST00000412446 ZBTB22O15209 634 aa15.39■□□□□ 0.05
LINC00476-202ENST00000412446 SCAF1Q9H7N4 1312 aaKnown RBP15.37■□□□□ 0.05
LINC00476-202ENST00000412446 SYNJ2O15056 1496 aa15.31■□□□□ 0.04
LINC00476-202ENST00000412446 PRDM2Q13029 1718 aa15.3■□□□□ 0.04
LINC00476-202ENST00000412446 SYNJ1O43426 1573 aa15.29■□□□□ 0.04
LINC00476-202ENST00000412446 TARBP1Q13395 1621 aaKnown RBP15.28■□□□□ 0.04
LINC00476-202ENST00000412446 ADGRL1O94910 1474 aa15.28■□□□□ 0.04
LINC00476-202ENST00000412446 TOPBP1Q92547 1522 aa15.27■□□□□ 0.04
LINC00476-202ENST00000412446 KDM6BO15054 1643 aa15.27■□□□□ 0.03
LINC00476-202ENST00000412446 DISP3Q9P2K9 1392 aa15.24■□□□□ 0.03
LINC00476-202ENST00000412446 MSH5O43196 834 aa15.2■□□□□ 0.02
LINC00476-202ENST00000412446 SNAPC4Q5SXM2 1469 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms