RNA–Protein interactions for RNA: ENST00000408945.4

HMSD-201, Transcript of histocompatibility minor serpin domain containing, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HMSD, Length 2,101 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMSD-201ENST00000408945 NISCHQ9Y2I1 1504 aa17.89■□□□□ 0.46
HMSD-201ENST00000408945 AEBP2Q6ZN18 517 aaPredicted RBP16.55■□□□□ 0.24
HMSD-201ENST00000408945 CHIC1Q5VXU3 224 aa15.85■□□□□ 0.13
HMSD-201ENST00000408945 CCDC180Q9P1Z9 1646 aa15.81■□□□□ 0.12
HMSD-201ENST00000408945 PELP1Q8IZL8 1130 aaKnown RBP15.32■□□□□ 0.04
HMSD-201ENST00000408945 MYT1Q01538 1121 aa15.1■□□□□ 0.01
HMSD-201ENST00000408945 ABCC9O60706 1549 aa14.99□□□□□ -0.01
HMSD-201ENST00000408945 ZCCHC6Q5VYS8 1495 aaKnown RBP14.98□□□□□ -0.01
HMSD-201ENST00000408945 DCAF1Q9Y4B6 1507 aa14.91□□□□□ -0.02
HMSD-201ENST00000408945 MYO15BQ96JP2 1530 aa14.86□□□□□ -0.03
HMSD-201ENST00000408945 NACADO15069 1562 aa14.79□□□□□ -0.04
HMSD-201ENST00000408945 DCAF8L2P0C7V8 631 aa14.72□□□□□ -0.05
HMSD-201ENST00000408945 RB1CC1Q8TDY2 1594 aa14.7□□□□□ -0.06
HMSD-201ENST00000408945 TTBK1Q5TCY1 1321 aaPredicted RBP14.5□□□□□ -0.09
HMSD-201ENST00000408945 SCRIBQ14160 1630 aa14.33□□□□□ -0.11
HMSD-201ENST00000408945 UNC13AQ9UPW8 1703 aa14.24□□□□□ -0.13
HMSD-201ENST00000408945 HRCP23327 699 aa14.23□□□□□ -0.13
HMSD-201ENST00000408945 SHROOM4Q9ULL8 1493 aa14.22□□□□□ -0.13
HMSD-201ENST00000408945 BICRAQ9NZM4 1560 aa14.14□□□□□ -0.15
HMSD-201ENST00000408945 PHF23Q9BUL5 403 aaPredicted RBP14.07□□□□□ -0.16
HMSD-201ENST00000408945 PABPN1Q86U42 306 aaKnown RBP eCLIP14.03□□□□□ -0.16
HMSD-201ENST00000408945 PRKCSHP14314 528 aaPredicted RBP13.94□□□□□ -0.18
HMSD-201ENST00000408945 SCAF1Q9H7N4 1312 aaKnown RBP13.9□□□□□ -0.18
HMSD-201ENST00000408945 BAZ1AQ9NRL2 1556 aaPredicted RBP13.88□□□□□ -0.19
HMSD-201ENST00000408945 SENP3Q9H4L4 574 aaPredicted RBP13.82□□□□□ -0.2
HMSD-201ENST00000408945 CECR2Q9BXF3 1484 aa13.81□□□□□ -0.2
HMSD-201ENST00000408945 ERICH6Q7L0X2 663 aa13.8□□□□□ -0.2
HMSD-201ENST00000408945 SMARCA4P51532 1647 aa13.8□□□□□ -0.2
HMSD-201ENST00000408945 EIF4G1Q04637 1599 aaKnown RBP13.77□□□□□ -0.2
HMSD-201ENST00000408945 RSF1Q96T23 1441 aaPredicted RBP13.74□□□□□ -0.21
HMSD-201ENST00000408945 MROH2BQ7Z745 1585 aa13.74□□□□□ -0.21
HMSD-201ENST00000408945 BCL11AQ9H165 835 aa13.72□□□□□ -0.21
HMSD-201ENST00000408945 PEG3Q9GZU2 1588 aa13.71□□□□□ -0.22
HMSD-201ENST00000408945 PPARGC1BQ86YN6 1023 aaKnown RBP13.7□□□□□ -0.22
HMSD-201ENST00000408945 SMARCA2P51531 1590 aa13.7□□□□□ -0.22
HMSD-201ENST00000408945 APLP2Q06481 763 aa13.66□□□□□ -0.22
HMSD-201ENST00000408945 ATAD2BQ9ULI0 1458 aa13.64□□□□□ -0.23
HMSD-201ENST00000408945 NCAPD3P42695 1498 aa13.61□□□□□ -0.23
HMSD-201ENST00000408945 CC2D2AQ9P2K1 1620 aa13.61□□□□□ -0.23
HMSD-201ENST00000408945 SUPT5HO00267 1087 aaKnown RBP13.6□□□□□ -0.23
HMSD-201ENST00000408945 HMGXB3Q12766 1538 aa13.59□□□□□ -0.23
HMSD-201ENST00000408945 WIZO95785 1651 aa13.59□□□□□ -0.23
HMSD-201ENST00000408945 BAZ1BQ9UIG0 1483 aaKnown RBP13.56□□□□□ -0.24
HMSD-201ENST00000408945 TOP2AP11388 1531 aaKnown RBP13.56□□□□□ -0.24
HMSD-201ENST00000408945 FAM9AQ8IZU1 332 aaPredicted RBP13.52□□□□□ -0.24
HMSD-201ENST00000408945 CENPBP07199 599 aaPredicted RBP13.47□□□□□ -0.25
HMSD-201ENST00000408945 SLC24A1O60721 1099 aa13.42□□□□□ -0.26
HMSD-201ENST00000408945 PCGF6Q9BYE7 350 aa13.36□□□□□ -0.27
HMSD-201ENST00000408945 ACIN1Q9UKV3 1341 aaKnown RBP13.35□□□□□ -0.27
HMSD-201ENST00000408945 DNAJC5BQ9UF47 199 aa13.35□□□□□ -0.27
HMSD-201ENST00000408945 CCDC88BA6NC98 1476 aa13.35□□□□□ -0.27
HMSD-201ENST00000408945 GTF3C3Q9Y5Q9 886 aa13.23□□□□□ -0.29
HMSD-201ENST00000408945 CADPSQ9ULU8 1353 aa13.22□□□□□ -0.29
HMSD-201ENST00000408945 CFTRP13569 1480 aa13.22□□□□□ -0.29
HMSD-201ENST00000408945 LAMC3Q9Y6N6 1575 aa13.21□□□□□ -0.3
HMSD-201ENST00000408945 ZEB1P37275 1124 aaPredicted RBP13.21□□□□□ -0.3
HMSD-201ENST00000408945 NEUROD1Q13562 356 aa13.18□□□□□ -0.3
HMSD-201ENST00000408945 PRDM2Q13029 1718 aa13.15□□□□□ -0.3
HMSD-201ENST00000408945 ANP32EQ9BTT0 268 aa13.15□□□□□ -0.3
HMSD-201ENST00000408945 PDS5BQ9NTI5 1447 aa13.12□□□□□ -0.31
HMSD-201ENST00000408945 NESP48681 1621 aa13.05□□□□□ -0.32
HMSD-201ENST00000408945 FANCD2Q9BXW9 1451 aa13.04□□□□□ -0.32
HMSD-201ENST00000408945 CEP164Q9UPV0 1460 aa13.02□□□□□ -0.32
HMSD-201ENST00000408945 FOXD1Q16676 465 aa13.01□□□□□ -0.33
HMSD-201ENST00000408945 ABCC8Q09428 1581 aa13.01□□□□□ -0.33
HMSD-201ENST00000408945 EHMT2Q96KQ7 1210 aa13□□□□□ -0.33
HMSD-201ENST00000408945 DAXXQ9UER7 740 aaPredicted RBP13□□□□□ -0.33
HMSD-201ENST00000408945 WRNQ14191 1432 aaPredicted RBP eCLIP12.98□□□□□ -0.33
HMSD-201ENST00000408945 ERCC6Q03468 1493 aa12.96□□□□□ -0.33
HMSD-201ENST00000408945 CSRNP3Q8WYN3 585 aa12.94□□□□□ -0.34
HMSD-201ENST00000408945 MRC2Q9UBG0 1479 aa12.94□□□□□ -0.34
HMSD-201ENST00000408945 KIF21AQ7Z4S6 1674 aa12.93□□□□□ -0.34
HMSD-201ENST00000408945 DNMBPQ6XZF7 1577 aa12.92□□□□□ -0.34
HMSD-201ENST00000408945 TRIM41Q8WV44 630 aa12.92□□□□□ -0.34
HMSD-201ENST00000408945 TOP2BQ02880 1626 aa12.91□□□□□ -0.34
HMSD-201ENST00000408945 BIVM-ERCC5R4GMW8 1640 aa12.91□□□□□ -0.34
HMSD-201ENST00000408945 CUX1P39880 1505 aa12.88□□□□□ -0.35
HMSD-201ENST00000408945 EIF5BO60841 1220 aaKnown RBP12.88□□□□□ -0.35
HMSD-201ENST00000408945 TOPBP1Q92547 1522 aa12.87□□□□□ -0.35
HMSD-201ENST00000408945 WDR62O43379 1518 aa12.87□□□□□ -0.35
HMSD-201ENST00000408945 SYNJ1O43426 1573 aa12.86□□□□□ -0.35
HMSD-201ENST00000408945 URB2Q14146 1524 aaKnown RBP12.86□□□□□ -0.35
HMSD-201ENST00000408945 THOC2Q8NI27 1593 aaKnown RBP12.84□□□□□ -0.35
HMSD-201ENST00000408945 TRIM26Q12899 539 aaPredicted RBP12.83□□□□□ -0.36
HMSD-201ENST00000408945 FGD5Q6ZNL6 1462 aa12.79□□□□□ -0.36
HMSD-201ENST00000408945 EEA1Q15075 1411 aa12.78□□□□□ -0.36
HMSD-201ENST00000408945 POLA1P09884 1462 aaPredicted RBP12.77□□□□□ -0.36
HMSD-201ENST00000408945 UBE2Q2Q8WVN8 375 aa12.77□□□□□ -0.37
HMSD-201ENST00000408945 IFT140Q96RY7 1462 aa12.76□□□□□ -0.37
HMSD-201ENST00000408945 SOGA1O94964 1423 aa12.76□□□□□ -0.37
HMSD-201ENST00000408945 WDR97A6NE52 1622 aa12.75□□□□□ -0.37
HMSD-201ENST00000408945 CUX2O14529 1486 aa12.75□□□□□ -0.37
HMSD-201ENST00000408945 ABCA10Q8WWZ4 1543 aa12.73□□□□□ -0.37
HMSD-201ENST00000408945 KIF27Q86VH2 1401 aa12.72□□□□□ -0.37
HMSD-201ENST00000408945 PLPPR3Q6T4P5 718 aa12.7□□□□□ -0.38
HMSD-201ENST00000408945 TARBP1Q13395 1621 aaKnown RBP12.7□□□□□ -0.38
HMSD-201ENST00000408945 ANO8Q9HCE9 1232 aaPredicted RBP12.69□□□□□ -0.38
HMSD-201ENST00000408945 RAD54L2Q9Y4B4 1467 aa12.67□□□□□ -0.38
HMSD-201ENST00000408945 ABCA5Q8WWZ7 1642 aa12.63□□□□□ -0.39
HMSD-201ENST00000408945 GAPVD1Q14C86 1478 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms