RNA–Protein interactions for RNA: ENST00000381728.5

RCL1-201, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 3 BASIC

Gene RCL1, Length 758 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-201ENST00000381728 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
RCL1-201ENST00000381728 AEBP2Q6ZN18 517 aaPredicted RBP20.73■□□□□ 0.91
RCL1-201ENST00000381728 NISCHQ9Y2I1 1504 aa20.47■□□□□ 0.87
RCL1-201ENST00000381728 PHF23Q9BUL5 403 aaPredicted RBP18.48■□□□□ 0.55
RCL1-201ENST00000381728 CCDC180Q9P1Z9 1646 aa18.18■□□□□ 0.5
RCL1-201ENST00000381728 ABCC9O60706 1549 aa18.08■□□□□ 0.48
RCL1-201ENST00000381728 SENP3Q9H4L4 574 aaPredicted RBP17.39■□□□□ 0.37
RCL1-201ENST00000381728 DNAJC5BQ9UF47 199 aa17.31■□□□□ 0.36
RCL1-201ENST00000381728 PLPPR3Q6T4P5 718 aa17.21■□□□□ 0.35
RCL1-201ENST00000381728 MYO15BQ96JP2 1530 aa17.14■□□□□ 0.33
RCL1-201ENST00000381728 DCAF1Q9Y4B6 1507 aa17.13■□□□□ 0.33
RCL1-201ENST00000381728 ZCCHC6Q5VYS8 1495 aaKnown RBP17.12■□□□□ 0.33
RCL1-201ENST00000381728 RB1CC1Q8TDY2 1594 aa17.02■□□□□ 0.31
RCL1-201ENST00000381728 NACADO15069 1562 aa17.01■□□□□ 0.31
RCL1-201ENST00000381728 UNC13AQ9UPW8 1703 aa16.82■□□□□ 0.28
RCL1-201ENST00000381728 DCAF8L2P0C7V8 631 aa16.68■□□□□ 0.26
RCL1-201ENST00000381728 PABPN1Q86U42 306 aaKnown RBP eCLIP16.67■□□□□ 0.26
RCL1-201ENST00000381728 BICRAQ9NZM4 1560 aa16.59■□□□□ 0.25
RCL1-201ENST00000381728 SHROOM4Q9ULL8 1493 aa16.44■□□□□ 0.22
RCL1-201ENST00000381728 CC2D2AQ9P2K1 1620 aa16.36■□□□□ 0.21
RCL1-201ENST00000381728 SCRIBQ14160 1630 aa16.34■□□□□ 0.21
RCL1-201ENST00000381728 CECR2Q9BXF3 1484 aa16.32■□□□□ 0.2
RCL1-201ENST00000381728 EIF4G1Q04637 1599 aaKnown RBP16.2■□□□□ 0.18
RCL1-201ENST00000381728 DNAJC5Q9H3Z4 198 aa16.19■□□□□ 0.18
RCL1-201ENST00000381728 ADRA2BP18089 450 aa16.16■□□□□ 0.18
RCL1-201ENST00000381728 FOXD1Q16676 465 aa16.11■□□□□ 0.17
RCL1-201ENST00000381728 PPP6R1Q9UPN7 881 aa16.07■□□□□ 0.16
RCL1-201ENST00000381728 BAZ1AQ9NRL2 1556 aaPredicted RBP15.9■□□□□ 0.14
RCL1-201ENST00000381728 SMARCA4P51532 1647 aa15.79■□□□□ 0.12
RCL1-201ENST00000381728 PEG3Q9GZU2 1588 aa15.77■□□□□ 0.11
RCL1-201ENST00000381728 CUX2O14529 1486 aa15.77■□□□□ 0.11
RCL1-201ENST00000381728 KCNA4P22459 653 aa15.73■□□□□ 0.11
RCL1-201ENST00000381728 SMARCA2P51531 1590 aa15.73■□□□□ 0.11
RCL1-201ENST00000381728 MROH2BQ7Z745 1585 aa15.66■□□□□ 0.1
RCL1-201ENST00000381728 NCAPD3P42695 1498 aa15.65■□□□□ 0.1
RCL1-201ENST00000381728 RSF1Q96T23 1441 aaPredicted RBP15.65■□□□□ 0.1
RCL1-201ENST00000381728 HMGXB3Q12766 1538 aa15.63■□□□□ 0.09
RCL1-201ENST00000381728 ERCC6Q03468 1493 aa15.62■□□□□ 0.09
RCL1-201ENST00000381728 ATAD2BQ9ULI0 1458 aa15.62■□□□□ 0.09
RCL1-201ENST00000381728 BAZ1BQ9UIG0 1483 aaKnown RBP15.51■□□□□ 0.07
RCL1-201ENST00000381728 WIZO95785 1651 aa15.49■□□□□ 0.07
RCL1-201ENST00000381728 TOP2AP11388 1531 aaKnown RBP15.48■□□□□ 0.07
RCL1-201ENST00000381728 THOC2Q8NI27 1593 aaKnown RBP15.45■□□□□ 0.06
RCL1-201ENST00000381728 EHMT2Q96KQ7 1210 aa15.42■□□□□ 0.06
RCL1-201ENST00000381728 NESP48681 1621 aa15.42■□□□□ 0.06
RCL1-201ENST00000381728 TRIM41Q8WV44 630 aa15.32■□□□□ 0.04
RCL1-201ENST00000381728 KIF21AQ7Z4S6 1674 aa15.32■□□□□ 0.04
RCL1-201ENST00000381728 SUPT5HO00267 1087 aaKnown RBP15.3■□□□□ 0.04
RCL1-201ENST00000381728 PIAS4Q8N2W9 510 aaPredicted RBP15.3■□□□□ 0.04
RCL1-201ENST00000381728 PPP4R3CPQ6ZMV5 832 aa15.27■□□□□ 0.04
RCL1-201ENST00000381728 LAMC3Q9Y6N6 1575 aa15.24■□□□□ 0.03
RCL1-201ENST00000381728 CCDC88BA6NC98 1476 aa15.21■□□□□ 0.03
RCL1-201ENST00000381728 CFTRP13569 1480 aa15.16■□□□□ 0.02
RCL1-201ENST00000381728 CADPSQ9ULU8 1353 aa15.16■□□□□ 0.02
RCL1-201ENST00000381728 PRDM2Q13029 1718 aa15.12■□□□□ 0.01
RCL1-201ENST00000381728 PDS5BQ9NTI5 1447 aa15.08■□□□□ 0
RCL1-201ENST00000381728 WDR62O43379 1518 aa15.07■□□□□ 0
RCL1-201ENST00000381728 SLC4A1APQ9BWU0 796 aaKnown RBP15.06■□□□□ 0
RCL1-201ENST00000381728 MRC2Q9UBG0 1479 aa15.03■□□□□ -0
RCL1-201ENST00000381728 NCBP3Q53F19 620 aaKnown RBP15.01□□□□□ -0.01
RCL1-201ENST00000381728 CSRNP3Q8WYN3 585 aa14.99□□□□□ -0.01
RCL1-201ENST00000381728 ABCC8Q09428 1581 aa14.95□□□□□ -0.02
RCL1-201ENST00000381728 FANCD2Q9BXW9 1451 aa14.94□□□□□ -0.02
RCL1-201ENST00000381728 CEP164Q9UPV0 1460 aa14.92□□□□□ -0.02
RCL1-201ENST00000381728 RIMBP3CA6NJZ7 1639 aa14.91□□□□□ -0.02
RCL1-201ENST00000381728 RIMBP3BA6NNM3 1639 aa14.91□□□□□ -0.02
RCL1-201ENST00000381728 RIMBP3Q9UFD9 1639 aa14.91□□□□□ -0.02
RCL1-201ENST00000381728 NPM3O75607 178 aaKnown RBP14.88□□□□□ -0.03
RCL1-201ENST00000381728 OSCARQ8IYS5 282 aa14.83□□□□□ -0.04
RCL1-201ENST00000381728 DNMBPQ6XZF7 1577 aa14.8□□□□□ -0.04
RCL1-201ENST00000381728 WRNQ14191 1432 aaPredicted RBP eCLIP14.78□□□□□ -0.04
RCL1-201ENST00000381728 ARHGEF11O15085 1522 aa14.76□□□□□ -0.05
RCL1-201ENST00000381728 TOP2BQ02880 1626 aa14.76□□□□□ -0.05
RCL1-201ENST00000381728 BIVM-ERCC5R4GMW8 1640 aa14.76□□□□□ -0.05
RCL1-201ENST00000381728 URB2Q14146 1524 aaKnown RBP14.75□□□□□ -0.05
RCL1-201ENST00000381728 TOPBP1Q92547 1522 aa14.73□□□□□ -0.05
RCL1-201ENST00000381728 CUX1P39880 1505 aa14.7□□□□□ -0.06
RCL1-201ENST00000381728 WDR97A6NE52 1622 aa14.7□□□□□ -0.06
RCL1-201ENST00000381728 CNKSR2Q8WXI2 1034 aa14.68□□□□□ -0.06
RCL1-201ENST00000381728 CHD1O14646 1710 aa14.64□□□□□ -0.07
RCL1-201ENST00000381728 SYNJ1O43426 1573 aa14.64□□□□□ -0.07
RCL1-201ENST00000381728 IFT140Q96RY7 1462 aa14.63□□□□□ -0.07
RCL1-201ENST00000381728 ZNF608Q9ULD9 1512 aaPredicted RBP14.63□□□□□ -0.07
RCL1-201ENST00000381728 POLA1P09884 1462 aaPredicted RBP14.62□□□□□ -0.07
RCL1-201ENST00000381728 EIF4G3O43432 1585 aaKnown RBP14.61□□□□□ -0.07
RCL1-201ENST00000381728 FGD5Q6ZNL6 1462 aa14.6□□□□□ -0.07
RCL1-201ENST00000381728 SCAF1Q9H7N4 1312 aaKnown RBP14.6□□□□□ -0.07
RCL1-201ENST00000381728 ARAP1Q96P48 1450 aa14.59□□□□□ -0.07
RCL1-201ENST00000381728 ABCA10Q8WWZ4 1543 aa14.59□□□□□ -0.07
RCL1-201ENST00000381728 SOGA1O94964 1423 aa14.58□□□□□ -0.08
RCL1-201ENST00000381728 TARBP1Q13395 1621 aaKnown RBP14.56□□□□□ -0.08
RCL1-201ENST00000381728 EEA1Q15075 1411 aa14.56□□□□□ -0.08
RCL1-201ENST00000381728 ZBTB22O15209 634 aa14.54□□□□□ -0.08
RCL1-201ENST00000381728 CYB5RLQ6IPT4 315 aa14.54□□□□□ -0.08
RCL1-201ENST00000381728 TRHP20396 242 aaPredicted RBP14.53□□□□□ -0.08
RCL1-201ENST00000381728 MSH5O43196 834 aa14.51□□□□□ -0.09
RCL1-201ENST00000381728 KIF27Q86VH2 1401 aa14.49□□□□□ -0.09
RCL1-201ENST00000381728 ABCA5Q8WWZ7 1642 aa14.47□□□□□ -0.09
RCL1-201ENST00000381728 ERICH3Q5RHP9 1530 aa14.46□□□□□ -0.09
RCL1-201ENST00000381728 RAD54L2Q9Y4B4 1467 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms