RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 NISCHQ9Y2I1 1504 aa13.55□□□□□ -0.24
RAPGEF4-203ENST00000397087 AEBP2Q6ZN18 517 aaPredicted RBP13.23□□□□□ -0.29
RAPGEF4-203ENST00000397087 CHIC1Q5VXU3 224 aa12.83□□□□□ -0.36
RAPGEF4-203ENST00000397087 CCDC180Q9P1Z9 1646 aa12.08□□□□□ -0.47
RAPGEF4-203ENST00000397087 DCAF1Q9Y4B6 1507 aa11.58□□□□□ -0.56
RAPGEF4-203ENST00000397087 PHF23Q9BUL5 403 aaPredicted RBP11.53□□□□□ -0.56
RAPGEF4-203ENST00000397087 ZCCHC6Q5VYS8 1495 aaKnown RBP11.52□□□□□ -0.56
RAPGEF4-203ENST00000397087 MYO15BQ96JP2 1530 aa11.42□□□□□ -0.58
RAPGEF4-203ENST00000397087 NACADO15069 1562 aa11.01□□□□□ -0.65
RAPGEF4-203ENST00000397087 ABCC9O60706 1549 aa10.89□□□□□ -0.67
RAPGEF4-203ENST00000397087 SENP3Q9H4L4 574 aaPredicted RBP10.83□□□□□ -0.68
RAPGEF4-203ENST00000397087 RB1CC1Q8TDY2 1594 aa10.76□□□□□ -0.69
RAPGEF4-203ENST00000397087 SHROOM4Q9ULL8 1493 aa10.72□□□□□ -0.69
RAPGEF4-203ENST00000397087 UNC13AQ9UPW8 1703 aa10.61□□□□□ -0.71
RAPGEF4-203ENST00000397087 SCRIBQ14160 1630 aa10.57□□□□□ -0.72
RAPGEF4-203ENST00000397087 PEG3Q9GZU2 1588 aa10.52□□□□□ -0.73
RAPGEF4-203ENST00000397087 BAZ1AQ9NRL2 1556 aaPredicted RBP10.52□□□□□ -0.73
RAPGEF4-203ENST00000397087 EIF4G1Q04637 1599 aaKnown RBP10.46□□□□□ -0.74
RAPGEF4-203ENST00000397087 RSF1Q96T23 1441 aaPredicted RBP10.46□□□□□ -0.74
RAPGEF4-203ENST00000397087 SMARCA4P51532 1647 aa10.41□□□□□ -0.74
RAPGEF4-203ENST00000397087 BICRAQ9NZM4 1560 aa10.39□□□□□ -0.75
RAPGEF4-203ENST00000397087 TOP2AP11388 1531 aaKnown RBP10.38□□□□□ -0.75
RAPGEF4-203ENST00000397087 SMARCA2P51531 1590 aa10.33□□□□□ -0.76
RAPGEF4-203ENST00000397087 PLPPR3Q6T4P5 718 aa10.33□□□□□ -0.76
RAPGEF4-203ENST00000397087 MROH2BQ7Z745 1585 aa10.32□□□□□ -0.76
RAPGEF4-203ENST00000397087 WIZO95785 1651 aa10.27□□□□□ -0.77
RAPGEF4-203ENST00000397087 FOXD1Q16676 465 aa10.26□□□□□ -0.77
RAPGEF4-203ENST00000397087 CECR2Q9BXF3 1484 aa10.22□□□□□ -0.77
RAPGEF4-203ENST00000397087 HMGXB3Q12766 1538 aa10.2□□□□□ -0.78
RAPGEF4-203ENST00000397087 PRDM2Q13029 1718 aa10.2□□□□□ -0.78
RAPGEF4-203ENST00000397087 SUPT5HO00267 1087 aaKnown RBP10.12□□□□□ -0.79
RAPGEF4-203ENST00000397087 DCAF8L2P0C7V8 631 aa10.12□□□□□ -0.79
RAPGEF4-203ENST00000397087 PPP6R1Q9UPN7 881 aa10.11□□□□□ -0.79
RAPGEF4-203ENST00000397087 EEA1Q15075 1411 aa10.07□□□□□ -0.8
RAPGEF4-203ENST00000397087 BIVM-ERCC5R4GMW8 1640 aa10.05□□□□□ -0.8
RAPGEF4-203ENST00000397087 CCDC88BA6NC98 1476 aa10.05□□□□□ -0.8
RAPGEF4-203ENST00000397087 ATAD2BQ9ULI0 1458 aa10.05□□□□□ -0.8
RAPGEF4-203ENST00000397087 NCAPD3P42695 1498 aa10.04□□□□□ -0.8
RAPGEF4-203ENST00000397087 ADRA2BP18089 450 aa9.98□□□□□ -0.81
RAPGEF4-203ENST00000397087 KIF21BO75037 1637 aa9.97□□□□□ -0.81
RAPGEF4-203ENST00000397087 BAZ1BQ9UIG0 1483 aaKnown RBP9.95□□□□□ -0.82
RAPGEF4-203ENST00000397087 TOP2BQ02880 1626 aa9.95□□□□□ -0.82
RAPGEF4-203ENST00000397087 WRNQ14191 1432 aaPredicted RBP eCLIP9.89□□□□□ -0.83
RAPGEF4-203ENST00000397087 ERICH3Q5RHP9 1530 aa9.86□□□□□ -0.83
RAPGEF4-203ENST00000397087 CFTRP13569 1480 aa9.84□□□□□ -0.83
RAPGEF4-203ENST00000397087 SYNJ1O43426 1573 aa9.83□□□□□ -0.84
RAPGEF4-203ENST00000397087 ABCC8Q09428 1581 aa9.77□□□□□ -0.84
RAPGEF4-203ENST00000397087 TNIKQ9UKE5 1360 aa9.77□□□□□ -0.85
RAPGEF4-203ENST00000397087 WDR97A6NE52 1622 aa9.77□□□□□ -0.85
RAPGEF4-203ENST00000397087 CEP164Q9UPV0 1460 aa9.76□□□□□ -0.85
RAPGEF4-203ENST00000397087 GOLGA3Q08378 1498 aa9.76□□□□□ -0.85
RAPGEF4-203ENST00000397087 TRIM41Q8WV44 630 aa9.75□□□□□ -0.85
RAPGEF4-203ENST00000397087 LAMC3Q9Y6N6 1575 aa9.74□□□□□ -0.85
RAPGEF4-203ENST00000397087 CC2D2AQ9P2K1 1620 aa9.72□□□□□ -0.85
RAPGEF4-203ENST00000397087 CUX1P39880 1505 aa9.69□□□□□ -0.86
RAPGEF4-203ENST00000397087 PRXQ9BXM0 1461 aa9.68□□□□□ -0.86
RAPGEF4-203ENST00000397087 DNMBPQ6XZF7 1577 aa9.68□□□□□ -0.86
RAPGEF4-203ENST00000397087 CUL7Q14999 1698 aa9.67□□□□□ -0.86
RAPGEF4-203ENST00000397087 MAP3K1Q13233 1512 aa9.66□□□□□ -0.86
RAPGEF4-203ENST00000397087 EHMT2Q96KQ7 1210 aa9.65□□□□□ -0.86
RAPGEF4-203ENST00000397087 KIF21AQ7Z4S6 1674 aa9.65□□□□□ -0.86
RAPGEF4-203ENST00000397087 CADPSQ9ULU8 1353 aa9.62□□□□□ -0.87
RAPGEF4-203ENST00000397087 TRIM26Q12899 539 aaPredicted RBP9.61□□□□□ -0.87
RAPGEF4-203ENST00000397087 CEP162Q5TB80 1403 aa9.6□□□□□ -0.87
RAPGEF4-203ENST00000397087 SOGA1O94964 1423 aa9.59□□□□□ -0.87
RAPGEF4-203ENST00000397087 ABCA10Q8WWZ4 1543 aa9.58□□□□□ -0.88
RAPGEF4-203ENST00000397087 ABCA5Q8WWZ7 1642 aa9.58□□□□□ -0.88
RAPGEF4-203ENST00000397087 PABPN1Q86U42 306 aaKnown RBP eCLIP9.58□□□□□ -0.88
RAPGEF4-203ENST00000397087 HRCP23327 699 aa9.57□□□□□ -0.88
RAPGEF4-203ENST00000397087 CTTNBP2Q8WZ74 1663 aa9.57□□□□□ -0.88
RAPGEF4-203ENST00000397087 KIF27Q86VH2 1401 aa9.56□□□□□ -0.88
RAPGEF4-203ENST00000397087 EFCAB5A4FU69 1503 aa9.56□□□□□ -0.88
RAPGEF4-203ENST00000397087 CSRNP3Q8WYN3 585 aa9.55□□□□□ -0.88
RAPGEF4-203ENST00000397087 CFAP43Q8NDM7 1665 aa9.54□□□□□ -0.88
RAPGEF4-203ENST00000397087 VPS8Q8N3P4 1428 aa9.54□□□□□ -0.88
RAPGEF4-203ENST00000397087 ZEB1P37275 1124 aaPredicted RBP9.54□□□□□ -0.88
RAPGEF4-203ENST00000397087 THOC2Q8NI27 1593 aaKnown RBP9.53□□□□□ -0.88
RAPGEF4-203ENST00000397087 AQRO60306 1485 aaKnown RBP eCLIP9.52□□□□□ -0.89
RAPGEF4-203ENST00000397087 PIAS4Q8N2W9 510 aaPredicted RBP9.51□□□□□ -0.89
RAPGEF4-203ENST00000397087 RUSC2Q8N2Y8 1516 aa9.51□□□□□ -0.89
RAPGEF4-203ENST00000397087 FANCD2Q9BXW9 1451 aa9.5□□□□□ -0.89
RAPGEF4-203ENST00000397087 PCGF6Q9BYE7 350 aa9.5□□□□□ -0.89
RAPGEF4-203ENST00000397087 TOPBP1Q92547 1522 aa9.49□□□□□ -0.89
RAPGEF4-203ENST00000397087 TARBP1Q13395 1621 aaKnown RBP9.48□□□□□ -0.89
RAPGEF4-203ENST00000397087 CUX2O14529 1486 aa9.48□□□□□ -0.89
RAPGEF4-203ENST00000397087 LOC105371045A0A1W2PR82 267 aa9.48□□□□□ -0.89
RAPGEF4-203ENST00000397087 SAMD9Q5K651 1589 aa9.48□□□□□ -0.89
RAPGEF4-203ENST00000397087 FGD5Q6ZNL6 1462 aa9.47□□□□□ -0.89
RAPGEF4-203ENST00000397087 RAPGEF2Q9Y4G8 1499 aa9.47□□□□□ -0.89
RAPGEF4-203ENST00000397087 ARAP1Q96P48 1450 aa9.46□□□□□ -0.89
RAPGEF4-203ENST00000397087 PBRM1Q86U86 1689 aa9.46□□□□□ -0.9
RAPGEF4-203ENST00000397087 CLIP1P30622 1438 aa9.45□□□□□ -0.9
RAPGEF4-203ENST00000397087 WDR62O43379 1518 aa9.44□□□□□ -0.9
RAPGEF4-203ENST00000397087 PDS5BQ9NTI5 1447 aa9.43□□□□□ -0.9
RAPGEF4-203ENST00000397087 FAM9AQ8IZU1 332 aaPredicted RBP9.42□□□□□ -0.9
RAPGEF4-203ENST00000397087 POLA1P09884 1462 aaPredicted RBP9.42□□□□□ -0.9
RAPGEF4-203ENST00000397087 URB2Q14146 1524 aaKnown RBP9.4□□□□□ -0.9
RAPGEF4-203ENST00000397087 TIAM1Q13009 1591 aa9.39□□□□□ -0.91
RAPGEF4-203ENST00000397087 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.39□□□□□ -0.91
RAPGEF4-203ENST00000397087 RRBP1Q9P2E9 1410 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms