RNA–Protein interactions for RNA: ENST00000406910.6

PVALB-203, Transcript of parvalbumin, humanhuman

TSL 3

Gene PVALB, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVALB-203ENST00000406910 AEBP2Q6ZN18 517 aaPredicted RBP16.21■□□□□ 0.19
PVALB-203ENST00000406910 CHIC1Q5VXU3 224 aa15.51■□□□□ 0.07
PVALB-203ENST00000406910 NISCHQ9Y2I1 1504 aa14.2□□□□□ -0.14
PVALB-203ENST00000406910 PHF23Q9BUL5 403 aaPredicted RBP13.68□□□□□ -0.22
PVALB-203ENST00000406910 SENP3Q9H4L4 574 aaPredicted RBP13.67□□□□□ -0.22
PVALB-203ENST00000406910 FOXD1Q16676 465 aa12.81□□□□□ -0.36
PVALB-203ENST00000406910 CCDC180Q9P1Z9 1646 aa12.56□□□□□ -0.4
PVALB-203ENST00000406910 PLPPR3Q6T4P5 718 aa12.42□□□□□ -0.42
PVALB-203ENST00000406910 ABCC9O60706 1549 aa12.17□□□□□ -0.46
PVALB-203ENST00000406910 PPP6R1Q9UPN7 881 aa12.16□□□□□ -0.46
PVALB-203ENST00000406910 ADRA2BP18089 450 aa12.09□□□□□ -0.47
PVALB-203ENST00000406910 PIAS4Q8N2W9 510 aaPredicted RBP11.94□□□□□ -0.5
PVALB-203ENST00000406910 ZCCHC6Q5VYS8 1495 aaKnown RBP11.85□□□□□ -0.51
PVALB-203ENST00000406910 MSH5O43196 834 aa11.81□□□□□ -0.52
PVALB-203ENST00000406910 DCAF8L2P0C7V8 631 aa11.78□□□□□ -0.52
PVALB-203ENST00000406910 NACADO15069 1562 aa11.77□□□□□ -0.53
PVALB-203ENST00000406910 RB1CC1Q8TDY2 1594 aa11.75□□□□□ -0.53
PVALB-203ENST00000406910 MYO15BQ96JP2 1530 aa11.75□□□□□ -0.53
PVALB-203ENST00000406910 DCAF1Q9Y4B6 1507 aa11.75□□□□□ -0.53
PVALB-203ENST00000406910 UNC13AQ9UPW8 1703 aa11.51□□□□□ -0.57
PVALB-203ENST00000406910 SCRIBQ14160 1630 aa11.47□□□□□ -0.57
PVALB-203ENST00000406910 BICRAQ9NZM4 1560 aa11.43□□□□□ -0.58
PVALB-203ENST00000406910 PABPN1Q86U42 306 aaKnown RBP eCLIP11.4□□□□□ -0.58
PVALB-203ENST00000406910 POTEDQ86YR6 584 aa11.29□□□□□ -0.6
PVALB-203ENST00000406910 SHROOM4Q9ULL8 1493 aa11.28□□□□□ -0.6
PVALB-203ENST00000406910 EIF4G1Q04637 1599 aaKnown RBP11.1□□□□□ -0.63
PVALB-203ENST00000406910 DNAJC5BQ9UF47 199 aa11.09□□□□□ -0.63
PVALB-203ENST00000406910 MAPK8IP2Q13387 824 aaPredicted RBP11.07□□□□□ -0.64
PVALB-203ENST00000406910 CECR2Q9BXF3 1484 aa11.06□□□□□ -0.64
PVALB-203ENST00000406910 CC2D2AQ9P2K1 1620 aa11.02□□□□□ -0.65
PVALB-203ENST00000406910 SMARCA4P51532 1647 aa10.98□□□□□ -0.65
PVALB-203ENST00000406910 BAZ1AQ9NRL2 1556 aaPredicted RBP10.98□□□□□ -0.65
PVALB-203ENST00000406910 MROH2BQ7Z745 1585 aa10.95□□□□□ -0.66
PVALB-203ENST00000406910 PPP4R3CPQ6ZMV5 832 aa10.95□□□□□ -0.66
PVALB-203ENST00000406910 SCAF1Q9H7N4 1312 aaKnown RBP10.94□□□□□ -0.66
PVALB-203ENST00000406910 DMRT2Q9Y5R5 561 aa10.92□□□□□ -0.66
PVALB-203ENST00000406910 ATAD2BQ9ULI0 1458 aa10.89□□□□□ -0.67
PVALB-203ENST00000406910 PEG3Q9GZU2 1588 aa10.88□□□□□ -0.67
PVALB-203ENST00000406910 SMARCA2P51531 1590 aa10.87□□□□□ -0.67
PVALB-203ENST00000406910 NCAPD3P42695 1498 aa10.87□□□□□ -0.67
PVALB-203ENST00000406910 RSF1Q96T23 1441 aaPredicted RBP10.86□□□□□ -0.67
PVALB-203ENST00000406910 WIZO95785 1651 aa10.84□□□□□ -0.67
PVALB-203ENST00000406910 HMGXB3Q12766 1538 aa10.82□□□□□ -0.68
PVALB-203ENST00000406910 BAZ1BQ9UIG0 1483 aaKnown RBP10.8□□□□□ -0.68
PVALB-203ENST00000406910 TOP2AP11388 1531 aaKnown RBP10.72□□□□□ -0.69
PVALB-203ENST00000406910 CNKSR2Q8WXI2 1034 aa10.67□□□□□ -0.7
PVALB-203ENST00000406910 SUPT5HO00267 1087 aaKnown RBP10.66□□□□□ -0.7
PVALB-203ENST00000406910 CCDC88BA6NC98 1476 aa10.61□□□□□ -0.71
PVALB-203ENST00000406910 HOXD11P31277 338 aaPredicted RBP10.6□□□□□ -0.71
PVALB-203ENST00000406910 NESP48681 1621 aa10.58□□□□□ -0.72
PVALB-203ENST00000406910 LAMC3Q9Y6N6 1575 aa10.56□□□□□ -0.72
PVALB-203ENST00000406910 CADPSQ9ULU8 1353 aa10.55□□□□□ -0.72
PVALB-203ENST00000406910 RNF216Q9NWF9 866 aaPredicted RBP10.54□□□□□ -0.72
PVALB-203ENST00000406910 CFTRP13569 1480 aa10.52□□□□□ -0.73
PVALB-203ENST00000406910 NCBP3Q53F19 620 aaKnown RBP10.49□□□□□ -0.73
PVALB-203ENST00000406910 PDS5BQ9NTI5 1447 aa10.47□□□□□ -0.73
PVALB-203ENST00000406910 NPM3O75607 178 aaKnown RBP10.46□□□□□ -0.73
PVALB-203ENST00000406910 KIF21AQ7Z4S6 1674 aa10.46□□□□□ -0.74
PVALB-203ENST00000406910 ERCC6Q03468 1493 aa10.45□□□□□ -0.74
PVALB-203ENST00000406910 PRDM2Q13029 1718 aa10.44□□□□□ -0.74
PVALB-203ENST00000406910 KCNA4P22459 653 aa10.43□□□□□ -0.74
PVALB-203ENST00000406910 FANCD2Q9BXW9 1451 aa10.42□□□□□ -0.74
PVALB-203ENST00000406910 CEP164Q9UPV0 1460 aa10.4□□□□□ -0.74
PVALB-203ENST00000406910 THOC2Q8NI27 1593 aaKnown RBP10.39□□□□□ -0.75
PVALB-203ENST00000406910 DCAF8L1A6NGE4 600 aa10.37□□□□□ -0.75
PVALB-203ENST00000406910 MRC2Q9UBG0 1479 aa10.36□□□□□ -0.75
PVALB-203ENST00000406910 WDR62O43379 1518 aa10.33□□□□□ -0.76
PVALB-203ENST00000406910 URB2Q14146 1524 aaKnown RBP10.33□□□□□ -0.76
PVALB-203ENST00000406910 CUX2O14529 1486 aa10.31□□□□□ -0.76
PVALB-203ENST00000406910 TOPBP1Q92547 1522 aa10.28□□□□□ -0.76
PVALB-203ENST00000406910 DNMBPQ6XZF7 1577 aa10.28□□□□□ -0.76
PVALB-203ENST00000406910 ABCC8Q09428 1581 aa10.27□□□□□ -0.76
PVALB-203ENST00000406910 CUX1P39880 1505 aa10.26□□□□□ -0.77
PVALB-203ENST00000406910 WRNQ14191 1432 aaPredicted RBP eCLIP10.22□□□□□ -0.77
PVALB-203ENST00000406910 SYNJ1O43426 1573 aa10.22□□□□□ -0.77
PVALB-203ENST00000406910 POLA1P09884 1462 aaPredicted RBP10.21□□□□□ -0.78
PVALB-203ENST00000406910 TOP2BQ02880 1626 aa10.2□□□□□ -0.78
PVALB-203ENST00000406910 FGD5Q6ZNL6 1462 aa10.2□□□□□ -0.78
PVALB-203ENST00000406910 BIVM-ERCC5R4GMW8 1640 aa10.2□□□□□ -0.78
PVALB-203ENST00000406910 IFT140Q96RY7 1462 aa10.18□□□□□ -0.78
PVALB-203ENST00000406910 TARBP1Q13395 1621 aaKnown RBP10.18□□□□□ -0.78
PVALB-203ENST00000406910 RAD54L2Q9Y4B4 1467 aa10.17□□□□□ -0.78
PVALB-203ENST00000406910 RNF39Q9H2S5 420 aa10.16□□□□□ -0.78
PVALB-203ENST00000406910 SOGA1O94964 1423 aa10.16□□□□□ -0.78
PVALB-203ENST00000406910 ZNF608Q9ULD9 1512 aaPredicted RBP10.14□□□□□ -0.79
PVALB-203ENST00000406910 WDR97A6NE52 1622 aa10.12□□□□□ -0.79
PVALB-203ENST00000406910 EIF4G3O43432 1585 aaKnown RBP10.1□□□□□ -0.79
PVALB-203ENST00000406910 ABCA10Q8WWZ4 1543 aa10.1□□□□□ -0.79
PVALB-203ENST00000406910 AQRO60306 1485 aaKnown RBP eCLIP10.1□□□□□ -0.79
PVALB-203ENST00000406910 TDRD9Q8NDG6 1382 aaKnown RBP10.09□□□□□ -0.79
PVALB-203ENST00000406910 ABCA5Q8WWZ7 1642 aa10.07□□□□□ -0.8
PVALB-203ENST00000406910 TRIM41Q8WV44 630 aa10.06□□□□□ -0.8
PVALB-203ENST00000406910 GAPVD1Q14C86 1478 aa10.04□□□□□ -0.8
PVALB-203ENST00000406910 CACNB1Q02641 598 aaPredicted RBP10.02□□□□□ -0.81
PVALB-203ENST00000406910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.02□□□□□ -0.81
PVALB-203ENST00000406910 GRIN2BQ13224 1484 aa10.02□□□□□ -0.81
PVALB-203ENST00000406910 PBRM1Q86U86 1689 aa10.02□□□□□ -0.81
PVALB-203ENST00000406910 SNAPC4Q5SXM2 1469 aa10□□□□□ -0.81
PVALB-203ENST00000406910 KIF27Q86VH2 1401 aa9.99□□□□□ -0.81
PVALB-203ENST00000406910 RUSC2Q8N2Y8 1516 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms