RNA–Protein interactions for RNA: ENST00000409043.5

XIRP2-202, Transcript of xin actin binding repeat containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XIRP2, Length 3,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2-202ENST00000409043 NISCHQ9Y2I1 1504 aa17.44■□□□□ 0.38
XIRP2-202ENST00000409043 CCDC180Q9P1Z9 1646 aa14.92□□□□□ -0.02
XIRP2-202ENST00000409043 ZCCHC6Q5VYS8 1495 aaKnown RBP14.75□□□□□ -0.05
XIRP2-202ENST00000409043 SHROOM4Q9ULL8 1493 aa14.62□□□□□ -0.07
XIRP2-202ENST00000409043 DCAF1Q9Y4B6 1507 aa14.35□□□□□ -0.11
XIRP2-202ENST00000409043 DCAF8L2P0C7V8 631 aa14.28□□□□□ -0.12
XIRP2-202ENST00000409043 SUPT5HO00267 1087 aaKnown RBP14.23□□□□□ -0.13
XIRP2-202ENST00000409043 MYO15BQ96JP2 1530 aa14.01□□□□□ -0.17
XIRP2-202ENST00000409043 SCRIBQ14160 1630 aa13.9□□□□□ -0.19
XIRP2-202ENST00000409043 ABCC9O60706 1549 aa13.88□□□□□ -0.19
XIRP2-202ENST00000409043 CHIC1Q5VXU3 224 aa13.86□□□□□ -0.19
XIRP2-202ENST00000409043 NACADO15069 1562 aa13.8□□□□□ -0.2
XIRP2-202ENST00000409043 RSF1Q96T23 1441 aaPredicted RBP13.74□□□□□ -0.21
XIRP2-202ENST00000409043 PPARGC1BQ86YN6 1023 aaKnown RBP13.65□□□□□ -0.22
XIRP2-202ENST00000409043 CECR2Q9BXF3 1484 aa13.61□□□□□ -0.23
XIRP2-202ENST00000409043 RB1CC1Q8TDY2 1594 aa13.57□□□□□ -0.24
XIRP2-202ENST00000409043 MROH2BQ7Z745 1585 aa13.56□□□□□ -0.24
XIRP2-202ENST00000409043 HRCP23327 699 aa13.47□□□□□ -0.25
XIRP2-202ENST00000409043 WIZO95785 1651 aa13.46□□□□□ -0.25
XIRP2-202ENST00000409043 UNC13AQ9UPW8 1703 aa13.46□□□□□ -0.26
XIRP2-202ENST00000409043 PCGF6Q9BYE7 350 aa13.44□□□□□ -0.26
XIRP2-202ENST00000409043 LOC105371045A0A1W2PR82 267 aa13.42□□□□□ -0.26
XIRP2-202ENST00000409043 BAZ1AQ9NRL2 1556 aaPredicted RBP13.38□□□□□ -0.27
XIRP2-202ENST00000409043 SMARCA4P51532 1647 aa13.32□□□□□ -0.28
XIRP2-202ENST00000409043 EIF4G1Q04637 1599 aaKnown RBP13.31□□□□□ -0.28
XIRP2-202ENST00000409043 BICRAQ9NZM4 1560 aa13.3□□□□□ -0.28
XIRP2-202ENST00000409043 TRIM41Q8WV44 630 aa13.28□□□□□ -0.28
XIRP2-202ENST00000409043 TOP2AP11388 1531 aaKnown RBP13.25□□□□□ -0.29
XIRP2-202ENST00000409043 SMARCA2P51531 1590 aa13.19□□□□□ -0.3
XIRP2-202ENST00000409043 PABPN1Q86U42 306 aaKnown RBP eCLIP13.19□□□□□ -0.3
XIRP2-202ENST00000409043 CCDC88BA6NC98 1476 aa13.19□□□□□ -0.3
XIRP2-202ENST00000409043 FAM9AQ8IZU1 332 aaPredicted RBP13.14□□□□□ -0.31
XIRP2-202ENST00000409043 PEG3Q9GZU2 1588 aa13.12□□□□□ -0.31
XIRP2-202ENST00000409043 ABCC8Q09428 1581 aa13.09□□□□□ -0.31
XIRP2-202ENST00000409043 PELP1Q8IZL8 1130 aaKnown RBP13.08□□□□□ -0.32
XIRP2-202ENST00000409043 SCAF1Q9H7N4 1312 aaKnown RBP13.06□□□□□ -0.32
XIRP2-202ENST00000409043 TRIM26Q12899 539 aaPredicted RBP13□□□□□ -0.33
XIRP2-202ENST00000409043 ATAD2BQ9ULI0 1458 aa13□□□□□ -0.33
XIRP2-202ENST00000409043 EHMT2Q96KQ7 1210 aa12.99□□□□□ -0.33
XIRP2-202ENST00000409043 SOGA1O94964 1423 aa12.93□□□□□ -0.34
XIRP2-202ENST00000409043 BAZ1BQ9UIG0 1483 aaKnown RBP12.91□□□□□ -0.34
XIRP2-202ENST00000409043 RUSC2Q8N2Y8 1516 aa12.9□□□□□ -0.35
XIRP2-202ENST00000409043 SYNJ1O43426 1573 aa12.86□□□□□ -0.35
XIRP2-202ENST00000409043 WRNQ14191 1432 aaPredicted RBP eCLIP12.86□□□□□ -0.35
XIRP2-202ENST00000409043 EEA1Q15075 1411 aa12.8□□□□□ -0.36
XIRP2-202ENST00000409043 NCAPD3P42695 1498 aa12.78□□□□□ -0.36
XIRP2-202ENST00000409043 CSRNP3Q8WYN3 585 aa12.78□□□□□ -0.36
XIRP2-202ENST00000409043 HMGXB3Q12766 1538 aa12.78□□□□□ -0.36
XIRP2-202ENST00000409043 TNIKQ9UKE5 1360 aa12.77□□□□□ -0.36
XIRP2-202ENST00000409043 CEP162Q5TB80 1403 aa12.77□□□□□ -0.37
XIRP2-202ENST00000409043 TOP2BQ02880 1626 aa12.71□□□□□ -0.37
XIRP2-202ENST00000409043 GOLGA3Q08378 1498 aa12.71□□□□□ -0.38
XIRP2-202ENST00000409043 KIF21BO75037 1637 aa12.69□□□□□ -0.38
XIRP2-202ENST00000409043 BIVM-ERCC5R4GMW8 1640 aa12.69□□□□□ -0.38
XIRP2-202ENST00000409043 CEP164Q9UPV0 1460 aa12.66□□□□□ -0.38
XIRP2-202ENST00000409043 NEUROD1Q13562 356 aa12.65□□□□□ -0.38
XIRP2-202ENST00000409043 ZEB1P37275 1124 aaPredicted RBP12.64□□□□□ -0.39
XIRP2-202ENST00000409043 GTF3C3Q9Y5Q9 886 aa12.64□□□□□ -0.39
XIRP2-202ENST00000409043 CFTRP13569 1480 aa12.64□□□□□ -0.39
XIRP2-202ENST00000409043 UBTFP17480 764 aaKnown RBP12.64□□□□□ -0.39
XIRP2-202ENST00000409043 CUX1P39880 1505 aa12.63□□□□□ -0.39
XIRP2-202ENST00000409043 RAPGEF2Q9Y4G8 1499 aa12.63□□□□□ -0.39
XIRP2-202ENST00000409043 PRXQ9BXM0 1461 aa12.55□□□□□ -0.4
XIRP2-202ENST00000409043 CLIP1P30622 1438 aa12.54□□□□□ -0.4
XIRP2-202ENST00000409043 PRDM2Q13029 1718 aa12.54□□□□□ -0.4
XIRP2-202ENST00000409043 YTHDC1Q96MU7 727 aaKnown RBP12.54□□□□□ -0.4
XIRP2-202ENST00000409043 TTBK1Q5TCY1 1321 aaPredicted RBP12.53□□□□□ -0.4
XIRP2-202ENST00000409043 ACIN1Q9UKV3 1341 aaKnown RBP12.53□□□□□ -0.4
XIRP2-202ENST00000409043 CC2D2AQ9P2K1 1620 aa12.53□□□□□ -0.4
XIRP2-202ENST00000409043 ERICH3Q5RHP9 1530 aa12.52□□□□□ -0.41
XIRP2-202ENST00000409043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.51□□□□□ -0.41
XIRP2-202ENST00000409043 MYT1Q01538 1121 aa12.5□□□□□ -0.41
XIRP2-202ENST00000409043 VPS8Q8N3P4 1428 aa12.5□□□□□ -0.41
XIRP2-202ENST00000409043 CADPSQ9ULU8 1353 aa12.49□□□□□ -0.41
XIRP2-202ENST00000409043 KIF27Q86VH2 1401 aa12.46□□□□□ -0.42
XIRP2-202ENST00000409043 ARAP1Q96P48 1450 aa12.43□□□□□ -0.42
XIRP2-202ENST00000409043 CCER1Q8TC90 406 aaPredicted RBP12.43□□□□□ -0.42
XIRP2-202ENST00000409043 RANGAP1P46060 587 aaPredicted RBP12.4□□□□□ -0.43
XIRP2-202ENST00000409043 FGD5Q6ZNL6 1462 aa12.39□□□□□ -0.43
XIRP2-202ENST00000409043 IGF1RP08069 1367 aa12.39□□□□□ -0.43
XIRP2-202ENST00000409043 CUX2O14529 1486 aa12.37□□□□□ -0.43
XIRP2-202ENST00000409043 FANCD2Q9BXW9 1451 aa12.36□□□□□ -0.43
XIRP2-202ENST00000409043 CENPBP07199 599 aaPredicted RBP12.36□□□□□ -0.43
XIRP2-202ENST00000409043 ARHGAP35Q9NRY4 1499 aa12.35□□□□□ -0.43
XIRP2-202ENST00000409043 NESP48681 1621 aa12.35□□□□□ -0.43
XIRP2-202ENST00000409043 KANK4Q5T7N3 995 aaPredicted RBP12.31□□□□□ -0.44
XIRP2-202ENST00000409043 DNMBPQ6XZF7 1577 aa12.3□□□□□ -0.44
XIRP2-202ENST00000409043 DIEXFQ68CQ4 756 aaKnown RBP12.29□□□□□ -0.44
XIRP2-202ENST00000409043 TOPBP1Q92547 1522 aa12.29□□□□□ -0.44
XIRP2-202ENST00000409043 CARMIL1Q5VZK9 1371 aa12.28□□□□□ -0.44
XIRP2-202ENST00000409043 RAD54L2Q9Y4B4 1467 aa12.28□□□□□ -0.44
XIRP2-202ENST00000409043 POLA1P09884 1462 aaPredicted RBP12.28□□□□□ -0.44
XIRP2-202ENST00000409043 DNAJC5BQ9UF47 199 aa12.28□□□□□ -0.44
XIRP2-202ENST00000409043 HNRNPUL2Q1KMD3 747 aaKnown RBP12.28□□□□□ -0.44
XIRP2-202ENST00000409043 ABCA10Q8WWZ4 1543 aa12.27□□□□□ -0.45
XIRP2-202ENST00000409043 APLP2Q06481 763 aa12.26□□□□□ -0.45
XIRP2-202ENST00000409043 LAMC3Q9Y6N6 1575 aa12.24□□□□□ -0.45
XIRP2-202ENST00000409043 URB2Q14146 1524 aaKnown RBP12.24□□□□□ -0.45
XIRP2-202ENST00000409043 RRBP1Q9P2E9 1410 aaKnown RBP12.22□□□□□ -0.45
XIRP2-202ENST00000409043 WDR97A6NE52 1622 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms