RNA–Protein interactions for RNA: ENST00000409454.5

HMGN2P46-204, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, humanhuman

TSL 2 BASIC

Gene HMGN2P46, Length 1,923 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P46-204ENST00000409454 NISCHQ9Y2I1 1504 aa14.53□□□□□ -0.08
HMGN2P46-204ENST00000409454 POTEDQ86YR6 584 aa13.17□□□□□ -0.3
HMGN2P46-204ENST00000409454 ABCC9O60706 1549 aa12.85□□□□□ -0.35
HMGN2P46-204ENST00000409454 CCDC180Q9P1Z9 1646 aa12.62□□□□□ -0.39
HMGN2P46-204ENST00000409454 CHIC1Q5VXU3 224 aa12.52□□□□□ -0.4
HMGN2P46-204ENST00000409454 AEBP2Q6ZN18 517 aaPredicted RBP12.41□□□□□ -0.42
HMGN2P46-204ENST00000409454 DNAJC5BQ9UF47 199 aa12.31□□□□□ -0.44
HMGN2P46-204ENST00000409454 ZCCHC6Q5VYS8 1495 aaKnown RBP12.28□□□□□ -0.44
HMGN2P46-204ENST00000409454 RB1CC1Q8TDY2 1594 aa12.18□□□□□ -0.46
HMGN2P46-204ENST00000409454 SHROOM4Q9ULL8 1493 aa12.1□□□□□ -0.47
HMGN2P46-204ENST00000409454 DCAF1Q9Y4B6 1507 aa12.03□□□□□ -0.48
HMGN2P46-204ENST00000409454 NACADO15069 1562 aa12.03□□□□□ -0.48
HMGN2P46-204ENST00000409454 DCAF8L2P0C7V8 631 aa11.96□□□□□ -0.5
HMGN2P46-204ENST00000409454 PABPN1Q86U42 306 aaKnown RBP eCLIP11.89□□□□□ -0.51
HMGN2P46-204ENST00000409454 SUPT5HO00267 1087 aaKnown RBP11.85□□□□□ -0.51
HMGN2P46-204ENST00000409454 MYO15BQ96JP2 1530 aa11.8□□□□□ -0.52
HMGN2P46-204ENST00000409454 UNC13AQ9UPW8 1703 aa11.78□□□□□ -0.52
HMGN2P46-204ENST00000409454 BICRAQ9NZM4 1560 aa11.74□□□□□ -0.53
HMGN2P46-204ENST00000409454 DNAJC5Q9H3Z4 198 aa11.67□□□□□ -0.54
HMGN2P46-204ENST00000409454 CECR2Q9BXF3 1484 aa11.66□□□□□ -0.54
HMGN2P46-204ENST00000409454 CC2D2AQ9P2K1 1620 aa11.61□□□□□ -0.55
HMGN2P46-204ENST00000409454 SCRIBQ14160 1630 aa11.55□□□□□ -0.56
HMGN2P46-204ENST00000409454 EIF4G1Q04637 1599 aaKnown RBP11.52□□□□□ -0.56
HMGN2P46-204ENST00000409454 RSF1Q96T23 1441 aaPredicted RBP11.4□□□□□ -0.59
HMGN2P46-204ENST00000409454 CUX2O14529 1486 aa11.33□□□□□ -0.6
HMGN2P46-204ENST00000409454 BAZ1AQ9NRL2 1556 aaPredicted RBP11.23□□□□□ -0.61
HMGN2P46-204ENST00000409454 MROH2BQ7Z745 1585 aa11.2□□□□□ -0.62
HMGN2P46-204ENST00000409454 ERCC6Q03468 1493 aa11.18□□□□□ -0.62
HMGN2P46-204ENST00000409454 TRIM41Q8WV44 630 aa11.16□□□□□ -0.62
HMGN2P46-204ENST00000409454 WIZO95785 1651 aa11.13□□□□□ -0.63
HMGN2P46-204ENST00000409454 NCAPD3P42695 1498 aa11.1□□□□□ -0.63
HMGN2P46-204ENST00000409454 SMARCA4P51532 1647 aa11.09□□□□□ -0.63
HMGN2P46-204ENST00000409454 TOP2AP11388 1531 aaKnown RBP11.07□□□□□ -0.64
HMGN2P46-204ENST00000409454 LOC105371045A0A1W2PR82 267 aa11.04□□□□□ -0.64
HMGN2P46-204ENST00000409454 PHF23Q9BUL5 403 aaPredicted RBP10.99□□□□□ -0.65
HMGN2P46-204ENST00000409454 PCGF6Q9BYE7 350 aa10.99□□□□□ -0.65
HMGN2P46-204ENST00000409454 HMGXB3Q12766 1538 aa10.98□□□□□ -0.65
HMGN2P46-204ENST00000409454 SMARCA2P51531 1590 aa10.97□□□□□ -0.65
HMGN2P46-204ENST00000409454 ATAD2BQ9ULI0 1458 aa10.97□□□□□ -0.65
HMGN2P46-204ENST00000409454 HRCP23327 699 aa10.95□□□□□ -0.66
HMGN2P46-204ENST00000409454 CCDC88BA6NC98 1476 aa10.94□□□□□ -0.66
HMGN2P46-204ENST00000409454 PEG3Q9GZU2 1588 aa10.94□□□□□ -0.66
HMGN2P46-204ENST00000409454 TRIM26Q12899 539 aaPredicted RBP10.93□□□□□ -0.66
HMGN2P46-204ENST00000409454 FAM9AQ8IZU1 332 aaPredicted RBP10.92□□□□□ -0.66
HMGN2P46-204ENST00000409454 THOC2Q8NI27 1593 aaKnown RBP10.92□□□□□ -0.66
HMGN2P46-204ENST00000409454 LAMC3Q9Y6N6 1575 aa10.91□□□□□ -0.66
HMGN2P46-204ENST00000409454 NESP48681 1621 aa10.9□□□□□ -0.66
HMGN2P46-204ENST00000409454 PDS5BQ9NTI5 1447 aa10.87□□□□□ -0.67
HMGN2P46-204ENST00000409454 BAZ1BQ9UIG0 1483 aaKnown RBP10.86□□□□□ -0.67
HMGN2P46-204ENST00000409454 EEA1Q15075 1411 aa10.84□□□□□ -0.67
HMGN2P46-204ENST00000409454 ABCC8Q09428 1581 aa10.81□□□□□ -0.68
HMGN2P46-204ENST00000409454 SENP3Q9H4L4 574 aaPredicted RBP10.8□□□□□ -0.68
HMGN2P46-204ENST00000409454 KIF21AQ7Z4S6 1674 aa10.77□□□□□ -0.68
HMGN2P46-204ENST00000409454 WRNQ14191 1432 aaPredicted RBP eCLIP10.76□□□□□ -0.69
HMGN2P46-204ENST00000409454 MRC2Q9UBG0 1479 aa10.75□□□□□ -0.69
HMGN2P46-204ENST00000409454 ZEB1P37275 1124 aaPredicted RBP10.75□□□□□ -0.69
HMGN2P46-204ENST00000409454 OSCARQ8IYS5 282 aa10.75□□□□□ -0.69
HMGN2P46-204ENST00000409454 EHMT2Q96KQ7 1210 aa10.74□□□□□ -0.69
HMGN2P46-204ENST00000409454 CADPSQ9ULU8 1353 aa10.74□□□□□ -0.69
HMGN2P46-204ENST00000409454 WDR62O43379 1518 aa10.73□□□□□ -0.69
HMGN2P46-204ENST00000409454 CSRNP3Q8WYN3 585 aa10.7□□□□□ -0.7
HMGN2P46-204ENST00000409454 SOGA1O94964 1423 aa10.7□□□□□ -0.7
HMGN2P46-204ENST00000409454 TNIKQ9UKE5 1360 aa10.69□□□□□ -0.7
HMGN2P46-204ENST00000409454 GOLGA3Q08378 1498 aa10.68□□□□□ -0.7
HMGN2P46-204ENST00000409454 CEP162Q5TB80 1403 aa10.66□□□□□ -0.7
HMGN2P46-204ENST00000409454 CEP164Q9UPV0 1460 aa10.65□□□□□ -0.7
HMGN2P46-204ENST00000409454 UBTFP17480 764 aaKnown RBP10.64□□□□□ -0.71
HMGN2P46-204ENST00000409454 SYNJ1O43426 1573 aa10.64□□□□□ -0.71
HMGN2P46-204ENST00000409454 KIF21BO75037 1637 aa10.62□□□□□ -0.71
HMGN2P46-204ENST00000409454 TOP2BQ02880 1626 aa10.61□□□□□ -0.71
HMGN2P46-204ENST00000409454 RUSC2Q8N2Y8 1516 aa10.59□□□□□ -0.71
HMGN2P46-204ENST00000409454 FANCD2Q9BXW9 1451 aa10.58□□□□□ -0.72
HMGN2P46-204ENST00000409454 BIVM-ERCC5R4GMW8 1640 aa10.57□□□□□ -0.72
HMGN2P46-204ENST00000409454 PPARGC1BQ86YN6 1023 aaKnown RBP10.56□□□□□ -0.72
HMGN2P46-204ENST00000409454 RIMBP3CA6NJZ7 1639 aa10.56□□□□□ -0.72
HMGN2P46-204ENST00000409454 RIMBP3BA6NNM3 1639 aa10.56□□□□□ -0.72
HMGN2P46-204ENST00000409454 RIMBP3Q9UFD9 1639 aa10.56□□□□□ -0.72
HMGN2P46-204ENST00000409454 CFTRP13569 1480 aa10.55□□□□□ -0.72
HMGN2P46-204ENST00000409454 CLIP1P30622 1438 aa10.51□□□□□ -0.73
HMGN2P46-204ENST00000409454 ARHGEF11O15085 1522 aa10.51□□□□□ -0.73
HMGN2P46-204ENST00000409454 ERICH3Q5RHP9 1530 aa10.5□□□□□ -0.73
HMGN2P46-204ENST00000409454 APLP2Q06481 763 aa10.49□□□□□ -0.73
HMGN2P46-204ENST00000409454 KIF27Q86VH2 1401 aa10.48□□□□□ -0.73
HMGN2P46-204ENST00000409454 URB2Q14146 1524 aaKnown RBP10.48□□□□□ -0.73
HMGN2P46-204ENST00000409454 PRDM2Q13029 1718 aa10.48□□□□□ -0.73
HMGN2P46-204ENST00000409454 TRHP20396 242 aaPredicted RBP10.47□□□□□ -0.73
HMGN2P46-204ENST00000409454 VPS8Q8N3P4 1428 aa10.47□□□□□ -0.73
HMGN2P46-204ENST00000409454 IFT140Q96RY7 1462 aa10.47□□□□□ -0.73
HMGN2P46-204ENST00000409454 RAPGEF2Q9Y4G8 1499 aa10.47□□□□□ -0.73
HMGN2P46-204ENST00000409454 CCER1Q8TC90 406 aaPredicted RBP10.46□□□□□ -0.73
HMGN2P46-204ENST00000409454 CUX1P39880 1505 aa10.46□□□□□ -0.73
HMGN2P46-204ENST00000409454 CYB5RLQ6IPT4 315 aa10.45□□□□□ -0.74
HMGN2P46-204ENST00000409454 PRXQ9BXM0 1461 aa10.44□□□□□ -0.74
HMGN2P46-204ENST00000409454 MSH5O43196 834 aa10.43□□□□□ -0.74
HMGN2P46-204ENST00000409454 TTBK1Q5TCY1 1321 aaPredicted RBP10.4□□□□□ -0.75
HMGN2P46-204ENST00000409454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.39□□□□□ -0.75
HMGN2P46-204ENST00000409454 ZNF608Q9ULD9 1512 aaPredicted RBP10.38□□□□□ -0.75
HMGN2P46-204ENST00000409454 PLPPR3Q6T4P5 718 aa10.37□□□□□ -0.75
HMGN2P46-204ENST00000409454 ARAP1Q96P48 1450 aa10.36□□□□□ -0.75
HMGN2P46-204ENST00000409454 TOPBP1Q92547 1522 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms