RNA–Protein interactions for RNA: ENST00000384281.1

SNORA54-201, Transcript of small nucleolar RNA, H/ACA box 54, humanhuman

BASIC

Gene SNORA54, Length 123 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA54-201ENST00000384281 NISCHQ9Y2I1 1504 aa7.88□□□□□ -1.15
SNORA54-201ENST00000384281 DNAJC5BQ9UF47 199 aa7.22□□□□□ -1.25
SNORA54-201ENST00000384281 DNAJC5Q9H3Z4 198 aa7.17□□□□□ -1.26
SNORA54-201ENST00000384281 ABCC9O60706 1549 aa7.08□□□□□ -1.28
SNORA54-201ENST00000384281 CCDC180Q9P1Z9 1646 aa7.06□□□□□ -1.28
SNORA54-201ENST00000384281 ZCCHC6Q5VYS8 1495 aaKnown RBP6.62□□□□□ -1.35
SNORA54-201ENST00000384281 TRIM41Q8WV44 630 aa6.58□□□□□ -1.36
SNORA54-201ENST00000384281 MYO15BQ96JP2 1530 aa6.56□□□□□ -1.36
SNORA54-201ENST00000384281 UNC13AQ9UPW8 1703 aa6.56□□□□□ -1.36
SNORA54-201ENST00000384281 NACADO15069 1562 aa6.55□□□□□ -1.36
SNORA54-201ENST00000384281 DCAF1Q9Y4B6 1507 aa6.55□□□□□ -1.36
SNORA54-201ENST00000384281 RB1CC1Q8TDY2 1594 aa6.53□□□□□ -1.36
SNORA54-201ENST00000384281 BICRAQ9NZM4 1560 aa6.48□□□□□ -1.37
SNORA54-201ENST00000384281 CECR2Q9BXF3 1484 aa6.45□□□□□ -1.38
SNORA54-201ENST00000384281 CC2D2AQ9P2K1 1620 aa6.43□□□□□ -1.38
SNORA54-201ENST00000384281 CUX2O14529 1486 aa6.41□□□□□ -1.38
SNORA54-201ENST00000384281 SCRIBQ14160 1630 aa6.41□□□□□ -1.38
SNORA54-201ENST00000384281 AEBP2Q6ZN18 517 aaPredicted RBP6.41□□□□□ -1.38
SNORA54-201ENST00000384281 PABPN1Q86U42 306 aaKnown RBP eCLIP6.41□□□□□ -1.38
SNORA54-201ENST00000384281 SHROOM4Q9ULL8 1493 aa6.32□□□□□ -1.4
SNORA54-201ENST00000384281 ILDR1Q86SU0 546 aaPredicted RBP6.3□□□□□ -1.4
SNORA54-201ENST00000384281 DCAF8L2P0C7V8 631 aa6.26□□□□□ -1.41
SNORA54-201ENST00000384281 EIF4G1Q04637 1599 aaKnown RBP6.23□□□□□ -1.41
SNORA54-201ENST00000384281 ERCC6Q03468 1493 aa6.18□□□□□ -1.42
SNORA54-201ENST00000384281 SMARCA4P51532 1647 aa6.14□□□□□ -1.43
SNORA54-201ENST00000384281 PEG3Q9GZU2 1588 aa6.11□□□□□ -1.43
SNORA54-201ENST00000384281 MROH2BQ7Z745 1585 aa6.1□□□□□ -1.43
SNORA54-201ENST00000384281 BAZ1AQ9NRL2 1556 aaPredicted RBP6.08□□□□□ -1.44
SNORA54-201ENST00000384281 HMGXB3Q12766 1538 aa6.07□□□□□ -1.44
SNORA54-201ENST00000384281 RIMBP3CA6NJZ7 1639 aa6.07□□□□□ -1.44
SNORA54-201ENST00000384281 RIMBP3BA6NNM3 1639 aa6.07□□□□□ -1.44
SNORA54-201ENST00000384281 RIMBP3Q9UFD9 1639 aa6.07□□□□□ -1.44
SNORA54-201ENST00000384281 ATAD2BQ9ULI0 1458 aa6.05□□□□□ -1.44
SNORA54-201ENST00000384281 THOC2Q8NI27 1593 aaKnown RBP6.05□□□□□ -1.44
SNORA54-201ENST00000384281 WIZO95785 1651 aa6.04□□□□□ -1.44
SNORA54-201ENST00000384281 TRHP20396 242 aaPredicted RBP6.04□□□□□ -1.44
SNORA54-201ENST00000384281 NCAPD3P42695 1498 aa6.03□□□□□ -1.44
SNORA54-201ENST00000384281 SMARCA2P51531 1590 aa6.02□□□□□ -1.45
SNORA54-201ENST00000384281 RSF1Q96T23 1441 aaPredicted RBP5.99□□□□□ -1.45
SNORA54-201ENST00000384281 BAZ1BQ9UIG0 1483 aaKnown RBP5.96□□□□□ -1.45
SNORA54-201ENST00000384281 TOP2AP11388 1531 aaKnown RBP5.96□□□□□ -1.46
SNORA54-201ENST00000384281 LMTK3Q96Q04 1460 aa5.95□□□□□ -1.46
SNORA54-201ENST00000384281 OSCARQ8IYS5 282 aa5.93□□□□□ -1.46
SNORA54-201ENST00000384281 NESP48681 1621 aa5.92□□□□□ -1.46
SNORA54-201ENST00000384281 ARHGEF11O15085 1522 aa5.92□□□□□ -1.46
SNORA54-201ENST00000384281 KIF21AQ7Z4S6 1674 aa5.91□□□□□ -1.46
SNORA54-201ENST00000384281 SOCS7O14512 581 aa5.91□□□□□ -1.46
SNORA54-201ENST00000384281 PRDM2Q13029 1718 aa5.91□□□□□ -1.46
SNORA54-201ENST00000384281 LAMC3Q9Y6N6 1575 aa5.89□□□□□ -1.47
SNORA54-201ENST00000384281 ERCC6L2Q5T890 1561 aa5.86□□□□□ -1.47
SNORA54-201ENST00000384281 CCDC88BA6NC98 1476 aa5.84□□□□□ -1.47
SNORA54-201ENST00000384281 CFTRP13569 1480 aa5.84□□□□□ -1.47
SNORA54-201ENST00000384281 CYB5RLQ6IPT4 315 aa5.84□□□□□ -1.47
SNORA54-201ENST00000384281 ILDR2Q71H61 639 aa5.82□□□□□ -1.48
SNORA54-201ENST00000384281 FBXO41Q8TF61 875 aa5.82□□□□□ -1.48
SNORA54-201ENST00000384281 WDR62O43379 1518 aa5.82□□□□□ -1.48
SNORA54-201ENST00000384281 CADPSQ9ULU8 1353 aa5.8□□□□□ -1.48
SNORA54-201ENST00000384281 ARAP1Q96P48 1450 aa5.8□□□□□ -1.48
SNORA54-201ENST00000384281 URB2Q14146 1524 aaKnown RBP5.79□□□□□ -1.48
SNORA54-201ENST00000384281 FANCD2Q9BXW9 1451 aa5.77□□□□□ -1.49
SNORA54-201ENST00000384281 HECW2Q9P2P5 1572 aa5.77□□□□□ -1.49
SNORA54-201ENST00000384281 MRC2Q9UBG0 1479 aa5.77□□□□□ -1.49
SNORA54-201ENST00000384281 CEP164Q9UPV0 1460 aa5.76□□□□□ -1.49
SNORA54-201ENST00000384281 WDR97A6NE52 1622 aa5.75□□□□□ -1.49
SNORA54-201ENST00000384281 DISP3Q9P2K9 1392 aa5.74□□□□□ -1.49
SNORA54-201ENST00000384281 CUX1P39880 1505 aa5.74□□□□□ -1.49
SNORA54-201ENST00000384281 PDS5BQ9NTI5 1447 aa5.74□□□□□ -1.49
SNORA54-201ENST00000384281 DNMBPQ6XZF7 1577 aa5.73□□□□□ -1.49
SNORA54-201ENST00000384281 TARBP1Q13395 1621 aaKnown RBP5.73□□□□□ -1.49
SNORA54-201ENST00000384281 TOPBP1Q92547 1522 aa5.73□□□□□ -1.49
SNORA54-201ENST00000384281 KDM4FA0A1W2PPD8 638 aa5.72□□□□□ -1.49
SNORA54-201ENST00000384281 BIVM-ERCC5R4GMW8 1640 aa5.71□□□□□ -1.5
SNORA54-201ENST00000384281 SYNJ1O43426 1573 aa5.71□□□□□ -1.5
SNORA54-201ENST00000384281 KIF13AQ9H1H9 1805 aa5.69□□□□□ -1.5
SNORA54-201ENST00000384281 CHD1O14646 1710 aa5.69□□□□□ -1.5
SNORA54-201ENST00000384281 EIF4G3O43432 1585 aaKnown RBP5.69□□□□□ -1.5
SNORA54-201ENST00000384281 ABCC8Q09428 1581 aa5.69□□□□□ -1.5
SNORA54-201ENST00000384281 SPATA31D1Q6ZQQ2 1576 aa5.69□□□□□ -1.5
SNORA54-201ENST00000384281 POLA1P09884 1462 aaPredicted RBP5.68□□□□□ -1.5
SNORA54-201ENST00000384281 TOP2BQ02880 1626 aa5.67□□□□□ -1.5
SNORA54-201ENST00000384281 ZNF608Q9ULD9 1512 aaPredicted RBP5.67□□□□□ -1.5
SNORA54-201ENST00000384281 ABCA5Q8WWZ7 1642 aa5.66□□□□□ -1.5
SNORA54-201ENST00000384281 FGD5Q6ZNL6 1462 aa5.65□□□□□ -1.5
SNORA54-201ENST00000384281 SUPT5HO00267 1087 aaKnown RBP5.65□□□□□ -1.5
SNORA54-201ENST00000384281 PBRM1Q86U86 1689 aa5.64□□□□□ -1.51
SNORA54-201ENST00000384281 IFT140Q96RY7 1462 aa5.63□□□□□ -1.51
SNORA54-201ENST00000384281 RAD54L2Q9Y4B4 1467 aa5.63□□□□□ -1.51
SNORA54-201ENST00000384281 SYNJ2O15056 1496 aa5.62□□□□□ -1.51
SNORA54-201ENST00000384281 ABCA10Q8WWZ4 1543 aa5.61□□□□□ -1.51
SNORA54-201ENST00000384281 WRNQ14191 1432 aaPredicted RBP eCLIP5.6□□□□□ -1.51
SNORA54-201ENST00000384281 ADAMTS12P58397 1594 aa5.59□□□□□ -1.51
SNORA54-201ENST00000384281 KDM6BO15054 1643 aa5.57□□□□□ -1.52
SNORA54-201ENST00000384281 CLASP1Q7Z460 1538 aa5.57□□□□□ -1.52
SNORA54-201ENST00000384281 AQRO60306 1485 aaKnown RBP eCLIP5.57□□□□□ -1.52
SNORA54-201ENST00000384281 ADGRL1O94910 1474 aa5.57□□□□□ -1.52
SNORA54-201ENST00000384281 SNAPC4Q5SXM2 1469 aa5.57□□□□□ -1.52
SNORA54-201ENST00000384281 SOGA1O94964 1423 aa5.55□□□□□ -1.52
SNORA54-201ENST00000384281 CEP170Q5SW79 1584 aa5.54□□□□□ -1.52
SNORA54-201ENST00000384281 TDRD9Q8NDG6 1382 aaKnown RBP5.54□□□□□ -1.52
SNORA54-201ENST00000384281 TSPOAP1O95153 1857 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms