RNA–Protein interactions for RNA: ENST00000398461.5

MEG3-202, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 3,452 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-202ENST00000398461 NISCHQ9Y2I1 1504 aa28.03■■■□□ 2.08
MEG3-202ENST00000398461 DCAF8L2P0C7V8 631 aa24.27■■□□□ 1.48
MEG3-202ENST00000398461 CCDC180Q9P1Z9 1646 aa24.03■■□□□ 1.44
MEG3-202ENST00000398461 SHROOM4Q9ULL8 1493 aa23.8■■□□□ 1.4
MEG3-202ENST00000398461 ABCC9O60706 1549 aa23.64■■□□□ 1.37
MEG3-202ENST00000398461 ZCCHC6Q5VYS8 1495 aaKnown RBP23.45■■□□□ 1.35
MEG3-202ENST00000398461 SUPT5HO00267 1087 aaKnown RBP22.91■■□□□ 1.26
MEG3-202ENST00000398461 SCRIBQ14160 1630 aa22.78■■□□□ 1.24
MEG3-202ENST00000398461 DCAF1Q9Y4B6 1507 aa22.73■■□□□ 1.23
MEG3-202ENST00000398461 PABPN1Q86U42 306 aaKnown RBP eCLIP22.58■■□□□ 1.21
MEG3-202ENST00000398461 NACADO15069 1562 aa22.56■■□□□ 1.2
MEG3-202ENST00000398461 RB1CC1Q8TDY2 1594 aa22.48■■□□□ 1.19
MEG3-202ENST00000398461 MYO15BQ96JP2 1530 aa22.38■■□□□ 1.17
MEG3-202ENST00000398461 CECR2Q9BXF3 1484 aa22.12■■□□□ 1.13
MEG3-202ENST00000398461 UNC13AQ9UPW8 1703 aa22.09■■□□□ 1.13
MEG3-202ENST00000398461 RSF1Q96T23 1441 aaPredicted RBP21.92■■□□□ 1.1
MEG3-202ENST00000398461 BICRAQ9NZM4 1560 aa21.88■■□□□ 1.09
MEG3-202ENST00000398461 MROH2BQ7Z745 1585 aa21.86■■□□□ 1.09
MEG3-202ENST00000398461 WIZO95785 1651 aa21.7■■□□□ 1.06
MEG3-202ENST00000398461 BAZ1AQ9NRL2 1556 aaPredicted RBP21.58■■□□□ 1.05
MEG3-202ENST00000398461 SMARCA4P51532 1647 aa21.52■■□□□ 1.04
MEG3-202ENST00000398461 CHIC1Q5VXU3 224 aa21.52■■□□□ 1.04
MEG3-202ENST00000398461 EHMT2Q96KQ7 1210 aa21.38■■□□□ 1.01
MEG3-202ENST00000398461 FAM9AQ8IZU1 332 aaPredicted RBP21.31■■□□□ 1
MEG3-202ENST00000398461 EIF4G1Q04637 1599 aaKnown RBP21.3■■□□□ 1
MEG3-202ENST00000398461 ATAD2BQ9ULI0 1458 aa21.28■■□□□ 1
MEG3-202ENST00000398461 TRIM41Q8WV44 630 aa21.25■□□□□ 0.99
MEG3-202ENST00000398461 BAZ1BQ9UIG0 1483 aaKnown RBP21.23■□□□□ 0.99
MEG3-202ENST00000398461 CCDC88BA6NC98 1476 aa21.23■□□□□ 0.99
MEG3-202ENST00000398461 DNAJC5BQ9UF47 199 aa21.21■□□□□ 0.99
MEG3-202ENST00000398461 TOP2AP11388 1531 aaKnown RBP21.18■□□□□ 0.98
MEG3-202ENST00000398461 LOC105371045A0A1W2PR82 267 aa21.09■□□□□ 0.97
MEG3-202ENST00000398461 SMARCA2P51531 1590 aa21.08■□□□□ 0.97
MEG3-202ENST00000398461 CC2D2AQ9P2K1 1620 aa21.06■□□□□ 0.96
MEG3-202ENST00000398461 ABCC8Q09428 1581 aa20.98■□□□□ 0.95
MEG3-202ENST00000398461 PEG3Q9GZU2 1588 aa20.97■□□□□ 0.95
MEG3-202ENST00000398461 NCAPD3P42695 1498 aa20.95■□□□□ 0.94
MEG3-202ENST00000398461 HMGXB3Q12766 1538 aa20.77■□□□□ 0.92
MEG3-202ENST00000398461 NESP48681 1621 aa20.72■□□□□ 0.91
MEG3-202ENST00000398461 WRNQ14191 1432 aaPredicted RBP eCLIP20.66■□□□□ 0.9
MEG3-202ENST00000398461 RANGAP1P46060 587 aaPredicted RBP20.63■□□□□ 0.89
MEG3-202ENST00000398461 SOGA1O94964 1423 aa20.62■□□□□ 0.89
MEG3-202ENST00000398461 CADPSQ9ULU8 1353 aa20.61■□□□□ 0.89
MEG3-202ENST00000398461 RUSC2Q8N2Y8 1516 aa20.59■□□□□ 0.89
MEG3-202ENST00000398461 CFTRP13569 1480 aa20.55■□□□□ 0.88
MEG3-202ENST00000398461 SYNJ1O43426 1573 aa20.53■□□□□ 0.88
MEG3-202ENST00000398461 UBTFP17480 764 aaKnown RBP20.47■□□□□ 0.87
MEG3-202ENST00000398461 PPARGC1BQ86YN6 1023 aaKnown RBP20.43■□□□□ 0.86
MEG3-202ENST00000398461 FANCD2Q9BXW9 1451 aa20.42■□□□□ 0.86
MEG3-202ENST00000398461 CSRNP3Q8WYN3 585 aa20.41■□□□□ 0.86
MEG3-202ENST00000398461 CUX1P39880 1505 aa20.37■□□□□ 0.85
MEG3-202ENST00000398461 TTBK1Q5TCY1 1321 aaPredicted RBP20.37■□□□□ 0.85
MEG3-202ENST00000398461 RAD54L2Q9Y4B4 1467 aa20.25■□□□□ 0.83
MEG3-202ENST00000398461 CEP164Q9UPV0 1460 aa20.24■□□□□ 0.83
MEG3-202ENST00000398461 TOP2BQ02880 1626 aa20.24■□□□□ 0.83
MEG3-202ENST00000398461 PDS5BQ9NTI5 1447 aa20.23■□□□□ 0.83
MEG3-202ENST00000398461 FGD5Q6ZNL6 1462 aa20.22■□□□□ 0.83
MEG3-202ENST00000398461 CUX2O14529 1486 aa20.19■□□□□ 0.82
MEG3-202ENST00000398461 ERCC6Q03468 1493 aa20.19■□□□□ 0.82
MEG3-202ENST00000398461 TDRD9Q8NDG6 1382 aaKnown RBP20.18■□□□□ 0.82
MEG3-202ENST00000398461 LAMC3Q9Y6N6 1575 aa20.17■□□□□ 0.82
MEG3-202ENST00000398461 KIF21AQ7Z4S6 1674 aa20.16■□□□□ 0.82
MEG3-202ENST00000398461 URB2Q14146 1524 aaKnown RBP20.15■□□□□ 0.82
MEG3-202ENST00000398461 TOPBP1Q92547 1522 aa20.14■□□□□ 0.81
MEG3-202ENST00000398461 PCGF6Q9BYE7 350 aa20.13■□□□□ 0.81
MEG3-202ENST00000398461 RAPGEF2Q9Y4G8 1499 aa20.1■□□□□ 0.81
MEG3-202ENST00000398461 BIVM-ERCC5R4GMW8 1640 aa20.1■□□□□ 0.81
MEG3-202ENST00000398461 POLA1P09884 1462 aaPredicted RBP20.1■□□□□ 0.81
MEG3-202ENST00000398461 PRDM2Q13029 1718 aa20.09■□□□□ 0.81
MEG3-202ENST00000398461 KIF27Q86VH2 1401 aa20.09■□□□□ 0.81
MEG3-202ENST00000398461 P3H3Q8IVL6 736 aa20.03■□□□□ 0.8
MEG3-202ENST00000398461 EEA1Q15075 1411 aa20.02■□□□□ 0.79
MEG3-202ENST00000398461 DNMBPQ6XZF7 1577 aa20.01■□□□□ 0.79
MEG3-202ENST00000398461 CEP162Q5TB80 1403 aa19.99■□□□□ 0.79
MEG3-202ENST00000398461 IGF1RP08069 1367 aa19.99■□□□□ 0.79
MEG3-202ENST00000398461 FBLN2P98095 1184 aa19.99■□□□□ 0.79
MEG3-202ENST00000398461 GOLGA3Q08378 1498 aa19.99■□□□□ 0.79
MEG3-202ENST00000398461 AQRO60306 1485 aaKnown RBP eCLIP19.97■□□□□ 0.79
MEG3-202ENST00000398461 CARMIL1Q5VZK9 1371 aa19.93■□□□□ 0.78
MEG3-202ENST00000398461 ATP1B4Q9UN42 357 aaPredicted RBP19.92■□□□□ 0.78
MEG3-202ENST00000398461 TNIKQ9UKE5 1360 aa19.91■□□□□ 0.78
MEG3-202ENST00000398461 MRC2Q9UBG0 1479 aa19.91■□□□□ 0.78
MEG3-202ENST00000398461 ZNF608Q9ULD9 1512 aaPredicted RBP19.88■□□□□ 0.77
MEG3-202ENST00000398461 CLIP1P30622 1438 aa19.84■□□□□ 0.77
MEG3-202ENST00000398461 PRXQ9BXM0 1461 aa19.84■□□□□ 0.77
MEG3-202ENST00000398461 GAPVD1Q14C86 1478 aa19.82■□□□□ 0.76
MEG3-202ENST00000398461 HRCP23327 699 aa19.82■□□□□ 0.76
MEG3-202ENST00000398461 ABCA10Q8WWZ4 1543 aa19.82■□□□□ 0.76
MEG3-202ENST00000398461 KIF21BO75037 1637 aa19.77■□□□□ 0.76
MEG3-202ENST00000398461 ARID3CA6NKF2 412 aa19.75■□□□□ 0.75
MEG3-202ENST00000398461 APLP2Q06481 763 aa19.73■□□□□ 0.75
MEG3-202ENST00000398461 CHMP7Q8WUX9 453 aaPredicted RBP19.71■□□□□ 0.75
MEG3-202ENST00000398461 TARBP1Q13395 1621 aaKnown RBP19.69■□□□□ 0.74
MEG3-202ENST00000398461 TRIM26Q12899 539 aaPredicted RBP19.68■□□□□ 0.74
MEG3-202ENST00000398461 WDR62O43379 1518 aa19.68■□□□□ 0.74
MEG3-202ENST00000398461 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
MEG3-202ENST00000398461 IFT140Q96RY7 1462 aa19.63■□□□□ 0.73
MEG3-202ENST00000398461 ERICH3Q5RHP9 1530 aa19.62■□□□□ 0.73
MEG3-202ENST00000398461 ARAP1Q96P48 1450 aa19.61■□□□□ 0.73
MEG3-202ENST00000398461 SNAPC4Q5SXM2 1469 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms