RNA–Protein interactions for RNA: ENST00000395527.8

SPECC1-204, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPECC1, Length 3,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-204ENST00000395527 NISCHQ9Y2I1 1504 aa24.89■■□□□ 1.57
SPECC1-204ENST00000395527 DCAF8L2P0C7V8 631 aa22.07■■□□□ 1.12
SPECC1-204ENST00000395527 SHROOM4Q9ULL8 1493 aa21.46■■□□□ 1.03
SPECC1-204ENST00000395527 CCDC180Q9P1Z9 1646 aa21.16■□□□□ 0.98
SPECC1-204ENST00000395527 ABCC9O60706 1549 aa21.11■□□□□ 0.97
SPECC1-204ENST00000395527 SUPT5HO00267 1087 aaKnown RBP20.8■□□□□ 0.92
SPECC1-204ENST00000395527 ZCCHC6Q5VYS8 1495 aaKnown RBP20.78■□□□□ 0.92
SPECC1-204ENST00000395527 PABPN1Q86U42 306 aaKnown RBP eCLIP20.29■□□□□ 0.84
SPECC1-204ENST00000395527 SCRIBQ14160 1630 aa20.24■□□□□ 0.83
SPECC1-204ENST00000395527 DCAF1Q9Y4B6 1507 aa20.09■□□□□ 0.81
SPECC1-204ENST00000395527 NACADO15069 1562 aa20■□□□□ 0.79
SPECC1-204ENST00000395527 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
SPECC1-204ENST00000395527 MYO15BQ96JP2 1530 aa19.76■□□□□ 0.75
SPECC1-204ENST00000395527 CECR2Q9BXF3 1484 aa19.67■□□□□ 0.74
SPECC1-204ENST00000395527 RSF1Q96T23 1441 aaPredicted RBP19.53■□□□□ 0.72
SPECC1-204ENST00000395527 EHMT2Q96KQ7 1210 aa19.5■□□□□ 0.71
SPECC1-204ENST00000395527 MROH2BQ7Z745 1585 aa19.4■□□□□ 0.7
SPECC1-204ENST00000395527 CHIC1Q5VXU3 224 aa19.39■□□□□ 0.69
SPECC1-204ENST00000395527 FAM9AQ8IZU1 332 aaPredicted RBP19.38■□□□□ 0.69
SPECC1-204ENST00000395527 TRIM41Q8WV44 630 aa19.27■□□□□ 0.68
SPECC1-204ENST00000395527 UNC13AQ9UPW8 1703 aa19.25■□□□□ 0.67
SPECC1-204ENST00000395527 BICRAQ9NZM4 1560 aa19.25■□□□□ 0.67
SPECC1-204ENST00000395527 WIZO95785 1651 aa19.2■□□□□ 0.66
SPECC1-204ENST00000395527 BAZ1AQ9NRL2 1556 aaPredicted RBP19.19■□□□□ 0.66
SPECC1-204ENST00000395527 LOC105371045A0A1W2PR82 267 aa19.05■□□□□ 0.64
SPECC1-204ENST00000395527 SMARCA4P51532 1647 aa19.04■□□□□ 0.64
SPECC1-204ENST00000395527 BAZ1BQ9UIG0 1483 aaKnown RBP18.96■□□□□ 0.63
SPECC1-204ENST00000395527 ATAD2BQ9ULI0 1458 aa18.92■□□□□ 0.62
SPECC1-204ENST00000395527 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
SPECC1-204ENST00000395527 EIF4G1Q04637 1599 aaKnown RBP18.85■□□□□ 0.61
SPECC1-204ENST00000395527 DNAJC5BQ9UF47 199 aa18.84■□□□□ 0.61
SPECC1-204ENST00000395527 RANGAP1P46060 587 aaPredicted RBP18.81■□□□□ 0.6
SPECC1-204ENST00000395527 TOP2AP11388 1531 aaKnown RBP18.8■□□□□ 0.6
SPECC1-204ENST00000395527 SMARCA2P51531 1590 aa18.75■□□□□ 0.59
SPECC1-204ENST00000395527 ABCC8Q09428 1581 aa18.67■□□□□ 0.58
SPECC1-204ENST00000395527 UBTFP17480 764 aaKnown RBP18.64■□□□□ 0.57
SPECC1-204ENST00000395527 CC2D2AQ9P2K1 1620 aa18.62■□□□□ 0.57
SPECC1-204ENST00000395527 NCAPD3P42695 1498 aa18.61■□□□□ 0.57
SPECC1-204ENST00000395527 TTBK1Q5TCY1 1321 aaPredicted RBP18.59■□□□□ 0.57
SPECC1-204ENST00000395527 PPARGC1BQ86YN6 1023 aaKnown RBP18.56■□□□□ 0.56
SPECC1-204ENST00000395527 WRNQ14191 1432 aaPredicted RBP eCLIP18.51■□□□□ 0.55
SPECC1-204ENST00000395527 PEG3Q9GZU2 1588 aa18.46■□□□□ 0.55
SPECC1-204ENST00000395527 SOGA1O94964 1423 aa18.44■□□□□ 0.54
SPECC1-204ENST00000395527 CSRNP3Q8WYN3 585 aa18.43■□□□□ 0.54
SPECC1-204ENST00000395527 CADPSQ9ULU8 1353 aa18.42■□□□□ 0.54
SPECC1-204ENST00000395527 NESP48681 1621 aa18.41■□□□□ 0.54
SPECC1-204ENST00000395527 HMGXB3Q12766 1538 aa18.37■□□□□ 0.53
SPECC1-204ENST00000395527 PCGF6Q9BYE7 350 aa18.34■□□□□ 0.53
SPECC1-204ENST00000395527 RUSC2Q8N2Y8 1516 aa18.33■□□□□ 0.53
SPECC1-204ENST00000395527 CFTRP13569 1480 aa18.25■□□□□ 0.51
SPECC1-204ENST00000395527 FANCD2Q9BXW9 1451 aa18.22■□□□□ 0.51
SPECC1-204ENST00000395527 ATP1B4Q9UN42 357 aaPredicted RBP18.21■□□□□ 0.51
SPECC1-204ENST00000395527 SYNJ1O43426 1573 aa18.19■□□□□ 0.5
SPECC1-204ENST00000395527 FBLN2P98095 1184 aa18.14■□□□□ 0.49
SPECC1-204ENST00000395527 P3H3Q8IVL6 736 aa18.14■□□□□ 0.49
SPECC1-204ENST00000395527 ERCC6Q03468 1493 aa18.13■□□□□ 0.49
SPECC1-204ENST00000395527 PDS5BQ9NTI5 1447 aa18.12■□□□□ 0.49
SPECC1-204ENST00000395527 CUX2O14529 1486 aa18.1■□□□□ 0.49
SPECC1-204ENST00000395527 TDRD9Q8NDG6 1382 aaKnown RBP18.1■□□□□ 0.49
SPECC1-204ENST00000395527 APLP2Q06481 763 aa18.1■□□□□ 0.49
SPECC1-204ENST00000395527 CUX1P39880 1505 aa18.07■□□□□ 0.48
SPECC1-204ENST00000395527 CEP164Q9UPV0 1460 aa18.07■□□□□ 0.48
SPECC1-204ENST00000395527 RAD54L2Q9Y4B4 1467 aa18.06■□□□□ 0.48
SPECC1-204ENST00000395527 KIF27Q86VH2 1401 aa18.05■□□□□ 0.48
SPECC1-204ENST00000395527 FGD5Q6ZNL6 1462 aa18.02■□□□□ 0.48
SPECC1-204ENST00000395527 EEA1Q15075 1411 aa17.97■□□□□ 0.47
SPECC1-204ENST00000395527 RAPGEF2Q9Y4G8 1499 aa17.95■□□□□ 0.46
SPECC1-204ENST00000395527 CEP162Q5TB80 1403 aa17.95■□□□□ 0.46
SPECC1-204ENST00000395527 GOLGA3Q08378 1498 aa17.94■□□□□ 0.46
SPECC1-204ENST00000395527 TOP2BQ02880 1626 aa17.93■□□□□ 0.46
SPECC1-204ENST00000395527 ARID3CA6NKF2 412 aa17.92■□□□□ 0.46
SPECC1-204ENST00000395527 TOPBP1Q92547 1522 aa17.91■□□□□ 0.46
SPECC1-204ENST00000395527 CARMIL1Q5VZK9 1371 aa17.9■□□□□ 0.46
SPECC1-204ENST00000395527 TRIM26Q12899 539 aaPredicted RBP17.89■□□□□ 0.45
SPECC1-204ENST00000395527 TNIKQ9UKE5 1360 aa17.88■□□□□ 0.45
SPECC1-204ENST00000395527 POLA1P09884 1462 aaPredicted RBP17.87■□□□□ 0.45
SPECC1-204ENST00000395527 IGF1RP08069 1367 aa17.87■□□□□ 0.45
SPECC1-204ENST00000395527 CLIP1P30622 1438 aa17.87■□□□□ 0.45
SPECC1-204ENST00000395527 URB2Q14146 1524 aaKnown RBP17.86■□□□□ 0.45
SPECC1-204ENST00000395527 LAMC3Q9Y6N6 1575 aa17.86■□□□□ 0.45
SPECC1-204ENST00000395527 AQRO60306 1485 aaKnown RBP eCLIP17.84■□□□□ 0.45
SPECC1-204ENST00000395527 CHMP7Q8WUX9 453 aaPredicted RBP17.82■□□□□ 0.44
SPECC1-204ENST00000395527 ITGAEP38570 1179 aa17.78■□□□□ 0.44
SPECC1-204ENST00000395527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.78■□□□□ 0.44
SPECC1-204ENST00000395527 HNRNPUL2Q1KMD3 747 aaKnown RBP17.78■□□□□ 0.44
SPECC1-204ENST00000395527 DNMBPQ6XZF7 1577 aa17.76■□□□□ 0.43
SPECC1-204ENST00000395527 MRC2Q9UBG0 1479 aa17.74■□□□□ 0.43
SPECC1-204ENST00000395527 KIF21AQ7Z4S6 1674 aa17.73■□□□□ 0.43
SPECC1-204ENST00000395527 BIVM-ERCC5R4GMW8 1640 aa17.72■□□□□ 0.43
SPECC1-204ENST00000395527 GAPVD1Q14C86 1478 aa17.71■□□□□ 0.43
SPECC1-204ENST00000395527 ZNF608Q9ULD9 1512 aaPredicted RBP17.67■□□□□ 0.42
SPECC1-204ENST00000395527 PRXQ9BXM0 1461 aa17.66■□□□□ 0.42
SPECC1-204ENST00000395527 ABCA10Q8WWZ4 1543 aa17.61■□□□□ 0.41
SPECC1-204ENST00000395527 KANK4Q5T7N3 995 aaPredicted RBP17.59■□□□□ 0.41
SPECC1-204ENST00000395527 CCER1Q8TC90 406 aaPredicted RBP17.57■□□□□ 0.4
SPECC1-204ENST00000395527 FHOD3Q2V2M9 1422 aa17.56■□□□□ 0.4
SPECC1-204ENST00000395527 PRDM2Q13029 1718 aa17.56■□□□□ 0.4
SPECC1-204ENST00000395527 KIF21BO75037 1637 aa17.55■□□□□ 0.4
SPECC1-204ENST00000395527 FAM50AQ14320 339 aaKnown RBP17.54■□□□□ 0.4
SPECC1-204ENST00000395527 VPS8Q8N3P4 1428 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms