RNA–Protein interactions for RNA: ENST00000380199.9

ZCCHC9-202, Transcript of zinc finger CCHC-type containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZCCHC9, Length 1,372 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC9-202ENST00000380199 AEBP2Q6ZN18 517 aaPredicted RBP29.1■■■□□ 2.25
ZCCHC9-202ENST00000380199 CHIC1Q5VXU3 224 aa28.15■■■□□ 2.1
ZCCHC9-202ENST00000380199 NISCHQ9Y2I1 1504 aa25.81■■□□□ 1.72
ZCCHC9-202ENST00000380199 PHF23Q9BUL5 403 aaPredicted RBP24.74■■□□□ 1.55
ZCCHC9-202ENST00000380199 SENP3Q9H4L4 574 aaPredicted RBP24.73■■□□□ 1.55
ZCCHC9-202ENST00000380199 FOXD1Q16676 465 aa22.99■■□□□ 1.27
ZCCHC9-202ENST00000380199 CCDC180Q9P1Z9 1646 aa22.92■■□□□ 1.26
ZCCHC9-202ENST00000380199 PLPPR3Q6T4P5 718 aa22.74■■□□□ 1.23
ZCCHC9-202ENST00000380199 ABCC9O60706 1549 aa22.49■■□□□ 1.19
ZCCHC9-202ENST00000380199 PPP6R1Q9UPN7 881 aa21.92■■□□□ 1.1
ZCCHC9-202ENST00000380199 ADRA2BP18089 450 aa21.88■■□□□ 1.09
ZCCHC9-202ENST00000380199 PIAS4Q8N2W9 510 aaPredicted RBP21.62■■□□□ 1.05
ZCCHC9-202ENST00000380199 RB1CC1Q8TDY2 1594 aa21.6■■□□□ 1.05
ZCCHC9-202ENST00000380199 NACADO15069 1562 aa21.58■■□□□ 1.05
ZCCHC9-202ENST00000380199 DCAF8L2P0C7V8 631 aa21.53■■□□□ 1.04
ZCCHC9-202ENST00000380199 ZCCHC6Q5VYS8 1495 aaKnown RBP21.51■■□□□ 1.03
ZCCHC9-202ENST00000380199 MYO15BQ96JP2 1530 aa21.47■■□□□ 1.03
ZCCHC9-202ENST00000380199 DCAF1Q9Y4B6 1507 aa21.37■■□□□ 1.01
ZCCHC9-202ENST00000380199 MSH5O43196 834 aa21.3■■□□□ 1
ZCCHC9-202ENST00000380199 UNC13AQ9UPW8 1703 aa21.05■□□□□ 0.96
ZCCHC9-202ENST00000380199 PABPN1Q86U42 306 aaKnown RBP eCLIP21.02■□□□□ 0.96
ZCCHC9-202ENST00000380199 POTEDQ86YR6 584 aa21.01■□□□□ 0.95
ZCCHC9-202ENST00000380199 BICRAQ9NZM4 1560 aa20.98■□□□□ 0.95
ZCCHC9-202ENST00000380199 SCRIBQ14160 1630 aa20.92■□□□□ 0.94
ZCCHC9-202ENST00000380199 SHROOM4Q9ULL8 1493 aa20.76■□□□□ 0.91
ZCCHC9-202ENST00000380199 DNAJC5BQ9UF47 199 aa20.71■□□□□ 0.91
ZCCHC9-202ENST00000380199 EIF4G1Q04637 1599 aaKnown RBP20.42■□□□□ 0.86
ZCCHC9-202ENST00000380199 CC2D2AQ9P2K1 1620 aa20.33■□□□□ 0.84
ZCCHC9-202ENST00000380199 CECR2Q9BXF3 1484 aa20.22■□□□□ 0.83
ZCCHC9-202ENST00000380199 SMARCA4P51532 1647 aa20.02■□□□□ 0.79
ZCCHC9-202ENST00000380199 PPP4R3CPQ6ZMV5 832 aa20.01■□□□□ 0.79
ZCCHC9-202ENST00000380199 SCAF1Q9H7N4 1312 aaKnown RBP20■□□□□ 0.79
ZCCHC9-202ENST00000380199 BAZ1AQ9NRL2 1556 aaPredicted RBP19.99■□□□□ 0.79
ZCCHC9-202ENST00000380199 NCAPD3P42695 1498 aa19.94■□□□□ 0.78
ZCCHC9-202ENST00000380199 ATAD2BQ9ULI0 1458 aa19.94■□□□□ 0.78
ZCCHC9-202ENST00000380199 MAPK8IP2Q13387 824 aaPredicted RBP19.94■□□□□ 0.78
ZCCHC9-202ENST00000380199 SMARCA2P51531 1590 aa19.89■□□□□ 0.77
ZCCHC9-202ENST00000380199 MROH2BQ7Z745 1585 aa19.89■□□□□ 0.77
ZCCHC9-202ENST00000380199 PEG3Q9GZU2 1588 aa19.85■□□□□ 0.77
ZCCHC9-202ENST00000380199 HMGXB3Q12766 1538 aa19.82■□□□□ 0.76
ZCCHC9-202ENST00000380199 BAZ1BQ9UIG0 1483 aaKnown RBP19.76■□□□□ 0.75
ZCCHC9-202ENST00000380199 DMRT2Q9Y5R5 561 aa19.7■□□□□ 0.74
ZCCHC9-202ENST00000380199 RSF1Q96T23 1441 aaPredicted RBP19.66■□□□□ 0.74
ZCCHC9-202ENST00000380199 WIZO95785 1651 aa19.64■□□□□ 0.74
ZCCHC9-202ENST00000380199 CNKSR2Q8WXI2 1034 aa19.5■□□□□ 0.71
ZCCHC9-202ENST00000380199 TOP2AP11388 1531 aaKnown RBP19.46■□□□□ 0.71
ZCCHC9-202ENST00000380199 NESP48681 1621 aa19.45■□□□□ 0.7
ZCCHC9-202ENST00000380199 NCBP3Q53F19 620 aaKnown RBP19.39■□□□□ 0.69
ZCCHC9-202ENST00000380199 LAMC3Q9Y6N6 1575 aa19.39■□□□□ 0.69
ZCCHC9-202ENST00000380199 ERCC6Q03468 1493 aa19.37■□□□□ 0.69
ZCCHC9-202ENST00000380199 CADPSQ9ULU8 1353 aa19.35■□□□□ 0.69
ZCCHC9-202ENST00000380199 PDS5BQ9NTI5 1447 aa19.27■□□□□ 0.68
ZCCHC9-202ENST00000380199 KCNA4P22459 653 aa19.25■□□□□ 0.67
ZCCHC9-202ENST00000380199 CCDC88BA6NC98 1476 aa19.24■□□□□ 0.67
ZCCHC9-202ENST00000380199 CFTRP13569 1480 aa19.24■□□□□ 0.67
ZCCHC9-202ENST00000380199 CUX2O14529 1486 aa19.2■□□□□ 0.66
ZCCHC9-202ENST00000380199 KIF21AQ7Z4S6 1674 aa19.18■□□□□ 0.66
ZCCHC9-202ENST00000380199 HOXD11P31277 338 aaPredicted RBP19.18■□□□□ 0.66
ZCCHC9-202ENST00000380199 RNF216Q9NWF9 866 aaPredicted RBP19.18■□□□□ 0.66
ZCCHC9-202ENST00000380199 THOC2Q8NI27 1593 aaKnown RBP19.16■□□□□ 0.66
ZCCHC9-202ENST00000380199 FANCD2Q9BXW9 1451 aa19.12■□□□□ 0.65
ZCCHC9-202ENST00000380199 NPM3O75607 178 aaKnown RBP19.12■□□□□ 0.65
ZCCHC9-202ENST00000380199 CEP164Q9UPV0 1460 aa19.09■□□□□ 0.65
ZCCHC9-202ENST00000380199 SUPT5HO00267 1087 aaKnown RBP19.09■□□□□ 0.65
ZCCHC9-202ENST00000380199 MRC2Q9UBG0 1479 aa19.08■□□□□ 0.65
ZCCHC9-202ENST00000380199 WDR62O43379 1518 aa19.02■□□□□ 0.64
ZCCHC9-202ENST00000380199 PRDM2Q13029 1718 aa18.98■□□□□ 0.63
ZCCHC9-202ENST00000380199 URB2Q14146 1524 aaKnown RBP18.94■□□□□ 0.62
ZCCHC9-202ENST00000380199 DNAJC5Q9H3Z4 198 aa18.92■□□□□ 0.62
ZCCHC9-202ENST00000380199 DCAF8L1A6NGE4 600 aa18.88■□□□□ 0.61
ZCCHC9-202ENST00000380199 TOPBP1Q92547 1522 aa18.81■□□□□ 0.6
ZCCHC9-202ENST00000380199 ABCC8Q09428 1581 aa18.8■□□□□ 0.6
ZCCHC9-202ENST00000380199 DNMBPQ6XZF7 1577 aa18.77■□□□□ 0.6
ZCCHC9-202ENST00000380199 IFT140Q96RY7 1462 aa18.71■□□□□ 0.59
ZCCHC9-202ENST00000380199 CUX1P39880 1505 aa18.66■□□□□ 0.58
ZCCHC9-202ENST00000380199 POLA1P09884 1462 aaPredicted RBP18.66■□□□□ 0.58
ZCCHC9-202ENST00000380199 ZNF608Q9ULD9 1512 aaPredicted RBP18.63■□□□□ 0.57
ZCCHC9-202ENST00000380199 TARBP1Q13395 1621 aaKnown RBP18.6■□□□□ 0.57
ZCCHC9-202ENST00000380199 FGD5Q6ZNL6 1462 aa18.6■□□□□ 0.57
ZCCHC9-202ENST00000380199 SOGA1O94964 1423 aa18.58■□□□□ 0.56
ZCCHC9-202ENST00000380199 RAD54L2Q9Y4B4 1467 aa18.57■□□□□ 0.56
ZCCHC9-202ENST00000380199 WRNQ14191 1432 aaPredicted RBP eCLIP18.53■□□□□ 0.56
ZCCHC9-202ENST00000380199 EIF4G3O43432 1585 aaKnown RBP18.53■□□□□ 0.56
ZCCHC9-202ENST00000380199 AQRO60306 1485 aaKnown RBP eCLIP18.51■□□□□ 0.55
ZCCHC9-202ENST00000380199 SYNJ1O43426 1573 aa18.47■□□□□ 0.55
ZCCHC9-202ENST00000380199 TOP2BQ02880 1626 aa18.47■□□□□ 0.55
ZCCHC9-202ENST00000380199 TDRD9Q8NDG6 1382 aaKnown RBP18.47■□□□□ 0.55
ZCCHC9-202ENST00000380199 BIVM-ERCC5R4GMW8 1640 aa18.47■□□□□ 0.55
ZCCHC9-202ENST00000380199 WDR97A6NE52 1622 aa18.45■□□□□ 0.54
ZCCHC9-202ENST00000380199 ABCA10Q8WWZ4 1543 aa18.43■□□□□ 0.54
ZCCHC9-202ENST00000380199 OSCARQ8IYS5 282 aa18.39■□□□□ 0.53
ZCCHC9-202ENST00000380199 GRIN2BQ13224 1484 aa18.36■□□□□ 0.53
ZCCHC9-202ENST00000380199 GAPVD1Q14C86 1478 aa18.36■□□□□ 0.53
ZCCHC9-202ENST00000380199 SNAPC4Q5SXM2 1469 aa18.35■□□□□ 0.53
ZCCHC9-202ENST00000380199 ABCA5Q8WWZ7 1642 aa18.34■□□□□ 0.53
ZCCHC9-202ENST00000380199 MAGI1Q96QZ7 1491 aaPredicted RBP18.32■□□□□ 0.52
ZCCHC9-202ENST00000380199 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.29■□□□□ 0.525e-8■□□□□ 10.1
ZCCHC9-202ENST00000380199 SLC4A1APQ9BWU0 796 aaKnown RBP18.28■□□□□ 0.52
ZCCHC9-202ENST00000380199 FBLN2P98095 1184 aa18.27■□□□□ 0.51
ZCCHC9-202ENST00000380199 PBRM1Q86U86 1689 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms