RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 NISCHQ9Y2I1 1504 aa25.47■■□□□ 1.67
PITRM1-202ENST00000380989 CCDC180Q9P1Z9 1646 aa22.07■■□□□ 1.12
PITRM1-202ENST00000380989 DCAF8L2P0C7V8 631 aa21.48■■□□□ 1.03
PITRM1-202ENST00000380989 ABCC9O60706 1549 aa21.35■■□□□ 1.01
PITRM1-202ENST00000380989 ZCCHC6Q5VYS8 1495 aaKnown RBP21.34■■□□□ 1.01
PITRM1-202ENST00000380989 SHROOM4Q9ULL8 1493 aa21.12■□□□□ 0.97
PITRM1-202ENST00000380989 DCAF1Q9Y4B6 1507 aa20.84■□□□□ 0.93
PITRM1-202ENST00000380989 NACADO15069 1562 aa20.62■□□□□ 0.89
PITRM1-202ENST00000380989 SCRIBQ14160 1630 aa20.61■□□□□ 0.89
PITRM1-202ENST00000380989 MYO15BQ96JP2 1530 aa20.58■□□□□ 0.88
PITRM1-202ENST00000380989 RB1CC1Q8TDY2 1594 aa20.52■□□□□ 0.88
PITRM1-202ENST00000380989 PABPN1Q86U42 306 aaKnown RBP eCLIP20.24■□□□□ 0.83
PITRM1-202ENST00000380989 SUPT5HO00267 1087 aaKnown RBP20.23■□□□□ 0.83
PITRM1-202ENST00000380989 UNC13AQ9UPW8 1703 aa20.23■□□□□ 0.83
PITRM1-202ENST00000380989 BICRAQ9NZM4 1560 aa20.02■□□□□ 0.79
PITRM1-202ENST00000380989 CECR2Q9BXF3 1484 aa19.98■□□□□ 0.79
PITRM1-202ENST00000380989 RSF1Q96T23 1441 aaPredicted RBP19.8■□□□□ 0.76
PITRM1-202ENST00000380989 MROH2BQ7Z745 1585 aa19.79■□□□□ 0.76
PITRM1-202ENST00000380989 WIZO95785 1651 aa19.64■□□□□ 0.73
PITRM1-202ENST00000380989 BAZ1AQ9NRL2 1556 aaPredicted RBP19.62■□□□□ 0.73
PITRM1-202ENST00000380989 SMARCA4P51532 1647 aa19.6■□□□□ 0.73
PITRM1-202ENST00000380989 PPARGC1BQ86YN6 1023 aaKnown RBP19.44■□□□□ 0.7
PITRM1-202ENST00000380989 EIF4G1Q04637 1599 aaKnown RBP19.42■□□□□ 0.7
PITRM1-202ENST00000380989 ATAD2BQ9ULI0 1458 aa19.33■□□□□ 0.68
PITRM1-202ENST00000380989 PCGF6Q9BYE7 350 aa19.3■□□□□ 0.68
PITRM1-202ENST00000380989 HRCP23327 699 aa19.28■□□□□ 0.68
PITRM1-202ENST00000380989 TOP2AP11388 1531 aaKnown RBP19.27■□□□□ 0.67
PITRM1-202ENST00000380989 PEG3Q9GZU2 1588 aa19.23■□□□□ 0.67
PITRM1-202ENST00000380989 BAZ1BQ9UIG0 1483 aaKnown RBP19.22■□□□□ 0.67
PITRM1-202ENST00000380989 SMARCA2P51531 1590 aa19.2■□□□□ 0.66
PITRM1-202ENST00000380989 CCDC88BA6NC98 1476 aa19.19■□□□□ 0.66
PITRM1-202ENST00000380989 CC2D2AQ9P2K1 1620 aa19.19■□□□□ 0.66
PITRM1-202ENST00000380989 CHIC1Q5VXU3 224 aa19.16■□□□□ 0.66
PITRM1-202ENST00000380989 NCAPD3P42695 1498 aa19.09■□□□□ 0.65
PITRM1-202ENST00000380989 DNAJC5BQ9UF47 199 aa19.09■□□□□ 0.65
PITRM1-202ENST00000380989 HMGXB3Q12766 1538 aa19■□□□□ 0.63
PITRM1-202ENST00000380989 ABCC8Q09428 1581 aa18.88■□□□□ 0.61
PITRM1-202ENST00000380989 TRIM41Q8WV44 630 aa18.87■□□□□ 0.61
PITRM1-202ENST00000380989 LOC105371045A0A1W2PR82 267 aa18.86■□□□□ 0.61
PITRM1-202ENST00000380989 FAM9AQ8IZU1 332 aaPredicted RBP18.76■□□□□ 0.59
PITRM1-202ENST00000380989 NESP48681 1621 aa18.74■□□□□ 0.59
PITRM1-202ENST00000380989 EHMT2Q96KQ7 1210 aa18.69■□□□□ 0.58
PITRM1-202ENST00000380989 CFTRP13569 1480 aa18.69■□□□□ 0.58
PITRM1-202ENST00000380989 CADPSQ9ULU8 1353 aa18.67■□□□□ 0.58
PITRM1-202ENST00000380989 WRNQ14191 1432 aaPredicted RBP eCLIP18.62■□□□□ 0.57
PITRM1-202ENST00000380989 SYNJ1O43426 1573 aa18.59■□□□□ 0.57
PITRM1-202ENST00000380989 FANCD2Q9BXW9 1451 aa18.5■□□□□ 0.55
PITRM1-202ENST00000380989 SOGA1O94964 1423 aa18.5■□□□□ 0.55
PITRM1-202ENST00000380989 RUSC2Q8N2Y8 1516 aa18.48■□□□□ 0.55
PITRM1-202ENST00000380989 CUX1P39880 1505 aa18.48■□□□□ 0.55
PITRM1-202ENST00000380989 PRDM2Q13029 1718 aa18.46■□□□□ 0.55
PITRM1-202ENST00000380989 LAMC3Q9Y6N6 1575 aa18.43■□□□□ 0.54
PITRM1-202ENST00000380989 SCAF1Q9H7N4 1312 aaKnown RBP18.41■□□□□ 0.54
PITRM1-202ENST00000380989 TOP2BQ02880 1626 aa18.4■□□□□ 0.54
PITRM1-202ENST00000380989 KIF21AQ7Z4S6 1674 aa18.39■□□□□ 0.53
PITRM1-202ENST00000380989 CEP164Q9UPV0 1460 aa18.36■□□□□ 0.53
PITRM1-202ENST00000380989 BIVM-ERCC5R4GMW8 1640 aa18.35■□□□□ 0.53
PITRM1-202ENST00000380989 PDS5BQ9NTI5 1447 aa18.34■□□□□ 0.53
PITRM1-202ENST00000380989 URB2Q14146 1524 aaKnown RBP18.31■□□□□ 0.52
PITRM1-202ENST00000380989 FGD5Q6ZNL6 1462 aa18.29■□□□□ 0.52
PITRM1-202ENST00000380989 TRIM26Q12899 539 aaPredicted RBP18.29■□□□□ 0.52
PITRM1-202ENST00000380989 TOPBP1Q92547 1522 aa18.28■□□□□ 0.52
PITRM1-202ENST00000380989 RAD54L2Q9Y4B4 1467 aa18.26■□□□□ 0.51
PITRM1-202ENST00000380989 CSRNP3Q8WYN3 585 aa18.26■□□□□ 0.51
PITRM1-202ENST00000380989 ERCC6Q03468 1493 aa18.23■□□□□ 0.51
PITRM1-202ENST00000380989 DNMBPQ6XZF7 1577 aa18.23■□□□□ 0.51
PITRM1-202ENST00000380989 POLA1P09884 1462 aaPredicted RBP18.21■□□□□ 0.51
PITRM1-202ENST00000380989 CUX2O14529 1486 aa18.18■□□□□ 0.5
PITRM1-202ENST00000380989 MRC2Q9UBG0 1479 aa18.13■□□□□ 0.49
PITRM1-202ENST00000380989 UBTFP17480 764 aaKnown RBP18.13■□□□□ 0.49
PITRM1-202ENST00000380989 RANGAP1P46060 587 aaPredicted RBP18.13■□□□□ 0.49
PITRM1-202ENST00000380989 TDRD9Q8NDG6 1382 aaKnown RBP18.12■□□□□ 0.49
PITRM1-202ENST00000380989 KIF27Q86VH2 1401 aa18.11■□□□□ 0.49
PITRM1-202ENST00000380989 EEA1Q15075 1411 aa18.1■□□□□ 0.49
PITRM1-202ENST00000380989 RAPGEF2Q9Y4G8 1499 aa18.07■□□□□ 0.48
PITRM1-202ENST00000380989 IGF1RP08069 1367 aa18.03■□□□□ 0.48
PITRM1-202ENST00000380989 THOC2Q8NI27 1593 aaKnown RBP18.03■□□□□ 0.48
PITRM1-202ENST00000380989 ABCA10Q8WWZ4 1543 aa18.02■□□□□ 0.48
PITRM1-202ENST00000380989 WDR62O43379 1518 aa18.01■□□□□ 0.47
PITRM1-202ENST00000380989 TTBK1Q5TCY1 1321 aaPredicted RBP18■□□□□ 0.47
PITRM1-202ENST00000380989 AQRO60306 1485 aaKnown RBP eCLIP18■□□□□ 0.475e-7■■■■■ 28.3
PITRM1-202ENST00000380989 GOLGA3Q08378 1498 aa17.99■□□□□ 0.47
PITRM1-202ENST00000380989 ZNF608Q9ULD9 1512 aaPredicted RBP17.99■□□□□ 0.47
PITRM1-202ENST00000380989 TARBP1Q13395 1621 aaKnown RBP17.98■□□□□ 0.47
PITRM1-202ENST00000380989 NEUROD1Q13562 356 aa17.97■□□□□ 0.47
PITRM1-202ENST00000380989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.96■□□□□ 0.47
PITRM1-202ENST00000380989 PRXQ9BXM0 1461 aa17.96■□□□□ 0.47
PITRM1-202ENST00000380989 WDR97A6NE52 1622 aa17.96■□□□□ 0.47
PITRM1-202ENST00000380989 KIF21BO75037 1637 aa17.95■□□□□ 0.46
PITRM1-202ENST00000380989 PELP1Q8IZL8 1130 aaKnown RBP17.94■□□□□ 0.46
PITRM1-202ENST00000380989 CARMIL1Q5VZK9 1371 aa17.93■□□□□ 0.46
PITRM1-202ENST00000380989 GAPVD1Q14C86 1478 aa17.93■□□□□ 0.46
PITRM1-202ENST00000380989 TNIKQ9UKE5 1360 aa17.91■□□□□ 0.46
PITRM1-202ENST00000380989 CEP162Q5TB80 1403 aa17.91■□□□□ 0.46
PITRM1-202ENST00000380989 ABCA5Q8WWZ7 1642 aa17.89■□□□□ 0.45
PITRM1-202ENST00000380989 IFT140Q96RY7 1462 aa17.87■□□□□ 0.45
PITRM1-202ENST00000380989 GTF3C3Q9Y5Q9 886 aa17.84■□□□□ 0.45
PITRM1-202ENST00000380989 ERICH3Q5RHP9 1530 aa17.82■□□□□ 0.44
PITRM1-202ENST00000380989 ZEB1P37275 1124 aaPredicted RBP17.81■□□□□ 0.44
PITRM1-202ENST00000380989 EIF4G3O43432 1585 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms