RNA–Protein interactions for RNA: ENST00000409673.7

SCRN3-202, Transcript of secernin 3, humanhuman

TSL 2 BASIC

Gene SCRN3, Length 1,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-202ENST00000409673 NISCHQ9Y2I1 1504 aa21.3■■□□□ 1
SCRN3-202ENST00000409673 AEBP2Q6ZN18 517 aaPredicted RBP19.3■□□□□ 0.68
SCRN3-202ENST00000409673 CCDC180Q9P1Z9 1646 aa18.75■□□□□ 0.59
SCRN3-202ENST00000409673 ABCC9O60706 1549 aa18.62■□□□□ 0.57
SCRN3-202ENST00000409673 SHROOM4Q9ULL8 1493 aa18.17■□□□□ 0.5
SCRN3-202ENST00000409673 ZCCHC6Q5VYS8 1495 aaKnown RBP18.12■□□□□ 0.49
SCRN3-202ENST00000409673 DCAF8L2P0C7V8 631 aa18.12■□□□□ 0.49
SCRN3-202ENST00000409673 CHIC1Q5VXU3 224 aa18.1■□□□□ 0.49
SCRN3-202ENST00000409673 SUPT5HO00267 1087 aaKnown RBP17.91■□□□□ 0.46
SCRN3-202ENST00000409673 MYO15BQ96JP2 1530 aa17.76■□□□□ 0.43
SCRN3-202ENST00000409673 RB1CC1Q8TDY2 1594 aa17.74■□□□□ 0.43
SCRN3-202ENST00000409673 NACADO15069 1562 aa17.7■□□□□ 0.42
SCRN3-202ENST00000409673 HRCP23327 699 aa17.68■□□□□ 0.42
SCRN3-202ENST00000409673 DCAF1Q9Y4B6 1507 aa17.57■□□□□ 0.4
SCRN3-202ENST00000409673 PABPN1Q86U42 306 aaKnown RBP eCLIP17.53■□□□□ 0.4
SCRN3-202ENST00000409673 PELP1Q8IZL8 1130 aaKnown RBP17.52■□□□□ 0.4
SCRN3-202ENST00000409673 PCGF6Q9BYE7 350 aa17.35■□□□□ 0.37
SCRN3-202ENST00000409673 SCRIBQ14160 1630 aa17.31■□□□□ 0.36
SCRN3-202ENST00000409673 UNC13AQ9UPW8 1703 aa17.3■□□□□ 0.36
SCRN3-202ENST00000409673 BICRAQ9NZM4 1560 aa17.24■□□□□ 0.35
SCRN3-202ENST00000409673 DNAJC5BQ9UF47 199 aa17.17■□□□□ 0.34
SCRN3-202ENST00000409673 MYT1Q01538 1121 aa17.16■□□□□ 0.34
SCRN3-202ENST00000409673 PPARGC1BQ86YN6 1023 aaKnown RBP17.15■□□□□ 0.34
SCRN3-202ENST00000409673 LOC105371045A0A1W2PR82 267 aa17.06■□□□□ 0.32
SCRN3-202ENST00000409673 TRIM26Q12899 539 aaPredicted RBP17.05■□□□□ 0.32
SCRN3-202ENST00000409673 RSF1Q96T23 1441 aaPredicted RBP16.92■□□□□ 0.3
SCRN3-202ENST00000409673 ZEB1P37275 1124 aaPredicted RBP16.86■□□□□ 0.29
SCRN3-202ENST00000409673 EIF4G1Q04637 1599 aaKnown RBP16.79■□□□□ 0.28
SCRN3-202ENST00000409673 CC2D2AQ9P2K1 1620 aa16.74■□□□□ 0.27
SCRN3-202ENST00000409673 TRIM41Q8WV44 630 aa16.72■□□□□ 0.27
SCRN3-202ENST00000409673 CECR2Q9BXF3 1484 aa16.68■□□□□ 0.26
SCRN3-202ENST00000409673 SENP3Q9H4L4 574 aaPredicted RBP16.61■□□□□ 0.25
SCRN3-202ENST00000409673 MROH2BQ7Z745 1585 aa16.54■□□□□ 0.24
SCRN3-202ENST00000409673 FAM9AQ8IZU1 332 aaPredicted RBP16.51■□□□□ 0.23
SCRN3-202ENST00000409673 BAZ1AQ9NRL2 1556 aaPredicted RBP16.5■□□□□ 0.23
SCRN3-202ENST00000409673 WIZO95785 1651 aa16.49■□□□□ 0.23
SCRN3-202ENST00000409673 SMARCA4P51532 1647 aa16.48■□□□□ 0.23
SCRN3-202ENST00000409673 SCAF1Q9H7N4 1312 aaKnown RBP16.44■□□□□ 0.22
SCRN3-202ENST00000409673 ATAD2BQ9ULI0 1458 aa16.44■□□□□ 0.22
SCRN3-202ENST00000409673 NCAPD3P42695 1498 aa16.39■□□□□ 0.21
SCRN3-202ENST00000409673 SMARCA2P51531 1590 aa16.35■□□□□ 0.21
SCRN3-202ENST00000409673 TTBK1Q5TCY1 1321 aaPredicted RBP16.33■□□□□ 0.2
SCRN3-202ENST00000409673 WRNQ14191 1432 aaPredicted RBP eCLIP16.32■□□□□ 0.2
SCRN3-202ENST00000409673 BAZ1BQ9UIG0 1483 aaKnown RBP16.32■□□□□ 0.2
SCRN3-202ENST00000409673 PHF23Q9BUL5 403 aaPredicted RBP16.31■□□□□ 0.2
SCRN3-202ENST00000409673 TOP2AP11388 1531 aaKnown RBP16.29■□□□□ 0.2
SCRN3-202ENST00000409673 EHMT2Q96KQ7 1210 aa16.28■□□□□ 0.2
SCRN3-202ENST00000409673 PEG3Q9GZU2 1588 aa16.24■□□□□ 0.19
SCRN3-202ENST00000409673 HMGXB3Q12766 1538 aa16.24■□□□□ 0.19
SCRN3-202ENST00000409673 CCER1Q8TC90 406 aaPredicted RBP16.22■□□□□ 0.19
SCRN3-202ENST00000409673 ACIN1Q9UKV3 1341 aaKnown RBP16.22■□□□□ 0.19
SCRN3-202ENST00000409673 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.21■□□□□ 0.19
SCRN3-202ENST00000409673 ABCC8Q09428 1581 aa16.19■□□□□ 0.18
SCRN3-202ENST00000409673 CEP162Q5TB80 1403 aa16.18■□□□□ 0.18
SCRN3-202ENST00000409673 CCDC88BA6NC98 1476 aa16.17■□□□□ 0.18
SCRN3-202ENST00000409673 EEA1Q15075 1411 aa16.16■□□□□ 0.18
SCRN3-202ENST00000409673 TNIKQ9UKE5 1360 aa16.14■□□□□ 0.17
SCRN3-202ENST00000409673 NESP48681 1621 aa16.12■□□□□ 0.17
SCRN3-202ENST00000409673 NEUROD1Q13562 356 aa16.11■□□□□ 0.17
SCRN3-202ENST00000409673 DIEXFQ68CQ4 756 aaKnown RBP16.1■□□□□ 0.17
SCRN3-202ENST00000409673 CENPBP07199 599 aaPredicted RBP16.08■□□□□ 0.16
SCRN3-202ENST00000409673 SOGA1O94964 1423 aa16.05■□□□□ 0.16
SCRN3-202ENST00000409673 GOLGA3Q08378 1498 aa16.03■□□□□ 0.16
SCRN3-202ENST00000409673 ERCC6Q03468 1493 aa16.02■□□□□ 0.16
SCRN3-202ENST00000409673 CADPSQ9ULU8 1353 aa15.98■□□□□ 0.15
SCRN3-202ENST00000409673 GTF3C3Q9Y5Q9 886 aa15.97■□□□□ 0.15
SCRN3-202ENST00000409673 RUSC2Q8N2Y8 1516 aa15.96■□□□□ 0.15
SCRN3-202ENST00000409673 KIF21BO75037 1637 aa15.96■□□□□ 0.15
SCRN3-202ENST00000409673 CSRNP3Q8WYN3 585 aa15.96■□□□□ 0.15
SCRN3-202ENST00000409673 ZNF316A6NFI3 1004 aaPredicted RBP15.92■□□□□ 0.14
SCRN3-202ENST00000409673 LAMC3Q9Y6N6 1575 aa15.9■□□□□ 0.14
SCRN3-202ENST00000409673 CEP164Q9UPV0 1460 aa15.9■□□□□ 0.14
SCRN3-202ENST00000409673 PDS5BQ9NTI5 1447 aa15.88■□□□□ 0.13
SCRN3-202ENST00000409673 UBTFP17480 764 aaKnown RBP15.85■□□□□ 0.13
SCRN3-202ENST00000409673 SYNJ1O43426 1573 aa15.85■□□□□ 0.13
SCRN3-202ENST00000409673 CFTRP13569 1480 aa15.84■□□□□ 0.13
SCRN3-202ENST00000409673 VPS8Q8N3P4 1428 aa15.82■□□□□ 0.12
SCRN3-202ENST00000409673 CLIP1P30622 1438 aa15.8■□□□□ 0.12
SCRN3-202ENST00000409673 KIF21AQ7Z4S6 1674 aa15.79■□□□□ 0.12
SCRN3-202ENST00000409673 FANCD2Q9BXW9 1451 aa15.79■□□□□ 0.12
SCRN3-202ENST00000409673 CUX2O14529 1486 aa15.72■□□□□ 0.11
SCRN3-202ENST00000409673 THOC2Q8NI27 1593 aaKnown RBP15.71■□□□□ 0.1
SCRN3-202ENST00000409673 MRC2Q9UBG0 1479 aa15.7■□□□□ 0.1
SCRN3-202ENST00000409673 MIER1Q8N108 512 aa15.7■□□□□ 0.1
SCRN3-202ENST00000409673 RAPGEF2Q9Y4G8 1499 aa15.69■□□□□ 0.1
SCRN3-202ENST00000409673 HNRNPUL2Q1KMD3 747 aaKnown RBP15.67■□□□□ 0.1
SCRN3-202ENST00000409673 TOP2BQ02880 1626 aa15.66■□□□□ 0.1
SCRN3-202ENST00000409673 YTHDC1Q96MU7 727 aaKnown RBP15.65■□□□□ 0.1
SCRN3-202ENST00000409673 CLSPNQ9HAW4 1339 aa15.65■□□□□ 0.1
SCRN3-202ENST00000409673 BIVM-ERCC5R4GMW8 1640 aa15.65■□□□□ 0.1
SCRN3-202ENST00000409673 ERICH3Q5RHP9 1530 aa15.64■□□□□ 0.09
SCRN3-202ENST00000409673 URB2Q14146 1524 aaKnown RBP15.63■□□□□ 0.09
SCRN3-202ENST00000409673 WDR62O43379 1518 aa15.6■□□□□ 0.09
SCRN3-202ENST00000409673 APLP2Q06481 763 aa15.59■□□□□ 0.09
SCRN3-202ENST00000409673 ARAP1Q96P48 1450 aa15.57■□□□□ 0.08
SCRN3-202ENST00000409673 DHX57Q6P158 1386 aaKnown RBP15.56■□□□□ 0.08
SCRN3-202ENST00000409673 PRXQ9BXM0 1461 aa15.55■□□□□ 0.08
SCRN3-202ENST00000409673 PRDM2Q13029 1718 aa15.53■□□□□ 0.08
SCRN3-202ENST00000409673 TOPBP1Q92547 1522 aa15.52■□□□□ 0.07
SCRN3-202ENST00000409673 FOXD1Q16676 465 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms