RNA–Protein interactions for RNA: ENST00000410519.1

RN7SKP143-201, Transcript of RNA, 7SK small nuclear pseudogene 143, humanhuman

BASIC

Gene RN7SKP143, Length 310 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP143-201ENST00000410519 AEBP2Q6ZN18 517 aaPredicted RBP25.35■■□□□ 1.65
RN7SKP143-201ENST00000410519 NISCHQ9Y2I1 1504 aa24.55■■□□□ 1.52
RN7SKP143-201ENST00000410519 CHIC1Q5VXU3 224 aa23.94■■□□□ 1.42
RN7SKP143-201ENST00000410519 CCDC180Q9P1Z9 1646 aa21.69■■□□□ 1.06
RN7SKP143-201ENST00000410519 SENP3Q9H4L4 574 aaPredicted RBP21.58■■□□□ 1.05
RN7SKP143-201ENST00000410519 PHF23Q9BUL5 403 aaPredicted RBP21.31■■□□□ 1
RN7SKP143-201ENST00000410519 ABCC9O60706 1549 aa20.82■□□□□ 0.92
RN7SKP143-201ENST00000410519 ZCCHC6Q5VYS8 1495 aaKnown RBP20.56■□□□□ 0.88
RN7SKP143-201ENST00000410519 DCAF1Q9Y4B6 1507 aa20.33■□□□□ 0.85
RN7SKP143-201ENST00000410519 DCAF8L2P0C7V8 631 aa20.3■□□□□ 0.84
RN7SKP143-201ENST00000410519 MYO15BQ96JP2 1530 aa20.27■□□□□ 0.84
RN7SKP143-201ENST00000410519 NACADO15069 1562 aa20.27■□□□□ 0.84
RN7SKP143-201ENST00000410519 RB1CC1Q8TDY2 1594 aa20.21■□□□□ 0.83
RN7SKP143-201ENST00000410519 FOXD1Q16676 465 aa20.16■□□□□ 0.82
RN7SKP143-201ENST00000410519 SCRIBQ14160 1630 aa19.82■□□□□ 0.76
RN7SKP143-201ENST00000410519 UNC13AQ9UPW8 1703 aa19.79■□□□□ 0.76
RN7SKP143-201ENST00000410519 SHROOM4Q9ULL8 1493 aa19.62■□□□□ 0.73
RN7SKP143-201ENST00000410519 BICRAQ9NZM4 1560 aa19.59■□□□□ 0.73
RN7SKP143-201ENST00000410519 PABPN1Q86U42 306 aaKnown RBP eCLIP19.49■□□□□ 0.71
RN7SKP143-201ENST00000410519 CECR2Q9BXF3 1484 aa19.08■□□□□ 0.64
RN7SKP143-201ENST00000410519 EIF4G1Q04637 1599 aaKnown RBP19.04■□□□□ 0.64
RN7SKP143-201ENST00000410519 PLPPR3Q6T4P5 718 aa19.04■□□□□ 0.64
RN7SKP143-201ENST00000410519 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.63
RN7SKP143-201ENST00000410519 SMARCA4P51532 1647 aa19■□□□□ 0.63
RN7SKP143-201ENST00000410519 MROH2BQ7Z745 1585 aa18.93■□□□□ 0.62
RN7SKP143-201ENST00000410519 MSH5O43196 834 aa18.87■□□□□ 0.61
RN7SKP143-201ENST00000410519 CC2D2AQ9P2K1 1620 aa18.86■□□□□ 0.61
RN7SKP143-201ENST00000410519 RSF1Q96T23 1441 aaPredicted RBP18.83■□□□□ 0.61
RN7SKP143-201ENST00000410519 PPP6R1Q9UPN7 881 aa18.79■□□□□ 0.6
RN7SKP143-201ENST00000410519 PEG3Q9GZU2 1588 aa18.79■□□□□ 0.6
RN7SKP143-201ENST00000410519 SMARCA2P51531 1590 aa18.77■□□□□ 0.6
RN7SKP143-201ENST00000410519 WIZO95785 1651 aa18.76■□□□□ 0.59
RN7SKP143-201ENST00000410519 PIAS4Q8N2W9 510 aaPredicted RBP18.76■□□□□ 0.59
RN7SKP143-201ENST00000410519 ATAD2BQ9ULI0 1458 aa18.76■□□□□ 0.59
RN7SKP143-201ENST00000410519 DNAJC5BQ9UF47 199 aa18.75■□□□□ 0.59
RN7SKP143-201ENST00000410519 ADRA2BP18089 450 aa18.68■□□□□ 0.58
RN7SKP143-201ENST00000410519 NCAPD3P42695 1498 aa18.68■□□□□ 0.58
RN7SKP143-201ENST00000410519 HMGXB3Q12766 1538 aa18.66■□□□□ 0.58
RN7SKP143-201ENST00000410519 POTEDQ86YR6 584 aa18.64■□□□□ 0.57
RN7SKP143-201ENST00000410519 BAZ1BQ9UIG0 1483 aaKnown RBP18.64■□□□□ 0.57
RN7SKP143-201ENST00000410519 SUPT5HO00267 1087 aaKnown RBP18.63■□□□□ 0.57
RN7SKP143-201ENST00000410519 TOP2AP11388 1531 aaKnown RBP18.59■□□□□ 0.57
RN7SKP143-201ENST00000410519 CCDC88BA6NC98 1476 aa18.34■□□□□ 0.53
RN7SKP143-201ENST00000410519 LAMC3Q9Y6N6 1575 aa18.16■□□□□ 0.5
RN7SKP143-201ENST00000410519 CADPSQ9ULU8 1353 aa18.16■□□□□ 0.5
RN7SKP143-201ENST00000410519 CFTRP13569 1480 aa18.14■□□□□ 0.49
RN7SKP143-201ENST00000410519 NESP48681 1621 aa18.13■□□□□ 0.49
RN7SKP143-201ENST00000410519 PRDM2Q13029 1718 aa18.1■□□□□ 0.49
RN7SKP143-201ENST00000410519 PDS5BQ9NTI5 1447 aa17.99■□□□□ 0.47
RN7SKP143-201ENST00000410519 KIF21AQ7Z4S6 1674 aa17.96■□□□□ 0.47
RN7SKP143-201ENST00000410519 FANCD2Q9BXW9 1451 aa17.96■□□□□ 0.47
RN7SKP143-201ENST00000410519 ERCC6Q03468 1493 aa17.91■□□□□ 0.46
RN7SKP143-201ENST00000410519 CEP164Q9UPV0 1460 aa17.91■□□□□ 0.46
RN7SKP143-201ENST00000410519 ABCC8Q09428 1581 aa17.82■□□□□ 0.44
RN7SKP143-201ENST00000410519 THOC2Q8NI27 1593 aaKnown RBP17.81■□□□□ 0.44
RN7SKP143-201ENST00000410519 MRC2Q9UBG0 1479 aa17.81■□□□□ 0.44
RN7SKP143-201ENST00000410519 URB2Q14146 1524 aaKnown RBP17.77■□□□□ 0.43
RN7SKP143-201ENST00000410519 WRNQ14191 1432 aaPredicted RBP eCLIP17.76■□□□□ 0.43
RN7SKP143-201ENST00000410519 DNMBPQ6XZF7 1577 aa17.75■□□□□ 0.43
RN7SKP143-201ENST00000410519 WDR62O43379 1518 aa17.75■□□□□ 0.43
RN7SKP143-201ENST00000410519 CUX1P39880 1505 aa17.74■□□□□ 0.43
RN7SKP143-201ENST00000410519 SYNJ1O43426 1573 aa17.73■□□□□ 0.43
RN7SKP143-201ENST00000410519 TOPBP1Q92547 1522 aa17.72■□□□□ 0.43
RN7SKP143-201ENST00000410519 BIVM-ERCC5R4GMW8 1640 aa17.71■□□□□ 0.43
RN7SKP143-201ENST00000410519 TOP2BQ02880 1626 aa17.7■□□□□ 0.42
RN7SKP143-201ENST00000410519 FGD5Q6ZNL6 1462 aa17.63■□□□□ 0.41
RN7SKP143-201ENST00000410519 POLA1P09884 1462 aaPredicted RBP17.61■□□□□ 0.41
RN7SKP143-201ENST00000410519 CUX2O14529 1486 aa17.59■□□□□ 0.41
RN7SKP143-201ENST00000410519 TRIM41Q8WV44 630 aa17.57■□□□□ 0.4
RN7SKP143-201ENST00000410519 RAD54L2Q9Y4B4 1467 aa17.52■□□□□ 0.4
RN7SKP143-201ENST00000410519 IFT140Q96RY7 1462 aa17.51■□□□□ 0.39
RN7SKP143-201ENST00000410519 TARBP1Q13395 1621 aaKnown RBP17.51■□□□□ 0.39
RN7SKP143-201ENST00000410519 SOGA1O94964 1423 aa17.51■□□□□ 0.39
RN7SKP143-201ENST00000410519 WDR97A6NE52 1622 aa17.5■□□□□ 0.39
RN7SKP143-201ENST00000410519 ABCA10Q8WWZ4 1543 aa17.47■□□□□ 0.39
RN7SKP143-201ENST00000410519 ZNF608Q9ULD9 1512 aaPredicted RBP17.41■□□□□ 0.38
RN7SKP143-201ENST00000410519 EIF4G3O43432 1585 aaKnown RBP17.39■□□□□ 0.37
RN7SKP143-201ENST00000410519 ABCA5Q8WWZ7 1642 aa17.39■□□□□ 0.37
RN7SKP143-201ENST00000410519 TDRD9Q8NDG6 1382 aaKnown RBP17.36■□□□□ 0.37
RN7SKP143-201ENST00000410519 KIF27Q86VH2 1401 aa17.36■□□□□ 0.37
RN7SKP143-201ENST00000410519 AQRO60306 1485 aaKnown RBP eCLIP17.34■□□□□ 0.37
RN7SKP143-201ENST00000410519 GAPVD1Q14C86 1478 aa17.33■□□□□ 0.37
RN7SKP143-201ENST00000410519 PBRM1Q86U86 1689 aa17.32■□□□□ 0.36
RN7SKP143-201ENST00000410519 RUSC2Q8N2Y8 1516 aa17.32■□□□□ 0.36
RN7SKP143-201ENST00000410519 EEA1Q15075 1411 aa17.29■□□□□ 0.36
RN7SKP143-201ENST00000410519 GRIN2BQ13224 1484 aa17.28■□□□□ 0.36
RN7SKP143-201ENST00000410519 ERICH3Q5RHP9 1530 aa17.26■□□□□ 0.35
RN7SKP143-201ENST00000410519 MAPK8IP2Q13387 824 aaPredicted RBP17.22■□□□□ 0.35
RN7SKP143-201ENST00000410519 SNAPC4Q5SXM2 1469 aa17.22■□□□□ 0.35
RN7SKP143-201ENST00000410519 CUL7Q14999 1698 aa17.21■□□□□ 0.35
RN7SKP143-201ENST00000410519 IGF1RP08069 1367 aa17.21■□□□□ 0.35
RN7SKP143-201ENST00000410519 FAM9AQ8IZU1 332 aaPredicted RBP17.21■□□□□ 0.35
RN7SKP143-201ENST00000410519 ADAMTS12P58397 1594 aa17.2■□□□□ 0.34
RN7SKP143-201ENST00000410519 MAGI1Q96QZ7 1491 aaPredicted RBP17.2■□□□□ 0.34
RN7SKP143-201ENST00000410519 CSRNP3Q8WYN3 585 aa17.17■□□□□ 0.34
RN7SKP143-201ENST00000410519 FHAD1B1AJZ9 1412 aa17.14■□□□□ 0.33
RN7SKP143-201ENST00000410519 DMRT2Q9Y5R5 561 aa17.13■□□□□ 0.33
RN7SKP143-201ENST00000410519 CARMIL1Q5VZK9 1371 aa17.13■□□□□ 0.33
RN7SKP143-201ENST00000410519 SYNJ2O15056 1496 aa17.12■□□□□ 0.33
RN7SKP143-201ENST00000410519 PRXQ9BXM0 1461 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms