RNA–Protein interactions for RNA: ENST00000380598.4

SMG1P4-201, Transcript of SMG1 pseudogene 4, humanhuman

TSL 5

Gene SMG1P4, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P4-201ENST00000380598 AEBP2Q6ZN18 517 aaPredicted RBP15.31■□□□□ 0.04
SMG1P4-201ENST00000380598 CHIC1Q5VXU3 224 aa14.96□□□□□ -0.01
SMG1P4-201ENST00000380598 NISCHQ9Y2I1 1504 aa14.07□□□□□ -0.16
SMG1P4-201ENST00000380598 PHF23Q9BUL5 403 aaPredicted RBP13.23□□□□□ -0.29
SMG1P4-201ENST00000380598 SENP3Q9H4L4 574 aaPredicted RBP13.2□□□□□ -0.3
SMG1P4-201ENST00000380598 POTEDQ86YR6 584 aa12.73□□□□□ -0.37
SMG1P4-201ENST00000380598 CCDC180Q9P1Z9 1646 aa12.67□□□□□ -0.38
SMG1P4-201ENST00000380598 ABCC9O60706 1549 aa12.62□□□□□ -0.39
SMG1P4-201ENST00000380598 FOXD1Q16676 465 aa12.29□□□□□ -0.44
SMG1P4-201ENST00000380598 PLPPR3Q6T4P5 718 aa12.2□□□□□ -0.46
SMG1P4-201ENST00000380598 RB1CC1Q8TDY2 1594 aa12.02□□□□□ -0.49
SMG1P4-201ENST00000380598 NACADO15069 1562 aa11.92□□□□□ -0.5
SMG1P4-201ENST00000380598 MSH5O43196 834 aa11.9□□□□□ -0.5
SMG1P4-201ENST00000380598 UNC13AQ9UPW8 1703 aa11.81□□□□□ -0.52
SMG1P4-201ENST00000380598 DCAF8L2P0C7V8 631 aa11.77□□□□□ -0.53
SMG1P4-201ENST00000380598 DNAJC5BQ9UF47 199 aa11.77□□□□□ -0.53
SMG1P4-201ENST00000380598 MYO15BQ96JP2 1530 aa11.76□□□□□ -0.53
SMG1P4-201ENST00000380598 BICRAQ9NZM4 1560 aa11.71□□□□□ -0.54
SMG1P4-201ENST00000380598 ZCCHC6Q5VYS8 1495 aaKnown RBP11.7□□□□□ -0.54
SMG1P4-201ENST00000380598 PABPN1Q86U42 306 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMG1P4-201ENST00000380598 PPP6R1Q9UPN7 881 aa11.65□□□□□ -0.54
SMG1P4-201ENST00000380598 DCAF1Q9Y4B6 1507 aa11.63□□□□□ -0.55
SMG1P4-201ENST00000380598 ADRA2BP18089 450 aa11.62□□□□□ -0.55
SMG1P4-201ENST00000380598 SCRIBQ14160 1630 aa11.54□□□□□ -0.56
SMG1P4-201ENST00000380598 SHROOM4Q9ULL8 1493 aa11.51□□□□□ -0.57
SMG1P4-201ENST00000380598 CC2D2AQ9P2K1 1620 aa11.42□□□□□ -0.58
SMG1P4-201ENST00000380598 EIF4G1Q04637 1599 aaKnown RBP11.4□□□□□ -0.58
SMG1P4-201ENST00000380598 PIAS4Q8N2W9 510 aaPredicted RBP11.35□□□□□ -0.59
SMG1P4-201ENST00000380598 CECR2Q9BXF3 1484 aa11.35□□□□□ -0.59
SMG1P4-201ENST00000380598 SMARCA4P51532 1647 aa11.01□□□□□ -0.65
SMG1P4-201ENST00000380598 NCAPD3P42695 1498 aa11□□□□□ -0.65
SMG1P4-201ENST00000380598 ATAD2BQ9ULI0 1458 aa10.98□□□□□ -0.65
SMG1P4-201ENST00000380598 HMGXB3Q12766 1538 aa10.96□□□□□ -0.65
SMG1P4-201ENST00000380598 SMARCA2P51531 1590 aa10.95□□□□□ -0.66
SMG1P4-201ENST00000380598 BAZ1AQ9NRL2 1556 aaPredicted RBP10.93□□□□□ -0.66
SMG1P4-201ENST00000380598 KCNA4P22459 653 aa10.92□□□□□ -0.66
SMG1P4-201ENST00000380598 PEG3Q9GZU2 1588 aa10.9□□□□□ -0.67
SMG1P4-201ENST00000380598 ERCC6Q03468 1493 aa10.87□□□□□ -0.67
SMG1P4-201ENST00000380598 BAZ1BQ9UIG0 1483 aaKnown RBP10.87□□□□□ -0.67
SMG1P4-201ENST00000380598 CUX2O14529 1486 aa10.87□□□□□ -0.67
SMG1P4-201ENST00000380598 NESP48681 1621 aa10.86□□□□□ -0.67
SMG1P4-201ENST00000380598 MROH2BQ7Z745 1585 aa10.86□□□□□ -0.67
SMG1P4-201ENST00000380598 PPP4R3CPQ6ZMV5 832 aa10.81□□□□□ -0.68
SMG1P4-201ENST00000380598 THOC2Q8NI27 1593 aaKnown RBP10.8□□□□□ -0.68
SMG1P4-201ENST00000380598 LAMC3Q9Y6N6 1575 aa10.78□□□□□ -0.68
SMG1P4-201ENST00000380598 DNAJC5Q9H3Z4 198 aa10.77□□□□□ -0.69
SMG1P4-201ENST00000380598 KIF21AQ7Z4S6 1674 aa10.76□□□□□ -0.69
SMG1P4-201ENST00000380598 WIZO95785 1651 aa10.75□□□□□ -0.69
SMG1P4-201ENST00000380598 PDS5BQ9NTI5 1447 aa10.67□□□□□ -0.7
SMG1P4-201ENST00000380598 CADPSQ9ULU8 1353 aa10.65□□□□□ -0.71
SMG1P4-201ENST00000380598 MRC2Q9UBG0 1479 aa10.61□□□□□ -0.71
SMG1P4-201ENST00000380598 CACNB1Q02641 598 aaPredicted RBP10.61□□□□□ -0.71
SMG1P4-201ENST00000380598 WDR62O43379 1518 aa10.61□□□□□ -0.71
SMG1P4-201ENST00000380598 RSF1Q96T23 1441 aaPredicted RBP10.6□□□□□ -0.71
SMG1P4-201ENST00000380598 TOP2AP11388 1531 aaKnown RBP10.6□□□□□ -0.71
SMG1P4-201ENST00000380598 NCBP3Q53F19 620 aaKnown RBP10.58□□□□□ -0.72
SMG1P4-201ENST00000380598 CEP164Q9UPV0 1460 aa10.57□□□□□ -0.72
SMG1P4-201ENST00000380598 CFTRP13569 1480 aa10.55□□□□□ -0.72
SMG1P4-201ENST00000380598 FANCD2Q9BXW9 1451 aa10.55□□□□□ -0.72
SMG1P4-201ENST00000380598 MAPK8IP2Q13387 824 aaPredicted RBP10.53□□□□□ -0.72
SMG1P4-201ENST00000380598 PRDM2Q13029 1718 aa10.53□□□□□ -0.72
SMG1P4-201ENST00000380598 EHMT2Q96KQ7 1210 aa10.5□□□□□ -0.73
SMG1P4-201ENST00000380598 SCAF1Q9H7N4 1312 aaKnown RBP10.49□□□□□ -0.73
SMG1P4-201ENST00000380598 URB2Q14146 1524 aaKnown RBP10.48□□□□□ -0.73
SMG1P4-201ENST00000380598 NPM3O75607 178 aaKnown RBP10.47□□□□□ -0.73
SMG1P4-201ENST00000380598 CCDC88BA6NC98 1476 aa10.44□□□□□ -0.74
SMG1P4-201ENST00000380598 SLC4A1APQ9BWU0 796 aaKnown RBP10.44□□□□□ -0.74
SMG1P4-201ENST00000380598 CNKSR2Q8WXI2 1034 aa10.42□□□□□ -0.74
SMG1P4-201ENST00000380598 TOPBP1Q92547 1522 aa10.37□□□□□ -0.75
SMG1P4-201ENST00000380598 ZNF608Q9ULD9 1512 aaPredicted RBP10.35□□□□□ -0.75
SMG1P4-201ENST00000380598 IFT140Q96RY7 1462 aa10.35□□□□□ -0.75
SMG1P4-201ENST00000380598 DNMBPQ6XZF7 1577 aa10.35□□□□□ -0.75
SMG1P4-201ENST00000380598 EIF4G3O43432 1585 aaKnown RBP10.34□□□□□ -0.75
SMG1P4-201ENST00000380598 TRIM41Q8WV44 630 aa10.32□□□□□ -0.76
SMG1P4-201ENST00000380598 DMRT2Q9Y5R5 561 aa10.32□□□□□ -0.76
SMG1P4-201ENST00000380598 TARBP1Q13395 1621 aaKnown RBP10.3□□□□□ -0.76
SMG1P4-201ENST00000380598 ABCC8Q09428 1581 aa10.3□□□□□ -0.76
SMG1P4-201ENST00000380598 OSCARQ8IYS5 282 aa10.28□□□□□ -0.76
SMG1P4-201ENST00000380598 RIMBP3CA6NJZ7 1639 aa10.27□□□□□ -0.77
SMG1P4-201ENST00000380598 RIMBP3BA6NNM3 1639 aa10.27□□□□□ -0.77
SMG1P4-201ENST00000380598 RIMBP3Q9UFD9 1639 aa10.27□□□□□ -0.77
SMG1P4-201ENST00000380598 POLA1P09884 1462 aaPredicted RBP10.27□□□□□ -0.77
SMG1P4-201ENST00000380598 CSRNP3Q8WYN3 585 aa10.26□□□□□ -0.77
SMG1P4-201ENST00000380598 CHD1O14646 1710 aa10.26□□□□□ -0.77
SMG1P4-201ENST00000380598 AQRO60306 1485 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMG1P4-201ENST00000380598 ARHGEF11O15085 1522 aa10.23□□□□□ -0.77
SMG1P4-201ENST00000380598 RAD54L2Q9Y4B4 1467 aa10.22□□□□□ -0.77
SMG1P4-201ENST00000380598 WDR97A6NE52 1622 aa10.2□□□□□ -0.78
SMG1P4-201ENST00000380598 CUX1P39880 1505 aa10.2□□□□□ -0.78
SMG1P4-201ENST00000380598 FGD5Q6ZNL6 1462 aa10.2□□□□□ -0.78
SMG1P4-201ENST00000380598 RNF216Q9NWF9 866 aaPredicted RBP10.17□□□□□ -0.78
SMG1P4-201ENST00000380598 SNAPC4Q5SXM2 1469 aa10.17□□□□□ -0.78
SMG1P4-201ENST00000380598 SOGA1O94964 1423 aa10.16□□□□□ -0.78
SMG1P4-201ENST00000380598 PBRM1Q86U86 1689 aa10.15□□□□□ -0.79
SMG1P4-201ENST00000380598 TDRD9Q8NDG6 1382 aaKnown RBP10.14□□□□□ -0.79
SMG1P4-201ENST00000380598 HOXD11P31277 338 aaPredicted RBP10.14□□□□□ -0.79
SMG1P4-201ENST00000380598 ARAP1Q96P48 1450 aa10.13□□□□□ -0.79
SMG1P4-201ENST00000380598 CLASP1Q7Z460 1538 aa10.12□□□□□ -0.79
SMG1P4-201ENST00000380598 ABCA5Q8WWZ7 1642 aa10.11□□□□□ -0.79
SMG1P4-201ENST00000380598 GRIN2BQ13224 1484 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms