RNA–Protein interactions for RNA: ENST00000410405.1

RN7SKP225-201, Transcript of RNA, 7SK small nuclear pseudogene 225, humanhuman

BASIC

Gene RN7SKP225, Length 352 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP225-201ENST00000410405 AEBP2Q6ZN18 517 aaPredicted RBP22.09■■□□□ 1.13
RN7SKP225-201ENST00000410405 CHIC1Q5VXU3 224 aa20.67■□□□□ 0.9
RN7SKP225-201ENST00000410405 SENP3Q9H4L4 574 aaPredicted RBP18.89■□□□□ 0.61
RN7SKP225-201ENST00000410405 PHF23Q9BUL5 403 aaPredicted RBP18.57■□□□□ 0.56
RN7SKP225-201ENST00000410405 NISCHQ9Y2I1 1504 aa18.35■□□□□ 0.53
RN7SKP225-201ENST00000410405 FOXD1Q16676 465 aa17.64■□□□□ 0.41
RN7SKP225-201ENST00000410405 ABCC9O60706 1549 aa17.21■□□□□ 0.35
RN7SKP225-201ENST00000410405 POTEDQ86YR6 584 aa16.78■□□□□ 0.28
RN7SKP225-201ENST00000410405 CCDC180Q9P1Z9 1646 aa16.76■□□□□ 0.27
RN7SKP225-201ENST00000410405 DNAJC5BQ9UF47 199 aa16.7■□□□□ 0.26
RN7SKP225-201ENST00000410405 MSH5O43196 834 aa16.63■□□□□ 0.25
RN7SKP225-201ENST00000410405 PIAS4Q8N2W9 510 aaPredicted RBP16.4■□□□□ 0.22
RN7SKP225-201ENST00000410405 PLPPR3Q6T4P5 718 aa16.36■□□□□ 0.21
RN7SKP225-201ENST00000410405 PPP6R1Q9UPN7 881 aa16.23■□□□□ 0.19
RN7SKP225-201ENST00000410405 RB1CC1Q8TDY2 1594 aa16.21■□□□□ 0.18
RN7SKP225-201ENST00000410405 ADRA2BP18089 450 aa16.16■□□□□ 0.18
RN7SKP225-201ENST00000410405 NACADO15069 1562 aa15.99■□□□□ 0.15
RN7SKP225-201ENST00000410405 PABPN1Q86U42 306 aaKnown RBP eCLIP15.9■□□□□ 0.14
RN7SKP225-201ENST00000410405 DNAJC5Q9H3Z4 198 aa15.83■□□□□ 0.12
RN7SKP225-201ENST00000410405 UNC13AQ9UPW8 1703 aa15.81■□□□□ 0.12
RN7SKP225-201ENST00000410405 BICRAQ9NZM4 1560 aa15.77■□□□□ 0.11
RN7SKP225-201ENST00000410405 MYO15BQ96JP2 1530 aa15.64■□□□□ 0.09
RN7SKP225-201ENST00000410405 CECR2Q9BXF3 1484 aa15.61■□□□□ 0.09
RN7SKP225-201ENST00000410405 SHROOM4Q9ULL8 1493 aa15.59■□□□□ 0.09
RN7SKP225-201ENST00000410405 DCAF8L2P0C7V8 631 aa15.57■□□□□ 0.08
RN7SKP225-201ENST00000410405 CC2D2AQ9P2K1 1620 aa15.57■□□□□ 0.08
RN7SKP225-201ENST00000410405 EIF4G1Q04637 1599 aaKnown RBP15.41■□□□□ 0.06
RN7SKP225-201ENST00000410405 DCAF1Q9Y4B6 1507 aa15.2■□□□□ 0.02
RN7SKP225-201ENST00000410405 CUX2O14529 1486 aa15.19■□□□□ 0.02
RN7SKP225-201ENST00000410405 ZCCHC6Q5VYS8 1495 aaKnown RBP15.17■□□□□ 0.02
RN7SKP225-201ENST00000410405 SCRIBQ14160 1630 aa15.11■□□□□ 0.01
RN7SKP225-201ENST00000410405 DMRT2Q9Y5R5 561 aa14.94□□□□□ -0.02
RN7SKP225-201ENST00000410405 MAPK8IP2Q13387 824 aaPredicted RBP14.93□□□□□ -0.02
RN7SKP225-201ENST00000410405 ERCC6Q03468 1493 aa14.92□□□□□ -0.02
RN7SKP225-201ENST00000410405 NCAPD3P42695 1498 aa14.78□□□□□ -0.04
RN7SKP225-201ENST00000410405 SCAF1Q9H7N4 1312 aaKnown RBP14.78□□□□□ -0.04
RN7SKP225-201ENST00000410405 TRIM41Q8WV44 630 aa14.74□□□□□ -0.05
RN7SKP225-201ENST00000410405 THOC2Q8NI27 1593 aaKnown RBP14.66□□□□□ -0.06
RN7SKP225-201ENST00000410405 NESP48681 1621 aa14.63□□□□□ -0.07
RN7SKP225-201ENST00000410405 HMGXB3Q12766 1538 aa14.61□□□□□ -0.07
RN7SKP225-201ENST00000410405 ATAD2BQ9ULI0 1458 aa14.6□□□□□ -0.07
RN7SKP225-201ENST00000410405 SMARCA2P51531 1590 aa14.55□□□□□ -0.08
RN7SKP225-201ENST00000410405 LAMC3Q9Y6N6 1575 aa14.52□□□□□ -0.08
RN7SKP225-201ENST00000410405 CACNB1Q02641 598 aaPredicted RBP14.44□□□□□ -0.1
RN7SKP225-201ENST00000410405 KIF21AQ7Z4S6 1674 aa14.43□□□□□ -0.1
RN7SKP225-201ENST00000410405 PDS5BQ9NTI5 1447 aa14.43□□□□□ -0.1
RN7SKP225-201ENST00000410405 SMARCA4P51532 1647 aa14.42□□□□□ -0.1
RN7SKP225-201ENST00000410405 BAZ1BQ9UIG0 1483 aaKnown RBP14.4□□□□□ -0.1
RN7SKP225-201ENST00000410405 PEG3Q9GZU2 1588 aa14.37□□□□□ -0.11
RN7SKP225-201ENST00000410405 BAZ1AQ9NRL2 1556 aaPredicted RBP14.37□□□□□ -0.11
RN7SKP225-201ENST00000410405 WDR62O43379 1518 aa14.35□□□□□ -0.11
RN7SKP225-201ENST00000410405 OSCARQ8IYS5 282 aa14.34□□□□□ -0.11
RN7SKP225-201ENST00000410405 MRC2Q9UBG0 1479 aa14.33□□□□□ -0.12
RN7SKP225-201ENST00000410405 PPP4R3CPQ6ZMV5 832 aa14.3□□□□□ -0.12
RN7SKP225-201ENST00000410405 DCAF8L1A6NGE4 600 aa14.29□□□□□ -0.12
RN7SKP225-201ENST00000410405 CADPSQ9ULU8 1353 aa14.26□□□□□ -0.13
RN7SKP225-201ENST00000410405 HOXD11P31277 338 aaPredicted RBP14.26□□□□□ -0.13
RN7SKP225-201ENST00000410405 RIMBP3CA6NJZ7 1639 aa14.21□□□□□ -0.13
RN7SKP225-201ENST00000410405 RIMBP3BA6NNM3 1639 aa14.21□□□□□ -0.13
RN7SKP225-201ENST00000410405 RIMBP3Q9UFD9 1639 aa14.21□□□□□ -0.13
RN7SKP225-201ENST00000410405 RNF39Q9H2S5 420 aa14.16□□□□□ -0.14
RN7SKP225-201ENST00000410405 CEP164Q9UPV0 1460 aa14.14□□□□□ -0.15
RN7SKP225-201ENST00000410405 ARHGEF11O15085 1522 aa14.12□□□□□ -0.15
RN7SKP225-201ENST00000410405 CNKSR2Q8WXI2 1034 aa14.11□□□□□ -0.15
RN7SKP225-201ENST00000410405 MROH2BQ7Z745 1585 aa14.09□□□□□ -0.15
RN7SKP225-201ENST00000410405 FANCD2Q9BXW9 1451 aa14.07□□□□□ -0.16
RN7SKP225-201ENST00000410405 RNF216Q9NWF9 866 aaPredicted RBP14.06□□□□□ -0.16
RN7SKP225-201ENST00000410405 URB2Q14146 1524 aaKnown RBP14□□□□□ -0.17
RN7SKP225-201ENST00000410405 CFTRP13569 1480 aa13.99□□□□□ -0.17
RN7SKP225-201ENST00000410405 TRHP20396 242 aaPredicted RBP13.99□□□□□ -0.17
RN7SKP225-201ENST00000410405 CYB5RLQ6IPT4 315 aa13.99□□□□□ -0.17
RN7SKP225-201ENST00000410405 ARAP1Q96P48 1450 aa13.93□□□□□ -0.18
RN7SKP225-201ENST00000410405 C1QBPQ07021 282 aaKnown RBP13.93□□□□□ -0.18
RN7SKP225-201ENST00000410405 RSF1Q96T23 1441 aaPredicted RBP13.91□□□□□ -0.18
RN7SKP225-201ENST00000410405 IFT140Q96RY7 1462 aa13.91□□□□□ -0.18
RN7SKP225-201ENST00000410405 ZNF608Q9ULD9 1512 aaPredicted RBP13.9□□□□□ -0.19
RN7SKP225-201ENST00000410405 WIZO95785 1651 aa13.88□□□□□ -0.19
RN7SKP225-201ENST00000410405 EIF4G3O43432 1585 aaKnown RBP13.81□□□□□ -0.2
RN7SKP225-201ENST00000410405 CHD1O14646 1710 aa13.79□□□□□ -0.2
RN7SKP225-201ENST00000410405 PRDM2Q13029 1718 aa13.77□□□□□ -0.21
RN7SKP225-201ENST00000410405 TOPBP1Q92547 1522 aa13.74□□□□□ -0.21
RN7SKP225-201ENST00000410405 ABCC8Q09428 1581 aa13.74□□□□□ -0.21
RN7SKP225-201ENST00000410405 TOP2AP11388 1531 aaKnown RBP13.7□□□□□ -0.22
RN7SKP225-201ENST00000410405 TARBP1Q13395 1621 aaKnown RBP13.69□□□□□ -0.22
RN7SKP225-201ENST00000410405 CLASP1Q7Z460 1538 aa13.69□□□□□ -0.22
RN7SKP225-201ENST00000410405 AQRO60306 1485 aaKnown RBP eCLIP13.68□□□□□ -0.22
RN7SKP225-201ENST00000410405 DNMBPQ6XZF7 1577 aa13.65□□□□□ -0.22
RN7SKP225-201ENST00000410405 FBLN2P98095 1184 aa13.64□□□□□ -0.23
RN7SKP225-201ENST00000410405 NCBP3Q53F19 620 aaKnown RBP13.64□□□□□ -0.23
RN7SKP225-201ENST00000410405 SUPT5HO00267 1087 aaKnown RBP13.61□□□□□ -0.23
RN7SKP225-201ENST00000410405 SYNJ1O43426 1573 aa13.6□□□□□ -0.23
RN7SKP225-201ENST00000410405 WDR97A6NE52 1622 aa13.57□□□□□ -0.24
RN7SKP225-201ENST00000410405 POLA1P09884 1462 aaPredicted RBP13.57□□□□□ -0.24
RN7SKP225-201ENST00000410405 ILDR1Q86SU0 546 aaPredicted RBP13.55□□□□□ -0.24
RN7SKP225-201ENST00000410405 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.55□□□□□ -0.24
RN7SKP225-201ENST00000410405 CCDC88BA6NC98 1476 aa13.55□□□□□ -0.24
RN7SKP225-201ENST00000410405 GAPVD1Q14C86 1478 aa13.55□□□□□ -0.24
RN7SKP225-201ENST00000410405 SNAPC4Q5SXM2 1469 aa13.54□□□□□ -0.24
RN7SKP225-201ENST00000410405 MAGI1Q96QZ7 1491 aaPredicted RBP13.54□□□□□ -0.24
RN7SKP225-201ENST00000410405 CHMP7Q8WUX9 453 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms