RNA–Protein interactions for RNA: ENST00000406915.3

SYCE3-202, Transcript of synaptonemal complex central element protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYCE3, Length 448 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3-202ENST00000406915 NISCHQ9Y2I1 1504 aa16.38■□□□□ 0.21
SYCE3-202ENST00000406915 ABCC9O60706 1549 aa16.15■□□□□ 0.18
SYCE3-202ENST00000406915 DNAJC5BQ9UF47 199 aa16.14■□□□□ 0.17
SYCE3-202ENST00000406915 DNAJC5Q9H3Z4 198 aa15.53■□□□□ 0.08
SYCE3-202ENST00000406915 PABPN1Q86U42 306 aaKnown RBP eCLIP15.05■□□□□ -0
SYCE3-202ENST00000406915 CCDC180Q9P1Z9 1646 aa14.91□□□□□ -0.02
SYCE3-202ENST00000406915 RB1CC1Q8TDY2 1594 aa14.81□□□□□ -0.04
SYCE3-202ENST00000406915 DCAF8L2P0C7V8 631 aa14.64□□□□□ -0.07
SYCE3-202ENST00000406915 CECR2Q9BXF3 1484 aa14.63□□□□□ -0.07
SYCE3-202ENST00000406915 TRIM41Q8WV44 630 aa14.53□□□□□ -0.08
SYCE3-202ENST00000406915 NACADO15069 1562 aa14.47□□□□□ -0.09
SYCE3-202ENST00000406915 CC2D2AQ9P2K1 1620 aa14.42□□□□□ -0.1
SYCE3-202ENST00000406915 BICRAQ9NZM4 1560 aa14.38□□□□□ -0.11
SYCE3-202ENST00000406915 UNC13AQ9UPW8 1703 aa14.27□□□□□ -0.12
SYCE3-202ENST00000406915 CUX2O14529 1486 aa14.23□□□□□ -0.13
SYCE3-202ENST00000406915 EIF4G1Q04637 1599 aaKnown RBP14.14□□□□□ -0.15
SYCE3-202ENST00000406915 AEBP2Q6ZN18 517 aaPredicted RBP14.13□□□□□ -0.15
SYCE3-202ENST00000406915 SHROOM4Q9ULL8 1493 aa14.04□□□□□ -0.16
SYCE3-202ENST00000406915 ERCC6Q03468 1493 aa14.02□□□□□ -0.16
SYCE3-202ENST00000406915 MYO15BQ96JP2 1530 aa13.91□□□□□ -0.18
SYCE3-202ENST00000406915 SCRIBQ14160 1630 aa13.77□□□□□ -0.21
SYCE3-202ENST00000406915 OSCARQ8IYS5 282 aa13.66□□□□□ -0.22
SYCE3-202ENST00000406915 TRHP20396 242 aaPredicted RBP13.64□□□□□ -0.23
SYCE3-202ENST00000406915 NESP48681 1621 aa13.57□□□□□ -0.24
SYCE3-202ENST00000406915 ILDR1Q86SU0 546 aaPredicted RBP13.5□□□□□ -0.25
SYCE3-202ENST00000406915 NCAPD3P42695 1498 aa13.46□□□□□ -0.25
SYCE3-202ENST00000406915 CYB5RLQ6IPT4 315 aa13.44□□□□□ -0.26
SYCE3-202ENST00000406915 THOC2Q8NI27 1593 aaKnown RBP13.44□□□□□ -0.26
SYCE3-202ENST00000406915 DCAF1Q9Y4B6 1507 aa13.38□□□□□ -0.27
SYCE3-202ENST00000406915 SMARCA2P51531 1590 aa13.37□□□□□ -0.27
SYCE3-202ENST00000406915 BAZ1AQ9NRL2 1556 aaPredicted RBP13.32□□□□□ -0.28
SYCE3-202ENST00000406915 PDS5BQ9NTI5 1447 aa13.32□□□□□ -0.28
SYCE3-202ENST00000406915 CHIC1Q5VXU3 224 aa13.32□□□□□ -0.28
SYCE3-202ENST00000406915 RIMBP3CA6NJZ7 1639 aa13.31□□□□□ -0.28
SYCE3-202ENST00000406915 RIMBP3BA6NNM3 1639 aa13.31□□□□□ -0.28
SYCE3-202ENST00000406915 RIMBP3Q9UFD9 1639 aa13.31□□□□□ -0.28
SYCE3-202ENST00000406915 ZCCHC6Q5VYS8 1495 aaKnown RBP13.29□□□□□ -0.28
SYCE3-202ENST00000406915 ATAD2BQ9ULI0 1458 aa13.28□□□□□ -0.28
SYCE3-202ENST00000406915 LAMC3Q9Y6N6 1575 aa13.21□□□□□ -0.29
SYCE3-202ENST00000406915 ARHGEF11O15085 1522 aa13.21□□□□□ -0.29
SYCE3-202ENST00000406915 MRC2Q9UBG0 1479 aa13.17□□□□□ -0.3
SYCE3-202ENST00000406915 KIF21AQ7Z4S6 1674 aa13.17□□□□□ -0.3
SYCE3-202ENST00000406915 HMGXB3Q12766 1538 aa13.13□□□□□ -0.31
SYCE3-202ENST00000406915 WDR62O43379 1518 aa13.1□□□□□ -0.31
SYCE3-202ENST00000406915 BAZ1BQ9UIG0 1483 aaKnown RBP13.09□□□□□ -0.31
SYCE3-202ENST00000406915 CADPSQ9ULU8 1353 aa13.07□□□□□ -0.32
SYCE3-202ENST00000406915 ARAP1Q96P48 1450 aa13.03□□□□□ -0.32
SYCE3-202ENST00000406915 FBLN2P98095 1184 aa12.94□□□□□ -0.34
SYCE3-202ENST00000406915 CEP164Q9UPV0 1460 aa12.93□□□□□ -0.34
SYCE3-202ENST00000406915 POTEDQ86YR6 584 aa12.93□□□□□ -0.34
SYCE3-202ENST00000406915 SMARCA4P51532 1647 aa12.9□□□□□ -0.34
SYCE3-202ENST00000406915 KDM4FA0A1W2PPD8 638 aa12.87□□□□□ -0.35
SYCE3-202ENST00000406915 FANCD2Q9BXW9 1451 aa12.86□□□□□ -0.35
SYCE3-202ENST00000406915 RSF1Q96T23 1441 aaPredicted RBP12.84□□□□□ -0.35
SYCE3-202ENST00000406915 ZNF608Q9ULD9 1512 aaPredicted RBP12.83□□□□□ -0.36
SYCE3-202ENST00000406915 URB2Q14146 1524 aaKnown RBP12.78□□□□□ -0.36
SYCE3-202ENST00000406915 FBXO41Q8TF61 875 aa12.77□□□□□ -0.37
SYCE3-202ENST00000406915 PEG3Q9GZU2 1588 aa12.74□□□□□ -0.37
SYCE3-202ENST00000406915 IFT140Q96RY7 1462 aa12.73□□□□□ -0.37
SYCE3-202ENST00000406915 SOCS7O14512 581 aa12.68□□□□□ -0.38
SYCE3-202ENST00000406915 LMTK3Q96Q04 1460 aa12.67□□□□□ -0.38
SYCE3-202ENST00000406915 AQRO60306 1485 aaKnown RBP eCLIP12.66□□□□□ -0.38
SYCE3-202ENST00000406915 CHMP7Q8WUX9 453 aaPredicted RBP12.64□□□□□ -0.39
SYCE3-202ENST00000406915 CFTRP13569 1480 aa12.64□□□□□ -0.39
SYCE3-202ENST00000406915 MROH2BQ7Z745 1585 aa12.63□□□□□ -0.39
SYCE3-202ENST00000406915 CHD1O14646 1710 aa12.6□□□□□ -0.39
SYCE3-202ENST00000406915 ILDR2Q71H61 639 aa12.6□□□□□ -0.39
SYCE3-202ENST00000406915 GAPVD1Q14C86 1478 aa12.59□□□□□ -0.39
SYCE3-202ENST00000406915 FAM69CQ0P6D2 419 aa12.56□□□□□ -0.4
SYCE3-202ENST00000406915 EIF4G3O43432 1585 aaKnown RBP12.55□□□□□ -0.4
SYCE3-202ENST00000406915 ERCC6L2Q5T890 1561 aa12.52□□□□□ -0.4
SYCE3-202ENST00000406915 CLASP1Q7Z460 1538 aa12.5□□□□□ -0.41
SYCE3-202ENST00000406915 TOPBP1Q92547 1522 aa12.48□□□□□ -0.41
SYCE3-202ENST00000406915 TDRD9Q8NDG6 1382 aaKnown RBP12.47□□□□□ -0.41
SYCE3-202ENST00000406915 DISP3Q9P2K9 1392 aa12.47□□□□□ -0.41
SYCE3-202ENST00000406915 HECW2Q9P2P5 1572 aa12.47□□□□□ -0.41
SYCE3-202ENST00000406915 SYNJ2O15056 1496 aa12.46□□□□□ -0.42
SYCE3-202ENST00000406915 SYNJ1O43426 1573 aa12.45□□□□□ -0.42
SYCE3-202ENST00000406915 SNAPC4Q5SXM2 1469 aa12.41□□□□□ -0.42
SYCE3-202ENST00000406915 NPM1P06748 294 aaKnown RBP eCLIP12.41□□□□□ -0.42
SYCE3-202ENST00000406915 ABCC8Q09428 1581 aa12.41□□□□□ -0.42
SYCE3-202ENST00000406915 ADGRL1O94910 1474 aa12.38□□□□□ -0.43
SYCE3-202ENST00000406915 WIZO95785 1651 aa12.37□□□□□ -0.43
SYCE3-202ENST00000406915 SENP3Q9H4L4 574 aaPredicted RBP12.36□□□□□ -0.43
SYCE3-202ENST00000406915 KDM6BO15054 1643 aa12.35□□□□□ -0.43
SYCE3-202ENST00000406915 TARBP1Q13395 1621 aaKnown RBP12.35□□□□□ -0.43
SYCE3-202ENST00000406915 SOGA1O94964 1423 aa12.35□□□□□ -0.43
SYCE3-202ENST00000406915 RAD54L2Q9Y4B4 1467 aa12.34□□□□□ -0.43
SYCE3-202ENST00000406915 KIF13AQ9H1H9 1805 aa12.34□□□□□ -0.43
SYCE3-202ENST00000406915 ABCC10Q5T3U5 1492 aa12.34□□□□□ -0.43
SYCE3-202ENST00000406915 MAGI1Q96QZ7 1491 aaPredicted RBP12.3□□□□□ -0.44
SYCE3-202ENST00000406915 POLA1P09884 1462 aaPredicted RBP12.29□□□□□ -0.44
SYCE3-202ENST00000406915 DNMBPQ6XZF7 1577 aa12.28□□□□□ -0.44
SYCE3-202ENST00000406915 GRIN2BQ13224 1484 aa12.26□□□□□ -0.45
SYCE3-202ENST00000406915 CERKQ8TCT0 537 aa12.2□□□□□ -0.46
SYCE3-202ENST00000406915 CEP170Q5SW79 1584 aa12.18□□□□□ -0.46
SYCE3-202ENST00000406915 DIP2BQ9P265 1576 aa12.15□□□□□ -0.46
SYCE3-202ENST00000406915 JPH4Q96JJ6 628 aa12.15□□□□□ -0.46
SYCE3-202ENST00000406915 TSPOAP1O95153 1857 aa12.13□□□□□ -0.47
SYCE3-202ENST00000406915 CCDC88BA6NC98 1476 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms