RNA–Protein interactions for RNA: ENST00000411185.1

RN7SKP296-201, Transcript of RNA, 7SK small nuclear pseudogene 296, humanhuman

BASIC

Gene RN7SKP296, Length 341 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP296-201ENST00000411185 AEBP2Q6ZN18 517 aaPredicted RBP16.84■□□□□ 0.29
RN7SKP296-201ENST00000411185 CHIC1Q5VXU3 224 aa15.97■□□□□ 0.15
RN7SKP296-201ENST00000411185 NISCHQ9Y2I1 1504 aa15.53■□□□□ 0.08
RN7SKP296-201ENST00000411185 SENP3Q9H4L4 574 aaPredicted RBP14.26□□□□□ -0.13
RN7SKP296-201ENST00000411185 PHF23Q9BUL5 403 aaPredicted RBP14.13□□□□□ -0.15
RN7SKP296-201ENST00000411185 CCDC180Q9P1Z9 1646 aa13.72□□□□□ -0.21
RN7SKP296-201ENST00000411185 FOXD1Q16676 465 aa13.35□□□□□ -0.27
RN7SKP296-201ENST00000411185 ABCC9O60706 1549 aa13.04□□□□□ -0.32
RN7SKP296-201ENST00000411185 ZCCHC6Q5VYS8 1495 aaKnown RBP13□□□□□ -0.33
RN7SKP296-201ENST00000411185 DCAF1Q9Y4B6 1507 aa12.89□□□□□ -0.35
RN7SKP296-201ENST00000411185 DCAF8L2P0C7V8 631 aa12.85□□□□□ -0.35
RN7SKP296-201ENST00000411185 MYO15BQ96JP2 1530 aa12.83□□□□□ -0.36
RN7SKP296-201ENST00000411185 NACADO15069 1562 aa12.81□□□□□ -0.36
RN7SKP296-201ENST00000411185 PLPPR3Q6T4P5 718 aa12.75□□□□□ -0.37
RN7SKP296-201ENST00000411185 RB1CC1Q8TDY2 1594 aa12.75□□□□□ -0.37
RN7SKP296-201ENST00000411185 PPP6R1Q9UPN7 881 aa12.56□□□□□ -0.4
RN7SKP296-201ENST00000411185 ADRA2BP18089 450 aa12.51□□□□□ -0.41
RN7SKP296-201ENST00000411185 SCRIBQ14160 1630 aa12.5□□□□□ -0.41
RN7SKP296-201ENST00000411185 UNC13AQ9UPW8 1703 aa12.46□□□□□ -0.41
RN7SKP296-201ENST00000411185 PIAS4Q8N2W9 510 aaPredicted RBP12.45□□□□□ -0.42
RN7SKP296-201ENST00000411185 SHROOM4Q9ULL8 1493 aa12.42□□□□□ -0.42
RN7SKP296-201ENST00000411185 MSH5O43196 834 aa12.4□□□□□ -0.42
RN7SKP296-201ENST00000411185 BICRAQ9NZM4 1560 aa12.28□□□□□ -0.44
RN7SKP296-201ENST00000411185 PABPN1Q86U42 306 aaKnown RBP eCLIP12.21□□□□□ -0.45
RN7SKP296-201ENST00000411185 POTEDQ86YR6 584 aa12.1□□□□□ -0.47
RN7SKP296-201ENST00000411185 BAZ1AQ9NRL2 1556 aaPredicted RBP12.05□□□□□ -0.48
RN7SKP296-201ENST00000411185 CECR2Q9BXF3 1484 aa12.01□□□□□ -0.49
RN7SKP296-201ENST00000411185 SMARCA4P51532 1647 aa11.99□□□□□ -0.49
RN7SKP296-201ENST00000411185 EIF4G1Q04637 1599 aaKnown RBP11.96□□□□□ -0.49
RN7SKP296-201ENST00000411185 MROH2BQ7Z745 1585 aa11.94□□□□□ -0.5
RN7SKP296-201ENST00000411185 RSF1Q96T23 1441 aaPredicted RBP11.93□□□□□ -0.5
RN7SKP296-201ENST00000411185 SUPT5HO00267 1087 aaKnown RBP11.88□□□□□ -0.51
RN7SKP296-201ENST00000411185 SMARCA2P51531 1590 aa11.88□□□□□ -0.51
RN7SKP296-201ENST00000411185 PEG3Q9GZU2 1588 aa11.88□□□□□ -0.51
RN7SKP296-201ENST00000411185 WIZO95785 1651 aa11.86□□□□□ -0.51
RN7SKP296-201ENST00000411185 CC2D2AQ9P2K1 1620 aa11.83□□□□□ -0.52
RN7SKP296-201ENST00000411185 ATAD2BQ9ULI0 1458 aa11.83□□□□□ -0.52
RN7SKP296-201ENST00000411185 NCAPD3P42695 1498 aa11.77□□□□□ -0.52
RN7SKP296-201ENST00000411185 BAZ1BQ9UIG0 1483 aaKnown RBP11.77□□□□□ -0.52
RN7SKP296-201ENST00000411185 TOP2AP11388 1531 aaKnown RBP11.77□□□□□ -0.52
RN7SKP296-201ENST00000411185 HMGXB3Q12766 1538 aa11.77□□□□□ -0.52
RN7SKP296-201ENST00000411185 DNAJC5BQ9UF47 199 aa11.6□□□□□ -0.55
RN7SKP296-201ENST00000411185 CCDC88BA6NC98 1476 aa11.59□□□□□ -0.55
RN7SKP296-201ENST00000411185 MAPK8IP2Q13387 824 aaPredicted RBP11.49□□□□□ -0.57
RN7SKP296-201ENST00000411185 PRDM2Q13029 1718 aa11.49□□□□□ -0.57
RN7SKP296-201ENST00000411185 LAMC3Q9Y6N6 1575 aa11.45□□□□□ -0.58
RN7SKP296-201ENST00000411185 CADPSQ9ULU8 1353 aa11.45□□□□□ -0.58
RN7SKP296-201ENST00000411185 CFTRP13569 1480 aa11.44□□□□□ -0.58
RN7SKP296-201ENST00000411185 PDS5BQ9NTI5 1447 aa11.36□□□□□ -0.59
RN7SKP296-201ENST00000411185 NESP48681 1621 aa11.35□□□□□ -0.59
RN7SKP296-201ENST00000411185 DMRT2Q9Y5R5 561 aa11.33□□□□□ -0.6
RN7SKP296-201ENST00000411185 SCAF1Q9H7N4 1312 aaKnown RBP11.33□□□□□ -0.6
RN7SKP296-201ENST00000411185 FANCD2Q9BXW9 1451 aa11.32□□□□□ -0.6
RN7SKP296-201ENST00000411185 CEP164Q9UPV0 1460 aa11.3□□□□□ -0.6
RN7SKP296-201ENST00000411185 KIF21AQ7Z4S6 1674 aa11.3□□□□□ -0.6
RN7SKP296-201ENST00000411185 ABCC8Q09428 1581 aa11.27□□□□□ -0.61
RN7SKP296-201ENST00000411185 WRNQ14191 1432 aaPredicted RBP eCLIP11.26□□□□□ -0.61
RN7SKP296-201ENST00000411185 ERCC6Q03468 1493 aa11.26□□□□□ -0.61
RN7SKP296-201ENST00000411185 TRIM41Q8WV44 630 aa11.24□□□□□ -0.61
RN7SKP296-201ENST00000411185 BIVM-ERCC5R4GMW8 1640 aa11.23□□□□□ -0.61
RN7SKP296-201ENST00000411185 TOP2BQ02880 1626 aa11.22□□□□□ -0.61
RN7SKP296-201ENST00000411185 PPP4R3CPQ6ZMV5 832 aa11.22□□□□□ -0.61
RN7SKP296-201ENST00000411185 DNMBPQ6XZF7 1577 aa11.21□□□□□ -0.61
RN7SKP296-201ENST00000411185 MRC2Q9UBG0 1479 aa11.21□□□□□ -0.61
RN7SKP296-201ENST00000411185 SYNJ1O43426 1573 aa11.2□□□□□ -0.62
RN7SKP296-201ENST00000411185 CUX1P39880 1505 aa11.19□□□□□ -0.62
RN7SKP296-201ENST00000411185 TOPBP1Q92547 1522 aa11.18□□□□□ -0.62
RN7SKP296-201ENST00000411185 URB2Q14146 1524 aaKnown RBP11.16□□□□□ -0.62
RN7SKP296-201ENST00000411185 THOC2Q8NI27 1593 aaKnown RBP11.16□□□□□ -0.62
RN7SKP296-201ENST00000411185 WDR62O43379 1518 aa11.15□□□□□ -0.62
RN7SKP296-201ENST00000411185 FGD5Q6ZNL6 1462 aa11.12□□□□□ -0.63
RN7SKP296-201ENST00000411185 POLA1P09884 1462 aaPredicted RBP11.09□□□□□ -0.63
RN7SKP296-201ENST00000411185 SOGA1O94964 1423 aa11.07□□□□□ -0.64
RN7SKP296-201ENST00000411185 EEA1Q15075 1411 aa11.06□□□□□ -0.64
RN7SKP296-201ENST00000411185 IFT140Q96RY7 1462 aa11.06□□□□□ -0.64
RN7SKP296-201ENST00000411185 WDR97A6NE52 1622 aa11.04□□□□□ -0.64
RN7SKP296-201ENST00000411185 ABCA10Q8WWZ4 1543 aa11.04□□□□□ -0.64
RN7SKP296-201ENST00000411185 KIF27Q86VH2 1401 aa11.03□□□□□ -0.64
RN7SKP296-201ENST00000411185 CUX2O14529 1486 aa11.03□□□□□ -0.64
RN7SKP296-201ENST00000411185 TARBP1Q13395 1621 aaKnown RBP11.02□□□□□ -0.64
RN7SKP296-201ENST00000411185 RAD54L2Q9Y4B4 1467 aa11.02□□□□□ -0.65
RN7SKP296-201ENST00000411185 ABCA5Q8WWZ7 1642 aa10.97□□□□□ -0.65
RN7SKP296-201ENST00000411185 FAM9AQ8IZU1 332 aaPredicted RBP10.96□□□□□ -0.65
RN7SKP296-201ENST00000411185 CNKSR2Q8WXI2 1034 aa10.96□□□□□ -0.65
RN7SKP296-201ENST00000411185 PBRM1Q86U86 1689 aa10.95□□□□□ -0.66
RN7SKP296-201ENST00000411185 GAPVD1Q14C86 1478 aa10.95□□□□□ -0.66
RN7SKP296-201ENST00000411185 CSRNP3Q8WYN3 585 aa10.95□□□□□ -0.66
RN7SKP296-201ENST00000411185 RUSC2Q8N2Y8 1516 aa10.94□□□□□ -0.66
RN7SKP296-201ENST00000411185 EIF4G3O43432 1585 aaKnown RBP10.94□□□□□ -0.66
RN7SKP296-201ENST00000411185 ERICH3Q5RHP9 1530 aa10.94□□□□□ -0.66
RN7SKP296-201ENST00000411185 TDRD9Q8NDG6 1382 aaKnown RBP10.93□□□□□ -0.66
RN7SKP296-201ENST00000411185 HOXD11P31277 338 aaPredicted RBP10.93□□□□□ -0.66
RN7SKP296-201ENST00000411185 CUL7Q14999 1698 aa10.92□□□□□ -0.66
RN7SKP296-201ENST00000411185 ZNF608Q9ULD9 1512 aaPredicted RBP10.91□□□□□ -0.66
RN7SKP296-201ENST00000411185 GRIN2BQ13224 1484 aa10.91□□□□□ -0.66
RN7SKP296-201ENST00000411185 AQRO60306 1485 aaKnown RBP eCLIP10.9□□□□□ -0.66
RN7SKP296-201ENST00000411185 KIF21BO75037 1637 aa10.9□□□□□ -0.66
RN7SKP296-201ENST00000411185 IGF1RP08069 1367 aa10.89□□□□□ -0.67
RN7SKP296-201ENST00000411185 DCAF8L1A6NGE4 600 aa10.88□□□□□ -0.67
RN7SKP296-201ENST00000411185 CARMIL1Q5VZK9 1371 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms