RNA–Protein interactions for RNA: ENST00000412167.6

KIT-202, Transcript of KIT proto-oncogene receptor tyrosine kinase, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene KIT, Length 3,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIT-202ENST00000412167 NISCHQ9Y2I1 1504 aa22.03■■□□□ 1.12
KIT-202ENST00000412167 DCAF8L2P0C7V8 631 aa20■□□□□ 0.79
KIT-202ENST00000412167 SHROOM4Q9ULL8 1493 aa19.47■□□□□ 0.71
KIT-202ENST00000412167 ABCC9O60706 1549 aa18.93■□□□□ 0.62
KIT-202ENST00000412167 SUPT5HO00267 1087 aaKnown RBP18.82■□□□□ 0.6
KIT-202ENST00000412167 CCDC180Q9P1Z9 1646 aa18.55■□□□□ 0.56
KIT-202ENST00000412167 ZCCHC6Q5VYS8 1495 aaKnown RBP18.37■□□□□ 0.53
KIT-202ENST00000412167 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
KIT-202ENST00000412167 SCRIBQ14160 1630 aa18.12■□□□□ 0.49
KIT-202ENST00000412167 EHMT2Q96KQ7 1210 aa17.93■□□□□ 0.46
KIT-202ENST00000412167 FAM9AQ8IZU1 332 aaPredicted RBP17.62■□□□□ 0.41
KIT-202ENST00000412167 CECR2Q9BXF3 1484 aa17.61■□□□□ 0.41
KIT-202ENST00000412167 RB1CC1Q8TDY2 1594 aa17.6■□□□□ 0.41
KIT-202ENST00000412167 NACADO15069 1562 aa17.57■□□□□ 0.4
KIT-202ENST00000412167 DCAF1Q9Y4B6 1507 aa17.54■□□□□ 0.4
KIT-202ENST00000412167 RSF1Q96T23 1441 aaPredicted RBP17.37■□□□□ 0.37
KIT-202ENST00000412167 CHIC1Q5VXU3 224 aa17.37■□□□□ 0.37
KIT-202ENST00000412167 MROH2BQ7Z745 1585 aa17.31■□□□□ 0.36
KIT-202ENST00000412167 LOC105371045A0A1W2PR82 267 aa17.28■□□□□ 0.36
KIT-202ENST00000412167 TRIM41Q8WV44 630 aa17.26■□□□□ 0.35
KIT-202ENST00000412167 MYO15BQ96JP2 1530 aa17.18■□□□□ 0.34
KIT-202ENST00000412167 RANGAP1P46060 587 aaPredicted RBP17.17■□□□□ 0.34
KIT-202ENST00000412167 WIZO95785 1651 aa17.17■□□□□ 0.34
KIT-202ENST00000412167 UNC13AQ9UPW8 1703 aa17.15■□□□□ 0.34
KIT-202ENST00000412167 DNAJC5BQ9UF47 199 aa17.11■□□□□ 0.33
KIT-202ENST00000412167 BICRAQ9NZM4 1560 aa17.08■□□□□ 0.33
KIT-202ENST00000412167 TTBK1Q5TCY1 1321 aaPredicted RBP17.06■□□□□ 0.32
KIT-202ENST00000412167 PPARGC1BQ86YN6 1023 aaKnown RBP17■□□□□ 0.31
KIT-202ENST00000412167 BAZ1AQ9NRL2 1556 aaPredicted RBP16.94■□□□□ 0.3
KIT-202ENST00000412167 SMARCA4P51532 1647 aa16.88■□□□□ 0.29
KIT-202ENST00000412167 CCDC88BA6NC98 1476 aa16.83■□□□□ 0.29
KIT-202ENST00000412167 BAZ1BQ9UIG0 1483 aaKnown RBP16.83■□□□□ 0.28
KIT-202ENST00000412167 ATAD2BQ9ULI0 1458 aa16.78■□□□□ 0.28
KIT-202ENST00000412167 ABCC8Q09428 1581 aa16.77■□□□□ 0.28
KIT-202ENST00000412167 UBTFP17480 764 aaKnown RBP16.73■□□□□ 0.27
KIT-202ENST00000412167 EIF4G1Q04637 1599 aaKnown RBP16.73■□□□□ 0.27
KIT-202ENST00000412167 TOP2AP11388 1531 aaKnown RBP16.61■□□□□ 0.25
KIT-202ENST00000412167 PCGF6Q9BYE7 350 aa16.6■□□□□ 0.25
KIT-202ENST00000412167 CC2D2AQ9P2K1 1620 aa16.58■□□□□ 0.25
KIT-202ENST00000412167 SMARCA2P51531 1590 aa16.58■□□□□ 0.24
KIT-202ENST00000412167 NESP48681 1621 aa16.54■□□□□ 0.24
KIT-202ENST00000412167 SOGA1O94964 1423 aa16.53■□□□□ 0.24
KIT-202ENST00000412167 RUSC2Q8N2Y8 1516 aa16.5■□□□□ 0.23
KIT-202ENST00000412167 ATP1B4Q9UN42 357 aaPredicted RBP16.48■□□□□ 0.23
KIT-202ENST00000412167 WRNQ14191 1432 aaPredicted RBP eCLIP16.44■□□□□ 0.22
KIT-202ENST00000412167 P3H3Q8IVL6 736 aa16.43■□□□□ 0.22
KIT-202ENST00000412167 CSRNP3Q8WYN3 585 aa16.41■□□□□ 0.22
KIT-202ENST00000412167 NCAPD3P42695 1498 aa16.39■□□□□ 0.21
KIT-202ENST00000412167 FBLN2P98095 1184 aa16.38■□□□□ 0.21
KIT-202ENST00000412167 ARID3CA6NKF2 412 aa16.34■□□□□ 0.21
KIT-202ENST00000412167 CADPSQ9ULU8 1353 aa16.31■□□□□ 0.2
KIT-202ENST00000412167 SYNJ1O43426 1573 aa16.23■□□□□ 0.19
KIT-202ENST00000412167 TDRD9Q8NDG6 1382 aaKnown RBP16.23■□□□□ 0.19
KIT-202ENST00000412167 PEG3Q9GZU2 1588 aa16.19■□□□□ 0.18
KIT-202ENST00000412167 FANCD2Q9BXW9 1451 aa16.19■□□□□ 0.18
KIT-202ENST00000412167 RAD54L2Q9Y4B4 1467 aa16.19■□□□□ 0.18
KIT-202ENST00000412167 ERCC6Q03468 1493 aa16.17■□□□□ 0.18
KIT-202ENST00000412167 HMGXB3Q12766 1538 aa16.14■□□□□ 0.18
KIT-202ENST00000412167 ITGAEP38570 1179 aa16.14■□□□□ 0.17
KIT-202ENST00000412167 CUX2O14529 1486 aa16.14■□□□□ 0.17
KIT-202ENST00000412167 CFTRP13569 1480 aa16.13■□□□□ 0.17
KIT-202ENST00000412167 APLP2Q06481 763 aa16.12■□□□□ 0.17
KIT-202ENST00000412167 CUX1P39880 1505 aa16.09■□□□□ 0.17
KIT-202ENST00000412167 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
KIT-202ENST00000412167 RAPGEF2Q9Y4G8 1499 aa16.05■□□□□ 0.16
KIT-202ENST00000412167 FGD5Q6ZNL6 1462 aa16.04■□□□□ 0.16
KIT-202ENST00000412167 CEP164Q9UPV0 1460 aa16.02■□□□□ 0.16
KIT-202ENST00000412167 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.02■□□□□ 0.15
KIT-202ENST00000412167 CEP162Q5TB80 1403 aa16.01■□□□□ 0.15
KIT-202ENST00000412167 PDS5BQ9NTI5 1447 aa16■□□□□ 0.15
KIT-202ENST00000412167 AQRO60306 1485 aaKnown RBP eCLIP15.98■□□□□ 0.15
KIT-202ENST00000412167 KIF27Q86VH2 1401 aa15.97■□□□□ 0.15
KIT-202ENST00000412167 TRIM26Q12899 539 aaPredicted RBP15.94■□□□□ 0.14
KIT-202ENST00000412167 CARMIL1Q5VZK9 1371 aa15.92■□□□□ 0.14
KIT-202ENST00000412167 CHMP7Q8WUX9 453 aaPredicted RBP15.91■□□□□ 0.14
KIT-202ENST00000412167 CLIP1P30622 1438 aa15.91■□□□□ 0.14
KIT-202ENST00000412167 URB2Q14146 1524 aaKnown RBP15.91■□□□□ 0.14
KIT-202ENST00000412167 TOPBP1Q92547 1522 aa15.9■□□□□ 0.14
KIT-202ENST00000412167 POLA1P09884 1462 aaPredicted RBP15.9■□□□□ 0.14
KIT-202ENST00000412167 GOLGA3Q08378 1498 aa15.9■□□□□ 0.14
KIT-202ENST00000412167 IGF1RP08069 1367 aa15.89■□□□□ 0.13
KIT-202ENST00000412167 TOP2BQ02880 1626 aa15.86■□□□□ 0.13
KIT-202ENST00000412167 ZNF608Q9ULD9 1512 aaPredicted RBP15.83■□□□□ 0.12
KIT-202ENST00000412167 KANK4Q5T7N3 995 aaPredicted RBP15.83■□□□□ 0.12
KIT-202ENST00000412167 KIF21AQ7Z4S6 1674 aa15.83■□□□□ 0.12
KIT-202ENST00000412167 TNIKQ9UKE5 1360 aa15.82■□□□□ 0.12
KIT-202ENST00000412167 CCER1Q8TC90 406 aaPredicted RBP15.79■□□□□ 0.12
KIT-202ENST00000412167 FAM50AQ14320 339 aaKnown RBP15.78■□□□□ 0.12
KIT-202ENST00000412167 EEA1Q15075 1411 aa15.75■□□□□ 0.11
KIT-202ENST00000412167 GAPVD1Q14C86 1478 aa15.73■□□□□ 0.11
KIT-202ENST00000412167 LAMC3Q9Y6N6 1575 aa15.73■□□□□ 0.11
KIT-202ENST00000412167 FHOD3Q2V2M9 1422 aa15.73■□□□□ 0.11
KIT-202ENST00000412167 DNMBPQ6XZF7 1577 aa15.69■□□□□ 0.1
KIT-202ENST00000412167 MRC2Q9UBG0 1479 aa15.69■□□□□ 0.1
KIT-202ENST00000412167 BIVM-ERCC5R4GMW8 1640 aa15.65■□□□□ 0.1
KIT-202ENST00000412167 ZNF777Q9ULD5 760 aaPredicted RBP15.63■□□□□ 0.09
KIT-202ENST00000412167 PRXQ9BXM0 1461 aa15.63■□□□□ 0.09
KIT-202ENST00000412167 ARAP1Q96P48 1450 aa15.61■□□□□ 0.09
KIT-202ENST00000412167 CHIC2Q9UKJ5 165 aa15.61■□□□□ 0.09
KIT-202ENST00000412167 HRCP23327 699 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms