RNA–Protein interactions for RNA: ENST00000397305.3

RBFOX2-204, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 5

Gene RBFOX2, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-204ENST00000397305 NISCHQ9Y2I1 1504 aa22.59■■□□□ 1.21
RBFOX2-204ENST00000397305 CCDC180Q9P1Z9 1646 aa19.73■□□□□ 0.75
RBFOX2-204ENST00000397305 AEBP2Q6ZN18 517 aaPredicted RBP19.43■□□□□ 0.7
RBFOX2-204ENST00000397305 PELP1Q8IZL8 1130 aaKnown RBP19.41■□□□□ 0.7
RBFOX2-204ENST00000397305 MYT1Q01538 1121 aa19.36■□□□□ 0.69
RBFOX2-204ENST00000397305 CHIC1Q5VXU3 224 aa19.13■□□□□ 0.65
RBFOX2-204ENST00000397305 ZCCHC6Q5VYS8 1495 aaKnown RBP18.98■□□□□ 0.63
RBFOX2-204ENST00000397305 TTBK1Q5TCY1 1321 aaPredicted RBP18.81■□□□□ 0.6
RBFOX2-204ENST00000397305 DCAF8L2P0C7V8 631 aa18.74■□□□□ 0.59
RBFOX2-204ENST00000397305 DCAF1Q9Y4B6 1507 aa18.68■□□□□ 0.58
RBFOX2-204ENST00000397305 ABCC9O60706 1549 aa18.61■□□□□ 0.57
RBFOX2-204ENST00000397305 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.55
RBFOX2-204ENST00000397305 MYO15BQ96JP2 1530 aa18.44■□□□□ 0.54
RBFOX2-204ENST00000397305 NACADO15069 1562 aa18.36■□□□□ 0.53
RBFOX2-204ENST00000397305 RB1CC1Q8TDY2 1594 aa18.22■□□□□ 0.51
RBFOX2-204ENST00000397305 SCRIBQ14160 1630 aa18.16■□□□□ 0.5
RBFOX2-204ENST00000397305 SUPT5HO00267 1087 aaKnown RBP17.85■□□□□ 0.45
RBFOX2-204ENST00000397305 SLC24A1O60721 1099 aa17.83■□□□□ 0.44
RBFOX2-204ENST00000397305 UNC13AQ9UPW8 1703 aa17.77■□□□□ 0.44
RBFOX2-204ENST00000397305 ERICH6Q7L0X2 663 aa17.75■□□□□ 0.43
RBFOX2-204ENST00000397305 APLP2Q06481 763 aa17.63■□□□□ 0.41
RBFOX2-204ENST00000397305 PRKCSHP14314 528 aaPredicted RBP17.61■□□□□ 0.41
RBFOX2-204ENST00000397305 BICRAQ9NZM4 1560 aa17.56■□□□□ 0.4
RBFOX2-204ENST00000397305 PABPN1Q86U42 306 aaKnown RBP eCLIP17.55■□□□□ 0.4
RBFOX2-204ENST00000397305 RSF1Q96T23 1441 aaPredicted RBP17.53■□□□□ 0.4
RBFOX2-204ENST00000397305 CECR2Q9BXF3 1484 aa17.51■□□□□ 0.39
RBFOX2-204ENST00000397305 BAZ1AQ9NRL2 1556 aaPredicted RBP17.49■□□□□ 0.39
RBFOX2-204ENST00000397305 MROH2BQ7Z745 1585 aa17.44■□□□□ 0.38
RBFOX2-204ENST00000397305 SMARCA4P51532 1647 aa17.38■□□□□ 0.37
RBFOX2-204ENST00000397305 WIZO95785 1651 aa17.32■□□□□ 0.36
RBFOX2-204ENST00000397305 HRCP23327 699 aa17.23■□□□□ 0.35
RBFOX2-204ENST00000397305 TOP2AP11388 1531 aaKnown RBP17.18■□□□□ 0.34
RBFOX2-204ENST00000397305 DAXXQ9UER7 740 aaPredicted RBP17.14■□□□□ 0.33
RBFOX2-204ENST00000397305 SMARCA2P51531 1590 aa17.12■□□□□ 0.33
RBFOX2-204ENST00000397305 PEG3Q9GZU2 1588 aa17.12■□□□□ 0.33
RBFOX2-204ENST00000397305 EIF4G1Q04637 1599 aaKnown RBP17.08■□□□□ 0.32
RBFOX2-204ENST00000397305 ATAD2BQ9ULI0 1458 aa17.06■□□□□ 0.32
RBFOX2-204ENST00000397305 BCL11AQ9H165 835 aa17.04■□□□□ 0.32
RBFOX2-204ENST00000397305 BAZ1BQ9UIG0 1483 aaKnown RBP17.04■□□□□ 0.32
RBFOX2-204ENST00000397305 CCDC88BA6NC98 1476 aa16.96■□□□□ 0.31
RBFOX2-204ENST00000397305 HMGXB3Q12766 1538 aa16.92■□□□□ 0.3
RBFOX2-204ENST00000397305 NCAPD3P42695 1498 aa16.89■□□□□ 0.29
RBFOX2-204ENST00000397305 SCAF1Q9H7N4 1312 aaKnown RBP16.85■□□□□ 0.29
RBFOX2-204ENST00000397305 CC2D2AQ9P2K1 1620 aa16.82■□□□□ 0.28
RBFOX2-204ENST00000397305 TRIM41Q8WV44 630 aa16.79■□□□□ 0.28
RBFOX2-204ENST00000397305 PHF23Q9BUL5 403 aaPredicted RBP16.72■□□□□ 0.27
RBFOX2-204ENST00000397305 FAM9AQ8IZU1 332 aaPredicted RBP16.7■□□□□ 0.26
RBFOX2-204ENST00000397305 SENP3Q9H4L4 574 aaPredicted RBP16.7■□□□□ 0.26
RBFOX2-204ENST00000397305 CENPBP07199 599 aaPredicted RBP16.65■□□□□ 0.26
RBFOX2-204ENST00000397305 ABCC8Q09428 1581 aa16.63■□□□□ 0.25
RBFOX2-204ENST00000397305 WRNQ14191 1432 aaPredicted RBP eCLIP16.55■□□□□ 0.24
RBFOX2-204ENST00000397305 CFTRP13569 1480 aa16.54■□□□□ 0.24
RBFOX2-204ENST00000397305 PRDM2Q13029 1718 aa16.52■□□□□ 0.24
RBFOX2-204ENST00000397305 CADPSQ9ULU8 1353 aa16.5■□□□□ 0.23
RBFOX2-204ENST00000397305 SYNJ1O43426 1573 aa16.44■□□□□ 0.22
RBFOX2-204ENST00000397305 EIF5BO60841 1220 aaKnown RBP16.43■□□□□ 0.22
RBFOX2-204ENST00000397305 TOP2BQ02880 1626 aa16.39■□□□□ 0.21
RBFOX2-204ENST00000397305 EEA1Q15075 1411 aa16.38■□□□□ 0.21
RBFOX2-204ENST00000397305 LOC105371045A0A1W2PR82 267 aa16.38■□□□□ 0.21
RBFOX2-204ENST00000397305 BIVM-ERCC5R4GMW8 1640 aa16.37■□□□□ 0.21
RBFOX2-204ENST00000397305 LAMC3Q9Y6N6 1575 aa16.37■□□□□ 0.21
RBFOX2-204ENST00000397305 FANCD2Q9BXW9 1451 aa16.34■□□□□ 0.21
RBFOX2-204ENST00000397305 CUX1P39880 1505 aa16.32■□□□□ 0.2
RBFOX2-204ENST00000397305 DNAJC5BQ9UF47 199 aa16.32■□□□□ 0.2
RBFOX2-204ENST00000397305 SOGA1O94964 1423 aa16.31■□□□□ 0.2
RBFOX2-204ENST00000397305 NESP48681 1621 aa16.3■□□□□ 0.2
RBFOX2-204ENST00000397305 EHMT2Q96KQ7 1210 aa16.27■□□□□ 0.2
RBFOX2-204ENST00000397305 CEP164Q9UPV0 1460 aa16.27■□□□□ 0.19
RBFOX2-204ENST00000397305 PDS5BQ9NTI5 1447 aa16.27■□□□□ 0.19
RBFOX2-204ENST00000397305 CSRNP3Q8WYN3 585 aa16.24■□□□□ 0.19
RBFOX2-204ENST00000397305 ACIN1Q9UKV3 1341 aaKnown RBP16.22■□□□□ 0.19
RBFOX2-204ENST00000397305 RUSC2Q8N2Y8 1516 aa16.21■□□□□ 0.19
RBFOX2-204ENST00000397305 ANP32EQ9BTT0 268 aa16.21■□□□□ 0.19
RBFOX2-204ENST00000397305 DNMBPQ6XZF7 1577 aa16.21■□□□□ 0.18
RBFOX2-204ENST00000397305 FGD5Q6ZNL6 1462 aa16.16■□□□□ 0.18
RBFOX2-204ENST00000397305 KIF27Q86VH2 1401 aa16.16■□□□□ 0.18
RBFOX2-204ENST00000397305 GOLGA3Q08378 1498 aa16.16■□□□□ 0.18
RBFOX2-204ENST00000397305 TOPBP1Q92547 1522 aa16.15■□□□□ 0.18
RBFOX2-204ENST00000397305 KIF21AQ7Z4S6 1674 aa16.14■□□□□ 0.18
RBFOX2-204ENST00000397305 KIF21BO75037 1637 aa16.12■□□□□ 0.17
RBFOX2-204ENST00000397305 PPARGC1BQ86YN6 1023 aaKnown RBP16.12■□□□□ 0.17
RBFOX2-204ENST00000397305 UBTFP17480 764 aaKnown RBP16.11■□□□□ 0.17
RBFOX2-204ENST00000397305 UBE2Q2Q8WVN8 375 aa16.11■□□□□ 0.17
RBFOX2-204ENST00000397305 ZEB1P37275 1124 aaPredicted RBP16.1■□□□□ 0.17
RBFOX2-204ENST00000397305 CUX2O14529 1486 aa16.1■□□□□ 0.17
RBFOX2-204ENST00000397305 URB2Q14146 1524 aaKnown RBP16.09■□□□□ 0.17
RBFOX2-204ENST00000397305 TNIKQ9UKE5 1360 aa16.07■□□□□ 0.16
RBFOX2-204ENST00000397305 POLA1P09884 1462 aaPredicted RBP16.06■□□□□ 0.16
RBFOX2-204ENST00000397305 MRC2Q9UBG0 1479 aa16.04■□□□□ 0.16
RBFOX2-204ENST00000397305 ERCC6Q03468 1493 aa16.03■□□□□ 0.16
RBFOX2-204ENST00000397305 ERICH3Q5RHP9 1530 aa16.01■□□□□ 0.15
RBFOX2-204ENST00000397305 ABCA10Q8WWZ4 1543 aa16.01■□□□□ 0.15
RBFOX2-204ENST00000397305 RAD54L2Q9Y4B4 1467 aa16■□□□□ 0.15
RBFOX2-204ENST00000397305 CEP162Q5TB80 1403 aa16■□□□□ 0.15
RBFOX2-204ENST00000397305 RAPGEF2Q9Y4G8 1499 aa15.99■□□□□ 0.15
RBFOX2-204ENST00000397305 PRXQ9BXM0 1461 aa15.98■□□□□ 0.15
RBFOX2-204ENST00000397305 WDR97A6NE52 1622 aa15.94■□□□□ 0.14
RBFOX2-204ENST00000397305 IGF1RP08069 1367 aa15.93■□□□□ 0.14
RBFOX2-204ENST00000397305 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
RBFOX2-204ENST00000397305 WDR62O43379 1518 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 207.1 ms