RNA–Protein interactions for RNA: ENST00000407087.4

TIMD4-203, Transcript of T cell immunoglobulin and mucin domain containing 4, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TIMD4, Length 1,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4-203ENST00000407087 AEBP2Q6ZN18 517 aaPredicted RBP18.62■□□□□ 0.57
TIMD4-203ENST00000407087 CHIC1Q5VXU3 224 aa18.52■□□□□ 0.56
TIMD4-203ENST00000407087 NISCHQ9Y2I1 1504 aa17.57■□□□□ 0.4
TIMD4-203ENST00000407087 PHF23Q9BUL5 403 aaPredicted RBP16.35■□□□□ 0.21
TIMD4-203ENST00000407087 CCDC180Q9P1Z9 1646 aa15.76■□□□□ 0.11
TIMD4-203ENST00000407087 SENP3Q9H4L4 574 aaPredicted RBP15.71■□□□□ 0.11
TIMD4-203ENST00000407087 ABCC9O60706 1549 aa15.33■□□□□ 0.04
TIMD4-203ENST00000407087 PLPPR3Q6T4P5 718 aa15.21■□□□□ 0.03
TIMD4-203ENST00000407087 DNAJC5BQ9UF47 199 aa14.87□□□□□ -0.03
TIMD4-203ENST00000407087 RB1CC1Q8TDY2 1594 aa14.78□□□□□ -0.04
TIMD4-203ENST00000407087 NACADO15069 1562 aa14.76□□□□□ -0.05
TIMD4-203ENST00000407087 MYO15BQ96JP2 1530 aa14.7□□□□□ -0.06
TIMD4-203ENST00000407087 ZCCHC6Q5VYS8 1495 aaKnown RBP14.65□□□□□ -0.06
TIMD4-203ENST00000407087 DCAF1Q9Y4B6 1507 aa14.6□□□□□ -0.07
TIMD4-203ENST00000407087 UNC13AQ9UPW8 1703 aa14.58□□□□□ -0.07
TIMD4-203ENST00000407087 FOXD1Q16676 465 aa14.56□□□□□ -0.08
TIMD4-203ENST00000407087 DCAF8L2P0C7V8 631 aa14.44□□□□□ -0.1
TIMD4-203ENST00000407087 BICRAQ9NZM4 1560 aa14.4□□□□□ -0.1
TIMD4-203ENST00000407087 ADRA2BP18089 450 aa14.35□□□□□ -0.11
TIMD4-203ENST00000407087 PPP6R1Q9UPN7 881 aa14.32□□□□□ -0.12
TIMD4-203ENST00000407087 SCRIBQ14160 1630 aa14.26□□□□□ -0.13
TIMD4-203ENST00000407087 SHROOM4Q9ULL8 1493 aa14.25□□□□□ -0.13
TIMD4-203ENST00000407087 PABPN1Q86U42 306 aaKnown RBP eCLIP14.22□□□□□ -0.13
TIMD4-203ENST00000407087 EIF4G1Q04637 1599 aaKnown RBP13.98□□□□□ -0.17
TIMD4-203ENST00000407087 CC2D2AQ9P2K1 1620 aa13.93□□□□□ -0.18
TIMD4-203ENST00000407087 DNAJC5Q9H3Z4 198 aa13.91□□□□□ -0.18
TIMD4-203ENST00000407087 PIAS4Q8N2W9 510 aaPredicted RBP13.84□□□□□ -0.19
TIMD4-203ENST00000407087 CECR2Q9BXF3 1484 aa13.8□□□□□ -0.2
TIMD4-203ENST00000407087 SMARCA4P51532 1647 aa13.69□□□□□ -0.22
TIMD4-203ENST00000407087 BAZ1AQ9NRL2 1556 aaPredicted RBP13.62□□□□□ -0.23
TIMD4-203ENST00000407087 PEG3Q9GZU2 1588 aa13.61□□□□□ -0.23
TIMD4-203ENST00000407087 KCNA4P22459 653 aa13.6□□□□□ -0.23
TIMD4-203ENST00000407087 NCAPD3P42695 1498 aa13.6□□□□□ -0.23
TIMD4-203ENST00000407087 SMARCA2P51531 1590 aa13.58□□□□□ -0.23
TIMD4-203ENST00000407087 ATAD2BQ9ULI0 1458 aa13.58□□□□□ -0.24
TIMD4-203ENST00000407087 HMGXB3Q12766 1538 aa13.58□□□□□ -0.24
TIMD4-203ENST00000407087 MROH2BQ7Z745 1585 aa13.54□□□□□ -0.24
TIMD4-203ENST00000407087 PPP4R3CPQ6ZMV5 832 aa13.47□□□□□ -0.25
TIMD4-203ENST00000407087 BAZ1BQ9UIG0 1483 aaKnown RBP13.44□□□□□ -0.26
TIMD4-203ENST00000407087 WIZO95785 1651 aa13.4□□□□□ -0.26
TIMD4-203ENST00000407087 RSF1Q96T23 1441 aaPredicted RBP13.32□□□□□ -0.28
TIMD4-203ENST00000407087 LAMC3Q9Y6N6 1575 aa13.28□□□□□ -0.28
TIMD4-203ENST00000407087 NESP48681 1621 aa13.28□□□□□ -0.28
TIMD4-203ENST00000407087 TOP2AP11388 1531 aaKnown RBP13.26□□□□□ -0.29
TIMD4-203ENST00000407087 MSH5O43196 834 aa13.25□□□□□ -0.29
TIMD4-203ENST00000407087 CUX2O14529 1486 aa13.23□□□□□ -0.29
TIMD4-203ENST00000407087 NCBP3Q53F19 620 aaKnown RBP13.21□□□□□ -0.29
TIMD4-203ENST00000407087 TRIM41Q8WV44 630 aa13.21□□□□□ -0.29
TIMD4-203ENST00000407087 KIF21AQ7Z4S6 1674 aa13.21□□□□□ -0.3
TIMD4-203ENST00000407087 THOC2Q8NI27 1593 aaKnown RBP13.2□□□□□ -0.3
TIMD4-203ENST00000407087 POTEDQ86YR6 584 aa13.19□□□□□ -0.3
TIMD4-203ENST00000407087 ERCC6Q03468 1493 aa13.18□□□□□ -0.3
TIMD4-203ENST00000407087 EHMT2Q96KQ7 1210 aa13.14□□□□□ -0.31
TIMD4-203ENST00000407087 CADPSQ9ULU8 1353 aa13.14□□□□□ -0.31
TIMD4-203ENST00000407087 PRDM2Q13029 1718 aa13.13□□□□□ -0.31
TIMD4-203ENST00000407087 CFTRP13569 1480 aa13.1□□□□□ -0.31
TIMD4-203ENST00000407087 PDS5BQ9NTI5 1447 aa13.1□□□□□ -0.31
TIMD4-203ENST00000407087 SCAF1Q9H7N4 1312 aaKnown RBP13.08□□□□□ -0.32
TIMD4-203ENST00000407087 CCDC88BA6NC98 1476 aa13.05□□□□□ -0.32
TIMD4-203ENST00000407087 NPM3O75607 178 aaKnown RBP13.04□□□□□ -0.32
TIMD4-203ENST00000407087 WDR62O43379 1518 aa13.03□□□□□ -0.32
TIMD4-203ENST00000407087 SLC4A1APQ9BWU0 796 aaKnown RBP13.02□□□□□ -0.33
TIMD4-203ENST00000407087 MRC2Q9UBG0 1479 aa13.02□□□□□ -0.33
TIMD4-203ENST00000407087 FANCD2Q9BXW9 1451 aa13.01□□□□□ -0.33
TIMD4-203ENST00000407087 CEP164Q9UPV0 1460 aa13.01□□□□□ -0.33
TIMD4-203ENST00000407087 CNKSR2Q8WXI2 1034 aa12.99□□□□□ -0.33
TIMD4-203ENST00000407087 URB2Q14146 1524 aaKnown RBP12.93□□□□□ -0.34
TIMD4-203ENST00000407087 MAPK8IP2Q13387 824 aaPredicted RBP12.91□□□□□ -0.34
TIMD4-203ENST00000407087 DNMBPQ6XZF7 1577 aa12.83□□□□□ -0.36
TIMD4-203ENST00000407087 TOPBP1Q92547 1522 aa12.83□□□□□ -0.36
TIMD4-203ENST00000407087 ABCC8Q09428 1581 aa12.8□□□□□ -0.36
TIMD4-203ENST00000407087 CSRNP3Q8WYN3 585 aa12.76□□□□□ -0.37
TIMD4-203ENST00000407087 TARBP1Q13395 1621 aaKnown RBP12.76□□□□□ -0.37
TIMD4-203ENST00000407087 IFT140Q96RY7 1462 aa12.74□□□□□ -0.37
TIMD4-203ENST00000407087 SUPT5HO00267 1087 aaKnown RBP12.74□□□□□ -0.37
TIMD4-203ENST00000407087 EIF4G3O43432 1585 aaKnown RBP12.71□□□□□ -0.37
TIMD4-203ENST00000407087 CUX1P39880 1505 aa12.71□□□□□ -0.38
TIMD4-203ENST00000407087 POLA1P09884 1462 aaPredicted RBP12.71□□□□□ -0.38
TIMD4-203ENST00000407087 ZNF608Q9ULD9 1512 aaPredicted RBP12.69□□□□□ -0.38
TIMD4-203ENST00000407087 WDR97A6NE52 1622 aa12.69□□□□□ -0.38
TIMD4-203ENST00000407087 FGD5Q6ZNL6 1462 aa12.65□□□□□ -0.38
TIMD4-203ENST00000407087 BIVM-ERCC5R4GMW8 1640 aa12.64□□□□□ -0.39
TIMD4-203ENST00000407087 RNF216Q9NWF9 866 aaPredicted RBP12.63□□□□□ -0.39
TIMD4-203ENST00000407087 OSCARQ8IYS5 282 aa12.62□□□□□ -0.39
TIMD4-203ENST00000407087 RAD54L2Q9Y4B4 1467 aa12.61□□□□□ -0.39
TIMD4-203ENST00000407087 TOP2BQ02880 1626 aa12.61□□□□□ -0.39
TIMD4-203ENST00000407087 DMRT2Q9Y5R5 561 aa12.6□□□□□ -0.39
TIMD4-203ENST00000407087 SYNJ1O43426 1573 aa12.59□□□□□ -0.39
TIMD4-203ENST00000407087 CHD1O14646 1710 aa12.58□□□□□ -0.4
TIMD4-203ENST00000407087 SOGA1O94964 1423 aa12.58□□□□□ -0.4
TIMD4-203ENST00000407087 ABCA5Q8WWZ7 1642 aa12.57□□□□□ -0.4
TIMD4-203ENST00000407087 AQRO60306 1485 aaKnown RBP eCLIP12.57□□□□□ -0.4
TIMD4-203ENST00000407087 PBRM1Q86U86 1689 aa12.56□□□□□ -0.4
TIMD4-203ENST00000407087 ABCA10Q8WWZ4 1543 aa12.55□□□□□ -0.4
TIMD4-203ENST00000407087 WRNQ14191 1432 aaPredicted RBP eCLIP12.54□□□□□ -0.4
TIMD4-203ENST00000407087 ZBTB22O15209 634 aa12.52□□□□□ -0.41
TIMD4-203ENST00000407087 TDRD9Q8NDG6 1382 aaKnown RBP12.51□□□□□ -0.41
TIMD4-203ENST00000407087 MAGI1Q96QZ7 1491 aaPredicted RBP12.5□□□□□ -0.41
TIMD4-203ENST00000407087 RIMBP3CA6NJZ7 1639 aa12.49□□□□□ -0.41
TIMD4-203ENST00000407087 RIMBP3BA6NNM3 1639 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms