RNA–Protein interactions for RNA: ENST00000410411.1

RN7SKP139-201, Transcript of RNA, 7SK small nuclear pseudogene 139, humanhuman

BASIC

Gene RN7SKP139, Length 293 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP139-201ENST00000410411 NISCHQ9Y2I1 1504 aa18.07■□□□□ 0.48
RN7SKP139-201ENST00000410411 CCDC180Q9P1Z9 1646 aa15.67■□□□□ 0.1
RN7SKP139-201ENST00000410411 ZCCHC6Q5VYS8 1495 aaKnown RBP15.25■□□□□ 0.03
RN7SKP139-201ENST00000410411 DCAF1Q9Y4B6 1507 aa15.08■□□□□ 0.01
RN7SKP139-201ENST00000410411 SHROOM4Q9ULL8 1493 aa14.8□□□□□ -0.04
RN7SKP139-201ENST00000410411 MYO15BQ96JP2 1530 aa14.78□□□□□ -0.04
RN7SKP139-201ENST00000410411 DCAF8L2P0C7V8 631 aa14.66□□□□□ -0.06
RN7SKP139-201ENST00000410411 SUPT5HO00267 1087 aaKnown RBP14.55□□□□□ -0.08
RN7SKP139-201ENST00000410411 NACADO15069 1562 aa14.49□□□□□ -0.09
RN7SKP139-201ENST00000410411 ABCC9O60706 1549 aa14.34□□□□□ -0.11
RN7SKP139-201ENST00000410411 SCRIBQ14160 1630 aa14.25□□□□□ -0.13
RN7SKP139-201ENST00000410411 RB1CC1Q8TDY2 1594 aa14.24□□□□□ -0.13
RN7SKP139-201ENST00000410411 CHIC1Q5VXU3 224 aa14.23□□□□□ -0.13
RN7SKP139-201ENST00000410411 RSF1Q96T23 1441 aaPredicted RBP14.14□□□□□ -0.15
RN7SKP139-201ENST00000410411 BAZ1AQ9NRL2 1556 aaPredicted RBP13.97□□□□□ -0.17
RN7SKP139-201ENST00000410411 MROH2BQ7Z745 1585 aa13.88□□□□□ -0.19
RN7SKP139-201ENST00000410411 CECR2Q9BXF3 1484 aa13.87□□□□□ -0.19
RN7SKP139-201ENST00000410411 UNC13AQ9UPW8 1703 aa13.85□□□□□ -0.19
RN7SKP139-201ENST00000410411 WIZO95785 1651 aa13.79□□□□□ -0.2
RN7SKP139-201ENST00000410411 SMARCA4P51532 1647 aa13.79□□□□□ -0.2
RN7SKP139-201ENST00000410411 TRIM41Q8WV44 630 aa13.78□□□□□ -0.2
RN7SKP139-201ENST00000410411 TOP2AP11388 1531 aaKnown RBP13.75□□□□□ -0.21
RN7SKP139-201ENST00000410411 PEG3Q9GZU2 1588 aa13.68□□□□□ -0.22
RN7SKP139-201ENST00000410411 BICRAQ9NZM4 1560 aa13.66□□□□□ -0.22
RN7SKP139-201ENST00000410411 EIF4G1Q04637 1599 aaKnown RBP13.61□□□□□ -0.23
RN7SKP139-201ENST00000410411 SMARCA2P51531 1590 aa13.59□□□□□ -0.23
RN7SKP139-201ENST00000410411 LOC105371045A0A1W2PR82 267 aa13.59□□□□□ -0.23
RN7SKP139-201ENST00000410411 CCDC88BA6NC98 1476 aa13.57□□□□□ -0.24
RN7SKP139-201ENST00000410411 TRIM26Q12899 539 aaPredicted RBP13.55□□□□□ -0.24
RN7SKP139-201ENST00000410411 HRCP23327 699 aa13.54□□□□□ -0.24
RN7SKP139-201ENST00000410411 EEA1Q15075 1411 aa13.54□□□□□ -0.24
RN7SKP139-201ENST00000410411 PCGF6Q9BYE7 350 aa13.49□□□□□ -0.25
RN7SKP139-201ENST00000410411 ATAD2BQ9ULI0 1458 aa13.44□□□□□ -0.26
RN7SKP139-201ENST00000410411 PABPN1Q86U42 306 aaKnown RBP eCLIP13.43□□□□□ -0.26
RN7SKP139-201ENST00000410411 BAZ1BQ9UIG0 1483 aaKnown RBP13.42□□□□□ -0.26
RN7SKP139-201ENST00000410411 ZEB1P37275 1124 aaPredicted RBP13.4□□□□□ -0.26
RN7SKP139-201ENST00000410411 AEBP2Q6ZN18 517 aaPredicted RBP13.38□□□□□ -0.27
RN7SKP139-201ENST00000410411 HMGXB3Q12766 1538 aa13.36□□□□□ -0.27
RN7SKP139-201ENST00000410411 FAM9AQ8IZU1 332 aaPredicted RBP13.36□□□□□ -0.27
RN7SKP139-201ENST00000410411 WRNQ14191 1432 aaPredicted RBP eCLIP13.33□□□□□ -0.28
RN7SKP139-201ENST00000410411 NCAPD3P42695 1498 aa13.33□□□□□ -0.28
RN7SKP139-201ENST00000410411 ABCC8Q09428 1581 aa13.32□□□□□ -0.28
RN7SKP139-201ENST00000410411 TNIKQ9UKE5 1360 aa13.31□□□□□ -0.28
RN7SKP139-201ENST00000410411 CSRNP3Q8WYN3 585 aa13.29□□□□□ -0.28
RN7SKP139-201ENST00000410411 GOLGA3Q08378 1498 aa13.24□□□□□ -0.29
RN7SKP139-201ENST00000410411 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
RN7SKP139-201ENST00000410411 KIF21BO75037 1637 aa13.22□□□□□ -0.29
RN7SKP139-201ENST00000410411 TOP2BQ02880 1626 aa13.2□□□□□ -0.3
RN7SKP139-201ENST00000410411 BIVM-ERCC5R4GMW8 1640 aa13.19□□□□□ -0.3
RN7SKP139-201ENST00000410411 SOGA1O94964 1423 aa13.19□□□□□ -0.3
RN7SKP139-201ENST00000410411 CEP162Q5TB80 1403 aa13.17□□□□□ -0.3
RN7SKP139-201ENST00000410411 SYNJ1O43426 1573 aa13.16□□□□□ -0.3
RN7SKP139-201ENST00000410411 PRDM2Q13029 1718 aa13.16□□□□□ -0.3
RN7SKP139-201ENST00000410411 CFTRP13569 1480 aa13.12□□□□□ -0.31
RN7SKP139-201ENST00000410411 UBTFP17480 764 aaKnown RBP13.12□□□□□ -0.31
RN7SKP139-201ENST00000410411 ERICH3Q5RHP9 1530 aa13.08□□□□□ -0.31
RN7SKP139-201ENST00000410411 RUSC2Q8N2Y8 1516 aa13.06□□□□□ -0.32
RN7SKP139-201ENST00000410411 EHMT2Q96KQ7 1210 aa13.02□□□□□ -0.33
RN7SKP139-201ENST00000410411 KIF27Q86VH2 1401 aa13.02□□□□□ -0.33
RN7SKP139-201ENST00000410411 CLIP1P30622 1438 aa13.01□□□□□ -0.33
RN7SKP139-201ENST00000410411 CADPSQ9ULU8 1353 aa12.99□□□□□ -0.33
RN7SKP139-201ENST00000410411 PRXQ9BXM0 1461 aa12.98□□□□□ -0.33
RN7SKP139-201ENST00000410411 VPS8Q8N3P4 1428 aa12.97□□□□□ -0.33
RN7SKP139-201ENST00000410411 APLP2Q06481 763 aa12.97□□□□□ -0.33
RN7SKP139-201ENST00000410411 CUX1P39880 1505 aa12.97□□□□□ -0.33
RN7SKP139-201ENST00000410411 RAPGEF2Q9Y4G8 1499 aa12.93□□□□□ -0.34
RN7SKP139-201ENST00000410411 CC2D2AQ9P2K1 1620 aa12.92□□□□□ -0.34
RN7SKP139-201ENST00000410411 PPARGC1BQ86YN6 1023 aaKnown RBP12.9□□□□□ -0.34
RN7SKP139-201ENST00000410411 CCER1Q8TC90 406 aaPredicted RBP12.88□□□□□ -0.35
RN7SKP139-201ENST00000410411 LAMC3Q9Y6N6 1575 aa12.83□□□□□ -0.36
RN7SKP139-201ENST00000410411 DNMBPQ6XZF7 1577 aa12.81□□□□□ -0.36
RN7SKP139-201ENST00000410411 FANCD2Q9BXW9 1451 aa12.8□□□□□ -0.36
RN7SKP139-201ENST00000410411 MAP3K1Q13233 1512 aa12.8□□□□□ -0.36
RN7SKP139-201ENST00000410411 CLSPNQ9HAW4 1339 aa12.79□□□□□ -0.36
RN7SKP139-201ENST00000410411 IGF1RP08069 1367 aa12.79□□□□□ -0.36
RN7SKP139-201ENST00000410411 CUX2O14529 1486 aa12.78□□□□□ -0.36
RN7SKP139-201ENST00000410411 FGD5Q6ZNL6 1462 aa12.78□□□□□ -0.36
RN7SKP139-201ENST00000410411 CARMIL1Q5VZK9 1371 aa12.76□□□□□ -0.37
RN7SKP139-201ENST00000410411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.75□□□□□ -0.37
RN7SKP139-201ENST00000410411 CUL7Q14999 1698 aa12.75□□□□□ -0.37
RN7SKP139-201ENST00000410411 ABCA10Q8WWZ4 1543 aa12.75□□□□□ -0.37
RN7SKP139-201ENST00000410411 ARAP1Q96P48 1450 aa12.75□□□□□ -0.37
RN7SKP139-201ENST00000410411 PDS5BQ9NTI5 1447 aa12.73□□□□□ -0.37
RN7SKP139-201ENST00000410411 FHAD1B1AJZ9 1412 aa12.72□□□□□ -0.37
RN7SKP139-201ENST00000410411 TOPBP1Q92547 1522 aa12.71□□□□□ -0.38
RN7SKP139-201ENST00000410411 ARHGAP35Q9NRY4 1499 aa12.7□□□□□ -0.38
RN7SKP139-201ENST00000410411 EFCAB5A4FU69 1503 aa12.69□□□□□ -0.38
RN7SKP139-201ENST00000410411 RRBP1Q9P2E9 1410 aaKnown RBP12.67□□□□□ -0.38
RN7SKP139-201ENST00000410411 POLA1P09884 1462 aaPredicted RBP12.66□□□□□ -0.38
RN7SKP139-201ENST00000410411 AQRO60306 1485 aaKnown RBP eCLIP12.64□□□□□ -0.39
RN7SKP139-201ENST00000410411 WDR97A6NE52 1622 aa12.63□□□□□ -0.39
RN7SKP139-201ENST00000410411 CTTNBP2Q8WZ74 1663 aa12.63□□□□□ -0.39
RN7SKP139-201ENST00000410411 TIAM1Q13009 1591 aa12.61□□□□□ -0.39
RN7SKP139-201ENST00000410411 TTBK1Q5TCY1 1321 aaPredicted RBP12.61□□□□□ -0.39
RN7SKP139-201ENST00000410411 HNRNPUL2Q1KMD3 747 aaKnown RBP12.59□□□□□ -0.39
RN7SKP139-201ENST00000410411 FYCO1Q9BQS8 1478 aa12.59□□□□□ -0.39
RN7SKP139-201ENST00000410411 CCNB3Q8WWL7 1395 aa12.58□□□□□ -0.4
RN7SKP139-201ENST00000410411 ZNF316A6NFI3 1004 aaPredicted RBP12.58□□□□□ -0.4
RN7SKP139-201ENST00000410411 FMN1Q68DA7 1419 aa12.58□□□□□ -0.4
RN7SKP139-201ENST00000410411 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms