RNA–Protein interactions for RNA: ENST00000411494.5

KCNIP1-204, Transcript of potassium voltage-gated channel interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene KCNIP1, Length 684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1-204ENST00000411494 NISCHQ9Y2I1 1504 aa20.9■□□□□ 0.94
KCNIP1-204ENST00000411494 AEBP2Q6ZN18 517 aaPredicted RBP20.46■□□□□ 0.87
KCNIP1-204ENST00000411494 CHIC1Q5VXU3 224 aa19.38■□□□□ 0.69
KCNIP1-204ENST00000411494 CCDC180Q9P1Z9 1646 aa18.27■□□□□ 0.51
KCNIP1-204ENST00000411494 ZCCHC6Q5VYS8 1495 aaKnown RBP17.6■□□□□ 0.41
KCNIP1-204ENST00000411494 DCAF1Q9Y4B6 1507 aa17.37■□□□□ 0.37
KCNIP1-204ENST00000411494 SENP3Q9H4L4 574 aaPredicted RBP17.32■□□□□ 0.36
KCNIP1-204ENST00000411494 PHF23Q9BUL5 403 aaPredicted RBP17.2■□□□□ 0.34
KCNIP1-204ENST00000411494 MYO15BQ96JP2 1530 aa17.14■□□□□ 0.33
KCNIP1-204ENST00000411494 DCAF8L2P0C7V8 631 aa17.02■□□□□ 0.32
KCNIP1-204ENST00000411494 ABCC9O60706 1549 aa16.99■□□□□ 0.31
KCNIP1-204ENST00000411494 NACADO15069 1562 aa16.95■□□□□ 0.3
KCNIP1-204ENST00000411494 SHROOM4Q9ULL8 1493 aa16.95■□□□□ 0.3
KCNIP1-204ENST00000411494 RB1CC1Q8TDY2 1594 aa16.76■□□□□ 0.27
KCNIP1-204ENST00000411494 SCRIBQ14160 1630 aa16.67■□□□□ 0.26
KCNIP1-204ENST00000411494 UNC13AQ9UPW8 1703 aa16.39■□□□□ 0.21
KCNIP1-204ENST00000411494 SUPT5HO00267 1087 aaKnown RBP16.37■□□□□ 0.21
KCNIP1-204ENST00000411494 FOXD1Q16676 465 aa16.24■□□□□ 0.19
KCNIP1-204ENST00000411494 RSF1Q96T23 1441 aaPredicted RBP16.22■□□□□ 0.19
KCNIP1-204ENST00000411494 BICRAQ9NZM4 1560 aa16.21■□□□□ 0.19
KCNIP1-204ENST00000411494 CECR2Q9BXF3 1484 aa16.16■□□□□ 0.18
KCNIP1-204ENST00000411494 BAZ1AQ9NRL2 1556 aaPredicted RBP16.15■□□□□ 0.18
KCNIP1-204ENST00000411494 MROH2BQ7Z745 1585 aa16.11■□□□□ 0.17
KCNIP1-204ENST00000411494 SMARCA4P51532 1647 aa16.05■□□□□ 0.16
KCNIP1-204ENST00000411494 WIZO95785 1651 aa15.99■□□□□ 0.15
KCNIP1-204ENST00000411494 PABPN1Q86U42 306 aaKnown RBP eCLIP15.98■□□□□ 0.15
KCNIP1-204ENST00000411494 PEG3Q9GZU2 1588 aa15.9■□□□□ 0.14
KCNIP1-204ENST00000411494 TOP2AP11388 1531 aaKnown RBP15.89■□□□□ 0.13
KCNIP1-204ENST00000411494 SMARCA2P51531 1590 aa15.79■□□□□ 0.12
KCNIP1-204ENST00000411494 ATAD2BQ9ULI0 1458 aa15.73■□□□□ 0.11
KCNIP1-204ENST00000411494 EIF4G1Q04637 1599 aaKnown RBP15.71■□□□□ 0.11
KCNIP1-204ENST00000411494 CCDC88BA6NC98 1476 aa15.66■□□□□ 0.1
KCNIP1-204ENST00000411494 BAZ1BQ9UIG0 1483 aaKnown RBP15.65■□□□□ 0.1
KCNIP1-204ENST00000411494 HMGXB3Q12766 1538 aa15.63■□□□□ 0.09
KCNIP1-204ENST00000411494 NCAPD3P42695 1498 aa15.61■□□□□ 0.09
KCNIP1-204ENST00000411494 PLPPR3Q6T4P5 718 aa15.49■□□□□ 0.07
KCNIP1-204ENST00000411494 TRIM41Q8WV44 630 aa15.45■□□□□ 0.06
KCNIP1-204ENST00000411494 CC2D2AQ9P2K1 1620 aa15.43■□□□□ 0.06
KCNIP1-204ENST00000411494 ABCC8Q09428 1581 aa15.34■□□□□ 0.05
KCNIP1-204ENST00000411494 PRDM2Q13029 1718 aa15.29■□□□□ 0.04
KCNIP1-204ENST00000411494 CFTRP13569 1480 aa15.28■□□□□ 0.04
KCNIP1-204ENST00000411494 PPP6R1Q9UPN7 881 aa15.28■□□□□ 0.04
KCNIP1-204ENST00000411494 WRNQ14191 1432 aaPredicted RBP eCLIP15.27■□□□□ 0.04
KCNIP1-204ENST00000411494 ADRA2BP18089 450 aa15.27■□□□□ 0.04
KCNIP1-204ENST00000411494 PIAS4Q8N2W9 510 aaPredicted RBP15.21■□□□□ 0.03
KCNIP1-204ENST00000411494 SYNJ1O43426 1573 aa15.2■□□□□ 0.02
KCNIP1-204ENST00000411494 EEA1Q15075 1411 aa15.19■□□□□ 0.02
KCNIP1-204ENST00000411494 BIVM-ERCC5R4GMW8 1640 aa15.19■□□□□ 0.02
KCNIP1-204ENST00000411494 TOP2BQ02880 1626 aa15.18■□□□□ 0.02
KCNIP1-204ENST00000411494 CADPSQ9ULU8 1353 aa15.18■□□□□ 0.02
KCNIP1-204ENST00000411494 LOC105371045A0A1W2PR82 267 aa15.11■□□□□ 0.01
KCNIP1-204ENST00000411494 LAMC3Q9Y6N6 1575 aa15.08■□□□□ 0
KCNIP1-204ENST00000411494 FAM9AQ8IZU1 332 aaPredicted RBP15.08■□□□□ 0
KCNIP1-204ENST00000411494 SOGA1O94964 1423 aa15.07■□□□□ 0
KCNIP1-204ENST00000411494 CUX1P39880 1505 aa15.07■□□□□ 0
KCNIP1-204ENST00000411494 MSH5O43196 834 aa15.06■□□□□ 0
KCNIP1-204ENST00000411494 FANCD2Q9BXW9 1451 aa15.01□□□□□ -0.01
KCNIP1-204ENST00000411494 CSRNP3Q8WYN3 585 aa14.99□□□□□ -0.01
KCNIP1-204ENST00000411494 RUSC2Q8N2Y8 1516 aa14.98□□□□□ -0.01
KCNIP1-204ENST00000411494 KIF21BO75037 1637 aa14.98□□□□□ -0.01
KCNIP1-204ENST00000411494 DNMBPQ6XZF7 1577 aa14.95□□□□□ -0.02
KCNIP1-204ENST00000411494 GOLGA3Q08378 1498 aa14.95□□□□□ -0.02
KCNIP1-204ENST00000411494 NESP48681 1621 aa14.94□□□□□ -0.02
KCNIP1-204ENST00000411494 CEP164Q9UPV0 1460 aa14.94□□□□□ -0.02
KCNIP1-204ENST00000411494 PDS5BQ9NTI5 1447 aa14.92□□□□□ -0.02
KCNIP1-204ENST00000411494 TNIKQ9UKE5 1360 aa14.91□□□□□ -0.02
KCNIP1-204ENST00000411494 KIF27Q86VH2 1401 aa14.9□□□□□ -0.02
KCNIP1-204ENST00000411494 FGD5Q6ZNL6 1462 aa14.89□□□□□ -0.03
KCNIP1-204ENST00000411494 TOPBP1Q92547 1522 aa14.87□□□□□ -0.03
KCNIP1-204ENST00000411494 ERICH3Q5RHP9 1530 aa14.87□□□□□ -0.03
KCNIP1-204ENST00000411494 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
KCNIP1-204ENST00000411494 KIF21AQ7Z4S6 1674 aa14.84□□□□□ -0.03
KCNIP1-204ENST00000411494 PRXQ9BXM0 1461 aa14.82□□□□□ -0.04
KCNIP1-204ENST00000411494 URB2Q14146 1524 aaKnown RBP14.81□□□□□ -0.04
KCNIP1-204ENST00000411494 CEP162Q5TB80 1403 aa14.8□□□□□ -0.04
KCNIP1-204ENST00000411494 POLA1P09884 1462 aaPredicted RBP14.8□□□□□ -0.04
KCNIP1-204ENST00000411494 ABCA10Q8WWZ4 1543 aa14.8□□□□□ -0.04
KCNIP1-204ENST00000411494 CUX2O14529 1486 aa14.79□□□□□ -0.04
KCNIP1-204ENST00000411494 EHMT2Q96KQ7 1210 aa14.78□□□□□ -0.04
KCNIP1-204ENST00000411494 RAPGEF2Q9Y4G8 1499 aa14.77□□□□□ -0.04
KCNIP1-204ENST00000411494 WDR97A6NE52 1622 aa14.77□□□□□ -0.05
KCNIP1-204ENST00000411494 UBTFP17480 764 aaKnown RBP14.76□□□□□ -0.05
KCNIP1-204ENST00000411494 MRC2Q9UBG0 1479 aa14.74□□□□□ -0.05
KCNIP1-204ENST00000411494 POTEDQ86YR6 584 aa14.73□□□□□ -0.05
KCNIP1-204ENST00000411494 IGF1RP08069 1367 aa14.71□□□□□ -0.06
KCNIP1-204ENST00000411494 RAD54L2Q9Y4B4 1467 aa14.7□□□□□ -0.06
KCNIP1-204ENST00000411494 CUL7Q14999 1698 aa14.68□□□□□ -0.06
KCNIP1-204ENST00000411494 ABCA5Q8WWZ7 1642 aa14.68□□□□□ -0.06
KCNIP1-204ENST00000411494 WDR62O43379 1518 aa14.67□□□□□ -0.06
KCNIP1-204ENST00000411494 CLIP1P30622 1438 aa14.66□□□□□ -0.06
KCNIP1-204ENST00000411494 TARBP1Q13395 1621 aaKnown RBP14.66□□□□□ -0.06
KCNIP1-204ENST00000411494 CARMIL1Q5VZK9 1371 aa14.65□□□□□ -0.06
KCNIP1-204ENST00000411494 TRIM26Q12899 539 aaPredicted RBP14.63□□□□□ -0.07
KCNIP1-204ENST00000411494 GAPVD1Q14C86 1478 aa14.6□□□□□ -0.07
KCNIP1-204ENST00000411494 THOC2Q8NI27 1593 aaKnown RBP14.59□□□□□ -0.07
KCNIP1-204ENST00000411494 VPS8Q8N3P4 1428 aa14.58□□□□□ -0.07
KCNIP1-204ENST00000411494 ERCC6Q03468 1493 aa14.58□□□□□ -0.08
KCNIP1-204ENST00000411494 IFT140Q96RY7 1462 aa14.58□□□□□ -0.08
KCNIP1-204ENST00000411494 PCGF6Q9BYE7 350 aa14.56□□□□□ -0.08
KCNIP1-204ENST00000411494 PBRM1Q86U86 1689 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms