RNA–Protein interactions for RNA: ENST00000393415.7

MDM2-211, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5

Gene MDM2, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-211ENST00000393415 AEBP2Q6ZN18 517 aaPredicted RBP19.54■□□□□ 0.72
MDM2-211ENST00000393415 CHIC1Q5VXU3 224 aa18.43■□□□□ 0.54
MDM2-211ENST00000393415 SENP3Q9H4L4 574 aaPredicted RBP16.87■□□□□ 0.29
MDM2-211ENST00000393415 PHF23Q9BUL5 403 aaPredicted RBP16.53■□□□□ 0.24
MDM2-211ENST00000393415 NISCHQ9Y2I1 1504 aa16.27■□□□□ 0.2
MDM2-211ENST00000393415 ABCC9O60706 1549 aa16.04■□□□□ 0.16
MDM2-211ENST00000393415 DNAJC5BQ9UF47 199 aa16.03■□□□□ 0.16
MDM2-211ENST00000393415 FOXD1Q16676 465 aa15.67■□□□□ 0.1
MDM2-211ENST00000393415 DNAJC5Q9H3Z4 198 aa15.49■□□□□ 0.07
MDM2-211ENST00000393415 POTEDQ86YR6 584 aa15.06■□□□□ 0
MDM2-211ENST00000393415 CCDC180Q9P1Z9 1646 aa15.02□□□□□ -0.01
MDM2-211ENST00000393415 MSH5O43196 834 aa14.91□□□□□ -0.02
MDM2-211ENST00000393415 RB1CC1Q8TDY2 1594 aa14.81□□□□□ -0.04
MDM2-211ENST00000393415 PABPN1Q86U42 306 aaKnown RBP eCLIP14.79□□□□□ -0.04
MDM2-211ENST00000393415 PIAS4Q8N2W9 510 aaPredicted RBP14.65□□□□□ -0.06
MDM2-211ENST00000393415 CECR2Q9BXF3 1484 aa14.57□□□□□ -0.08
MDM2-211ENST00000393415 PLPPR3Q6T4P5 718 aa14.52□□□□□ -0.09
MDM2-211ENST00000393415 NACADO15069 1562 aa14.47□□□□□ -0.09
MDM2-211ENST00000393415 UNC13AQ9UPW8 1703 aa14.44□□□□□ -0.1
MDM2-211ENST00000393415 CC2D2AQ9P2K1 1620 aa14.44□□□□□ -0.1
MDM2-211ENST00000393415 BICRAQ9NZM4 1560 aa14.43□□□□□ -0.1
MDM2-211ENST00000393415 TRIM41Q8WV44 630 aa14.33□□□□□ -0.12
MDM2-211ENST00000393415 PPP6R1Q9UPN7 881 aa14.33□□□□□ -0.12
MDM2-211ENST00000393415 ADRA2BP18089 450 aa14.32□□□□□ -0.12
MDM2-211ENST00000393415 CUX2O14529 1486 aa14.26□□□□□ -0.13
MDM2-211ENST00000393415 DCAF8L2P0C7V8 631 aa14.18□□□□□ -0.14
MDM2-211ENST00000393415 EIF4G1Q04637 1599 aaKnown RBP14.16□□□□□ -0.14
MDM2-211ENST00000393415 SHROOM4Q9ULL8 1493 aa14.13□□□□□ -0.15
MDM2-211ENST00000393415 MYO15BQ96JP2 1530 aa13.95□□□□□ -0.18
MDM2-211ENST00000393415 ERCC6Q03468 1493 aa13.92□□□□□ -0.18
MDM2-211ENST00000393415 SCRIBQ14160 1630 aa13.65□□□□□ -0.22
MDM2-211ENST00000393415 THOC2Q8NI27 1593 aaKnown RBP13.54□□□□□ -0.24
MDM2-211ENST00000393415 NESP48681 1621 aa13.49□□□□□ -0.25
MDM2-211ENST00000393415 OSCARQ8IYS5 282 aa13.47□□□□□ -0.25
MDM2-211ENST00000393415 ILDR1Q86SU0 546 aaPredicted RBP13.42□□□□□ -0.26
MDM2-211ENST00000393415 NCAPD3P42695 1498 aa13.4□□□□□ -0.26
MDM2-211ENST00000393415 BAZ1AQ9NRL2 1556 aaPredicted RBP13.4□□□□□ -0.26
MDM2-211ENST00000393415 TRHP20396 242 aaPredicted RBP13.39□□□□□ -0.27
MDM2-211ENST00000393415 DCAF1Q9Y4B6 1507 aa13.38□□□□□ -0.27
MDM2-211ENST00000393415 RIMBP3CA6NJZ7 1639 aa13.36□□□□□ -0.27
MDM2-211ENST00000393415 RIMBP3BA6NNM3 1639 aa13.36□□□□□ -0.27
MDM2-211ENST00000393415 RIMBP3Q9UFD9 1639 aa13.36□□□□□ -0.27
MDM2-211ENST00000393415 SMARCA2P51531 1590 aa13.34□□□□□ -0.27
MDM2-211ENST00000393415 DMRT2Q9Y5R5 561 aa13.28□□□□□ -0.28
MDM2-211ENST00000393415 KIF21AQ7Z4S6 1674 aa13.25□□□□□ -0.29
MDM2-211ENST00000393415 ZCCHC6Q5VYS8 1495 aaKnown RBP13.24□□□□□ -0.29
MDM2-211ENST00000393415 SCAF1Q9H7N4 1312 aaKnown RBP13.23□□□□□ -0.29
MDM2-211ENST00000393415 LAMC3Q9Y6N6 1575 aa13.23□□□□□ -0.29
MDM2-211ENST00000393415 ARHGEF11O15085 1522 aa13.23□□□□□ -0.29
MDM2-211ENST00000393415 MAPK8IP2Q13387 824 aaPredicted RBP13.22□□□□□ -0.29
MDM2-211ENST00000393415 CYB5RLQ6IPT4 315 aa13.22□□□□□ -0.29
MDM2-211ENST00000393415 PDS5BQ9NTI5 1447 aa13.21□□□□□ -0.3
MDM2-211ENST00000393415 ATAD2BQ9ULI0 1458 aa13.19□□□□□ -0.3
MDM2-211ENST00000393415 HMGXB3Q12766 1538 aa13.16□□□□□ -0.3
MDM2-211ENST00000393415 WDR62O43379 1518 aa13.14□□□□□ -0.31
MDM2-211ENST00000393415 MRC2Q9UBG0 1479 aa13.14□□□□□ -0.31
MDM2-211ENST00000393415 ARAP1Q96P48 1450 aa13.03□□□□□ -0.32
MDM2-211ENST00000393415 CACNB1Q02641 598 aaPredicted RBP13.01□□□□□ -0.33
MDM2-211ENST00000393415 BAZ1BQ9UIG0 1483 aaKnown RBP12.98□□□□□ -0.33
MDM2-211ENST00000393415 CADPSQ9ULU8 1353 aa12.94□□□□□ -0.34
MDM2-211ENST00000393415 SMARCA4P51532 1647 aa12.88□□□□□ -0.35
MDM2-211ENST00000393415 CEP164Q9UPV0 1460 aa12.87□□□□□ -0.35
MDM2-211ENST00000393415 DCAF8L1A6NGE4 600 aa12.85□□□□□ -0.35
MDM2-211ENST00000393415 RSF1Q96T23 1441 aaPredicted RBP12.83□□□□□ -0.36
MDM2-211ENST00000393415 PEG3Q9GZU2 1588 aa12.79□□□□□ -0.36
MDM2-211ENST00000393415 FANCD2Q9BXW9 1451 aa12.77□□□□□ -0.37
MDM2-211ENST00000393415 KDM4FA0A1W2PPD8 638 aa12.76□□□□□ -0.37
MDM2-211ENST00000393415 ZNF608Q9ULD9 1512 aaPredicted RBP12.75□□□□□ -0.37
MDM2-211ENST00000393415 URB2Q14146 1524 aaKnown RBP12.73□□□□□ -0.37
MDM2-211ENST00000393415 CHD1O14646 1710 aa12.68□□□□□ -0.38
MDM2-211ENST00000393415 FBXO41Q8TF61 875 aa12.68□□□□□ -0.38
MDM2-211ENST00000393415 IFT140Q96RY7 1462 aa12.66□□□□□ -0.38
MDM2-211ENST00000393415 LMTK3Q96Q04 1460 aa12.65□□□□□ -0.38
MDM2-211ENST00000393415 PPP4R3CPQ6ZMV5 832 aa12.64□□□□□ -0.39
MDM2-211ENST00000393415 FBLN2P98095 1184 aa12.63□□□□□ -0.39
MDM2-211ENST00000393415 ERCC6L2Q5T890 1561 aa12.62□□□□□ -0.39
MDM2-211ENST00000393415 SOCS7O14512 581 aa12.62□□□□□ -0.39
MDM2-211ENST00000393415 HOXD11P31277 338 aaPredicted RBP12.62□□□□□ -0.39
MDM2-211ENST00000393415 RNF39Q9H2S5 420 aa12.62□□□□□ -0.39
MDM2-211ENST00000393415 EIF4G3O43432 1585 aaKnown RBP12.6□□□□□ -0.39
MDM2-211ENST00000393415 CFTRP13569 1480 aa12.57□□□□□ -0.4
MDM2-211ENST00000393415 CLASP1Q7Z460 1538 aa12.55□□□□□ -0.4
MDM2-211ENST00000393415 HECW2Q9P2P5 1572 aa12.52□□□□□ -0.4
MDM2-211ENST00000393415 MROH2BQ7Z745 1585 aa12.52□□□□□ -0.41
MDM2-211ENST00000393415 ILDR2Q71H61 639 aa12.51□□□□□ -0.41
MDM2-211ENST00000393415 CNKSR2Q8WXI2 1034 aa12.51□□□□□ -0.41
MDM2-211ENST00000393415 AQRO60306 1485 aaKnown RBP eCLIP12.51□□□□□ -0.418e-7■■■■□ 20
MDM2-211ENST00000393415 GAPVD1Q14C86 1478 aa12.51□□□□□ -0.41
MDM2-211ENST00000393415 RNF216Q9NWF9 866 aaPredicted RBP12.48□□□□□ -0.41
MDM2-211ENST00000393415 KIF13AQ9H1H9 1805 aa12.47□□□□□ -0.41
MDM2-211ENST00000393415 C1QBPQ07021 282 aaKnown RBP12.47□□□□□ -0.41
MDM2-211ENST00000393415 SYNJ1O43426 1573 aa12.43□□□□□ -0.42
MDM2-211ENST00000393415 TOPBP1Q92547 1522 aa12.41□□□□□ -0.42
MDM2-211ENST00000393415 SYNJ2O15056 1496 aa12.39□□□□□ -0.43
MDM2-211ENST00000393415 CHMP7Q8WUX9 453 aaPredicted RBP12.38□□□□□ -0.43
MDM2-211ENST00000393415 TARBP1Q13395 1621 aaKnown RBP12.37□□□□□ -0.43
MDM2-211ENST00000393415 ADGRL1O94910 1474 aa12.37□□□□□ -0.43
MDM2-211ENST00000393415 KDM6BO15054 1643 aa12.37□□□□□ -0.43
MDM2-211ENST00000393415 DISP3Q9P2K9 1392 aa12.36□□□□□ -0.43
MDM2-211ENST00000393415 FAM69CQ0P6D2 419 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms