RNA–Protein interactions for RNA: ENST00000410443.1

RN7SKP127-201, Transcript of RNA, 7SK small nuclear pseudogene 127, humanhuman

BASIC

Gene RN7SKP127, Length 354 nt, Biotype misc RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP127-201ENST00000410443 AEBP2Q6ZN18 517 aaPredicted RBP19.19■□□□□ 0.66
RN7SKP127-201ENST00000410443 NISCHQ9Y2I1 1504 aa18.66■□□□□ 0.58
RN7SKP127-201ENST00000410443 CHIC1Q5VXU3 224 aa18.11■□□□□ 0.49
RN7SKP127-201ENST00000410443 SENP3Q9H4L4 574 aaPredicted RBP16.59■□□□□ 0.25
RN7SKP127-201ENST00000410443 CCDC180Q9P1Z9 1646 aa16.25■□□□□ 0.19
RN7SKP127-201ENST00000410443 PHF23Q9BUL5 403 aaPredicted RBP16.22■□□□□ 0.19
RN7SKP127-201ENST00000410443 ZCCHC6Q5VYS8 1495 aaKnown RBP15.71■□□□□ 0.1
RN7SKP127-201ENST00000410443 DCAF1Q9Y4B6 1507 aa15.52■□□□□ 0.07
RN7SKP127-201ENST00000410443 FOXD1Q16676 465 aa15.38■□□□□ 0.05
RN7SKP127-201ENST00000410443 MYO15BQ96JP2 1530 aa15.31■□□□□ 0.04
RN7SKP127-201ENST00000410443 DCAF8L2P0C7V8 631 aa15.24■□□□□ 0.03
RN7SKP127-201ENST00000410443 SHROOM4Q9ULL8 1493 aa15.17■□□□□ 0.02
RN7SKP127-201ENST00000410443 NACADO15069 1562 aa15.11■□□□□ 0.01
RN7SKP127-201ENST00000410443 ABCC9O60706 1549 aa15.09■□□□□ 0.01
RN7SKP127-201ENST00000410443 RB1CC1Q8TDY2 1594 aa14.91□□□□□ -0.02
RN7SKP127-201ENST00000410443 SCRIBQ14160 1630 aa14.84□□□□□ -0.03
RN7SKP127-201ENST00000410443 SUPT5HO00267 1087 aaKnown RBP14.71□□□□□ -0.05
RN7SKP127-201ENST00000410443 POTEDQ86YR6 584 aa14.68□□□□□ -0.06
RN7SKP127-201ENST00000410443 MSH5O43196 834 aa14.65□□□□□ -0.06
RN7SKP127-201ENST00000410443 UNC13AQ9UPW8 1703 aa14.52□□□□□ -0.08
RN7SKP127-201ENST00000410443 RSF1Q96T23 1441 aaPredicted RBP14.51□□□□□ -0.09
RN7SKP127-201ENST00000410443 BAZ1AQ9NRL2 1556 aaPredicted RBP14.42□□□□□ -0.1
RN7SKP127-201ENST00000410443 CECR2Q9BXF3 1484 aa14.41□□□□□ -0.1
RN7SKP127-201ENST00000410443 BICRAQ9NZM4 1560 aa14.4□□□□□ -0.1
RN7SKP127-201ENST00000410443 MROH2BQ7Z745 1585 aa14.37□□□□□ -0.11
RN7SKP127-201ENST00000410443 PLPPR3Q6T4P5 718 aa14.33□□□□□ -0.12
RN7SKP127-201ENST00000410443 PIAS4Q8N2W9 510 aaPredicted RBP14.32□□□□□ -0.12
RN7SKP127-201ENST00000410443 SMARCA4P51532 1647 aa14.3□□□□□ -0.12
RN7SKP127-201ENST00000410443 WIZO95785 1651 aa14.24□□□□□ -0.13
RN7SKP127-201ENST00000410443 PABPN1Q86U42 306 aaKnown RBP eCLIP14.24□□□□□ -0.13
RN7SKP127-201ENST00000410443 PEG3Q9GZU2 1588 aa14.17□□□□□ -0.14
RN7SKP127-201ENST00000410443 TOP2AP11388 1531 aaKnown RBP14.17□□□□□ -0.14
RN7SKP127-201ENST00000410443 PPP6R1Q9UPN7 881 aa14.07□□□□□ -0.16
RN7SKP127-201ENST00000410443 SMARCA2P51531 1590 aa14.07□□□□□ -0.16
RN7SKP127-201ENST00000410443 ATAD2BQ9ULI0 1458 aa14.03□□□□□ -0.16
RN7SKP127-201ENST00000410443 ADRA2BP18089 450 aa14.02□□□□□ -0.17
RN7SKP127-201ENST00000410443 CCDC88BA6NC98 1476 aa13.99□□□□□ -0.17
RN7SKP127-201ENST00000410443 EIF4G1Q04637 1599 aaKnown RBP13.96□□□□□ -0.17
RN7SKP127-201ENST00000410443 BAZ1BQ9UIG0 1483 aaKnown RBP13.95□□□□□ -0.18
RN7SKP127-201ENST00000410443 NCAPD3P42695 1498 aa13.93□□□□□ -0.18
RN7SKP127-201ENST00000410443 HMGXB3Q12766 1538 aa13.92□□□□□ -0.18
RN7SKP127-201ENST00000410443 TRIM41Q8WV44 630 aa13.9□□□□□ -0.18
RN7SKP127-201ENST00000410443 CC2D2AQ9P2K1 1620 aa13.7□□□□□ -0.22
RN7SKP127-201ENST00000410443 ABCC8Q09428 1581 aa13.69□□□□□ -0.22
RN7SKP127-201ENST00000410443 WRNQ14191 1432 aaPredicted RBP eCLIP13.67□□□□□ -0.22
RN7SKP127-201ENST00000410443 CFTRP13569 1480 aa13.65□□□□□ -0.22
RN7SKP127-201ENST00000410443 EEA1Q15075 1411 aa13.64□□□□□ -0.23
RN7SKP127-201ENST00000410443 LOC105371045A0A1W2PR82 267 aa13.61□□□□□ -0.23
RN7SKP127-201ENST00000410443 PRDM2Q13029 1718 aa13.57□□□□□ -0.24
RN7SKP127-201ENST00000410443 CADPSQ9ULU8 1353 aa13.56□□□□□ -0.24
RN7SKP127-201ENST00000410443 SYNJ1O43426 1573 aa13.55□□□□□ -0.24
RN7SKP127-201ENST00000410443 TOP2BQ02880 1626 aa13.55□□□□□ -0.24
RN7SKP127-201ENST00000410443 FAM9AQ8IZU1 332 aaPredicted RBP13.54□□□□□ -0.24
RN7SKP127-201ENST00000410443 BIVM-ERCC5R4GMW8 1640 aa13.53□□□□□ -0.24
RN7SKP127-201ENST00000410443 SOGA1O94964 1423 aa13.48□□□□□ -0.25
RN7SKP127-201ENST00000410443 CSRNP3Q8WYN3 585 aa13.47□□□□□ -0.25
RN7SKP127-201ENST00000410443 CUX1P39880 1505 aa13.44□□□□□ -0.26
RN7SKP127-201ENST00000410443 LAMC3Q9Y6N6 1575 aa13.42□□□□□ -0.26
RN7SKP127-201ENST00000410443 RUSC2Q8N2Y8 1516 aa13.39□□□□□ -0.27
RN7SKP127-201ENST00000410443 KIF21BO75037 1637 aa13.39□□□□□ -0.27
RN7SKP127-201ENST00000410443 TNIKQ9UKE5 1360 aa13.39□□□□□ -0.27
RN7SKP127-201ENST00000410443 GOLGA3Q08378 1498 aa13.39□□□□□ -0.27
RN7SKP127-201ENST00000410443 CEP164Q9UPV0 1460 aa13.39□□□□□ -0.27
RN7SKP127-201ENST00000410443 FANCD2Q9BXW9 1451 aa13.38□□□□□ -0.27
RN7SKP127-201ENST00000410443 KIF27Q86VH2 1401 aa13.34□□□□□ -0.27
RN7SKP127-201ENST00000410443 PDS5BQ9NTI5 1447 aa13.32□□□□□ -0.28
RN7SKP127-201ENST00000410443 DNMBPQ6XZF7 1577 aa13.32□□□□□ -0.28
RN7SKP127-201ENST00000410443 ERICH3Q5RHP9 1530 aa13.29□□□□□ -0.28
RN7SKP127-201ENST00000410443 NESP48681 1621 aa13.28□□□□□ -0.28
RN7SKP127-201ENST00000410443 CEP162Q5TB80 1403 aa13.28□□□□□ -0.28
RN7SKP127-201ENST00000410443 UBTFP17480 764 aaKnown RBP13.27□□□□□ -0.29
RN7SKP127-201ENST00000410443 FGD5Q6ZNL6 1462 aa13.27□□□□□ -0.29
RN7SKP127-201ENST00000410443 PRXQ9BXM0 1461 aa13.27□□□□□ -0.29
RN7SKP127-201ENST00000410443 EHMT2Q96KQ7 1210 aa13.26□□□□□ -0.29
RN7SKP127-201ENST00000410443 TOPBP1Q92547 1522 aa13.25□□□□□ -0.29
RN7SKP127-201ENST00000410443 TRIM26Q12899 539 aaPredicted RBP13.23□□□□□ -0.29
RN7SKP127-201ENST00000410443 RAPGEF2Q9Y4G8 1499 aa13.22□□□□□ -0.29
RN7SKP127-201ENST00000410443 ABCA10Q8WWZ4 1543 aa13.21□□□□□ -0.29
RN7SKP127-201ENST00000410443 CUX2O14529 1486 aa13.21□□□□□ -0.3
RN7SKP127-201ENST00000410443 POLA1P09884 1462 aaPredicted RBP13.19□□□□□ -0.3
RN7SKP127-201ENST00000410443 DNAJC5BQ9UF47 199 aa13.19□□□□□ -0.3
RN7SKP127-201ENST00000410443 IGF1RP08069 1367 aa13.18□□□□□ -0.3
RN7SKP127-201ENST00000410443 URB2Q14146 1524 aaKnown RBP13.18□□□□□ -0.3
RN7SKP127-201ENST00000410443 PCGF6Q9BYE7 350 aa13.17□□□□□ -0.3
RN7SKP127-201ENST00000410443 CLIP1P30622 1438 aa13.15□□□□□ -0.3
RN7SKP127-201ENST00000410443 KIF21AQ7Z4S6 1674 aa13.15□□□□□ -0.31
RN7SKP127-201ENST00000410443 WDR97A6NE52 1622 aa13.12□□□□□ -0.31
RN7SKP127-201ENST00000410443 MRC2Q9UBG0 1479 aa13.11□□□□□ -0.31
RN7SKP127-201ENST00000410443 CARMIL1Q5VZK9 1371 aa13.11□□□□□ -0.31
RN7SKP127-201ENST00000410443 RAD54L2Q9Y4B4 1467 aa13.1□□□□□ -0.31
RN7SKP127-201ENST00000410443 CUL7Q14999 1698 aa13.09□□□□□ -0.31
RN7SKP127-201ENST00000410443 VPS8Q8N3P4 1428 aa13.08□□□□□ -0.32
RN7SKP127-201ENST00000410443 DMRT2Q9Y5R5 561 aa13.07□□□□□ -0.32
RN7SKP127-201ENST00000410443 ABCA5Q8WWZ7 1642 aa13.06□□□□□ -0.32
RN7SKP127-201ENST00000410443 WDR62O43379 1518 aa13.04□□□□□ -0.32
RN7SKP127-201ENST00000410443 TARBP1Q13395 1621 aaKnown RBP13.04□□□□□ -0.32
RN7SKP127-201ENST00000410443 SCAF1Q9H7N4 1312 aaKnown RBP13.04□□□□□ -0.32
RN7SKP127-201ENST00000410443 GAPVD1Q14C86 1478 aa13.03□□□□□ -0.32
RN7SKP127-201ENST00000410443 IFT140Q96RY7 1462 aa12.99□□□□□ -0.33
RN7SKP127-201ENST00000410443 ARAP1Q96P48 1450 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms