RNA–Protein interactions for RNA: ENST00000380034.7

TRIM5-202, Transcript of tripartite motif containing 5, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM5, Length 2,991 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM5-202ENST00000380034 NISCHQ9Y2I1 1504 aa15.92■□□□□ 0.14
TRIM5-202ENST00000380034 CCDC180Q9P1Z9 1646 aa13.96□□□□□ -0.17
TRIM5-202ENST00000380034 ZCCHC6Q5VYS8 1495 aaKnown RBP13.5□□□□□ -0.25
TRIM5-202ENST00000380034 DCAF1Q9Y4B6 1507 aa13.42□□□□□ -0.26
TRIM5-202ENST00000380034 MYO15BQ96JP2 1530 aa13.2□□□□□ -0.3
TRIM5-202ENST00000380034 NACADO15069 1562 aa12.88□□□□□ -0.35
TRIM5-202ENST00000380034 RB1CC1Q8TDY2 1594 aa12.75□□□□□ -0.37
TRIM5-202ENST00000380034 ABCC9O60706 1549 aa12.75□□□□□ -0.37
TRIM5-202ENST00000380034 SHROOM4Q9ULL8 1493 aa12.62□□□□□ -0.39
TRIM5-202ENST00000380034 HRCP23327 699 aa12.61□□□□□ -0.39
TRIM5-202ENST00000380034 SCRIBQ14160 1630 aa12.49□□□□□ -0.41
TRIM5-202ENST00000380034 UNC13AQ9UPW8 1703 aa12.48□□□□□ -0.41
TRIM5-202ENST00000380034 PELP1Q8IZL8 1130 aaKnown RBP12.47□□□□□ -0.41
TRIM5-202ENST00000380034 RSF1Q96T23 1441 aaPredicted RBP12.37□□□□□ -0.43
TRIM5-202ENST00000380034 BICRAQ9NZM4 1560 aa12.32□□□□□ -0.44
TRIM5-202ENST00000380034 DCAF8L2P0C7V8 631 aa12.3□□□□□ -0.44
TRIM5-202ENST00000380034 BAZ1AQ9NRL2 1556 aaPredicted RBP12.27□□□□□ -0.44
TRIM5-202ENST00000380034 SUPT5HO00267 1087 aaKnown RBP12.24□□□□□ -0.45
TRIM5-202ENST00000380034 PEG3Q9GZU2 1588 aa12.22□□□□□ -0.45
TRIM5-202ENST00000380034 MROH2BQ7Z745 1585 aa12.21□□□□□ -0.45
TRIM5-202ENST00000380034 EIF4G1Q04637 1599 aaKnown RBP12.21□□□□□ -0.46
TRIM5-202ENST00000380034 SMARCA4P51532 1647 aa12.19□□□□□ -0.46
TRIM5-202ENST00000380034 CECR2Q9BXF3 1484 aa12.17□□□□□ -0.46
TRIM5-202ENST00000380034 PCGF6Q9BYE7 350 aa12.16□□□□□ -0.46
TRIM5-202ENST00000380034 CHIC1Q5VXU3 224 aa12.16□□□□□ -0.46
TRIM5-202ENST00000380034 TOP2AP11388 1531 aaKnown RBP12.13□□□□□ -0.47
TRIM5-202ENST00000380034 WIZO95785 1651 aa12.12□□□□□ -0.47
TRIM5-202ENST00000380034 PPARGC1BQ86YN6 1023 aaKnown RBP12.12□□□□□ -0.47
TRIM5-202ENST00000380034 DNAJC5Q9H3Z4 198 aa12.1□□□□□ -0.47
TRIM5-202ENST00000380034 MYT1Q01538 1121 aa12.09□□□□□ -0.47
TRIM5-202ENST00000380034 SMARCA2P51531 1590 aa12□□□□□ -0.49
TRIM5-202ENST00000380034 ZEB1P37275 1124 aaPredicted RBP11.96□□□□□ -0.5
TRIM5-202ENST00000380034 TRIM26Q12899 539 aaPredicted RBP11.92□□□□□ -0.5
TRIM5-202ENST00000380034 SCAF1Q9H7N4 1312 aaKnown RBP11.89□□□□□ -0.51
TRIM5-202ENST00000380034 CCDC88BA6NC98 1476 aa11.88□□□□□ -0.51
TRIM5-202ENST00000380034 HMGXB3Q12766 1538 aa11.87□□□□□ -0.51
TRIM5-202ENST00000380034 ATAD2BQ9ULI0 1458 aa11.85□□□□□ -0.51
TRIM5-202ENST00000380034 NCAPD3P42695 1498 aa11.81□□□□□ -0.52
TRIM5-202ENST00000380034 PABPN1Q86U42 306 aaKnown RBP eCLIP11.8□□□□□ -0.52
TRIM5-202ENST00000380034 CC2D2AQ9P2K1 1620 aa11.75□□□□□ -0.53
TRIM5-202ENST00000380034 PRDM2Q13029 1718 aa11.73□□□□□ -0.53
TRIM5-202ENST00000380034 EEA1Q15075 1411 aa11.73□□□□□ -0.53
TRIM5-202ENST00000380034 BAZ1BQ9UIG0 1483 aaKnown RBP11.72□□□□□ -0.53
TRIM5-202ENST00000380034 BIVM-ERCC5R4GMW8 1640 aa11.69□□□□□ -0.54
TRIM5-202ENST00000380034 LOC105371045A0A1W2PR82 267 aa11.66□□□□□ -0.54
TRIM5-202ENST00000380034 ACIN1Q9UKV3 1341 aaKnown RBP11.65□□□□□ -0.54
TRIM5-202ENST00000380034 TRIM41Q8WV44 630 aa11.64□□□□□ -0.55
TRIM5-202ENST00000380034 TOP2BQ02880 1626 aa11.63□□□□□ -0.55
TRIM5-202ENST00000380034 ABCC8Q09428 1581 aa11.62□□□□□ -0.55
TRIM5-202ENST00000380034 KIF21BO75037 1637 aa11.61□□□□□ -0.55
TRIM5-202ENST00000380034 SYNJ1O43426 1573 aa11.59□□□□□ -0.55
TRIM5-202ENST00000380034 CFTRP13569 1480 aa11.58□□□□□ -0.56
TRIM5-202ENST00000380034 WRNQ14191 1432 aaPredicted RBP eCLIP11.58□□□□□ -0.56
TRIM5-202ENST00000380034 CENPBP07199 599 aaPredicted RBP11.53□□□□□ -0.56
TRIM5-202ENST00000380034 NEUROD1Q13562 356 aa11.52□□□□□ -0.56
TRIM5-202ENST00000380034 TNIKQ9UKE5 1360 aa11.5□□□□□ -0.57
TRIM5-202ENST00000380034 LAMC3Q9Y6N6 1575 aa11.49□□□□□ -0.57
TRIM5-202ENST00000380034 ERICH3Q5RHP9 1530 aa11.48□□□□□ -0.57
TRIM5-202ENST00000380034 GTF3C3Q9Y5Q9 886 aa11.47□□□□□ -0.57
TRIM5-202ENST00000380034 GOLGA3Q08378 1498 aa11.45□□□□□ -0.58
TRIM5-202ENST00000380034 CEP164Q9UPV0 1460 aa11.45□□□□□ -0.58
TRIM5-202ENST00000380034 SOGA1O94964 1423 aa11.45□□□□□ -0.58
TRIM5-202ENST00000380034 CUX1P39880 1505 aa11.43□□□□□ -0.58
TRIM5-202ENST00000380034 TTBK1Q5TCY1 1321 aaPredicted RBP11.42□□□□□ -0.58
TRIM5-202ENST00000380034 PRXQ9BXM0 1461 aa11.4□□□□□ -0.59
TRIM5-202ENST00000380034 RUSC2Q8N2Y8 1516 aa11.38□□□□□ -0.59
TRIM5-202ENST00000380034 DIEXFQ68CQ4 756 aaKnown RBP11.37□□□□□ -0.59
TRIM5-202ENST00000380034 CEP162Q5TB80 1403 aa11.36□□□□□ -0.59
TRIM5-202ENST00000380034 CADPSQ9ULU8 1353 aa11.36□□□□□ -0.59
TRIM5-202ENST00000380034 CSRNP3Q8WYN3 585 aa11.36□□□□□ -0.59
TRIM5-202ENST00000380034 WDR97A6NE52 1622 aa11.32□□□□□ -0.6
TRIM5-202ENST00000380034 DNMBPQ6XZF7 1577 aa11.31□□□□□ -0.6
TRIM5-202ENST00000380034 DNAJC5BQ9UF47 199 aa11.28□□□□□ -0.6
TRIM5-202ENST00000380034 CCER1Q8TC90 406 aaPredicted RBP11.28□□□□□ -0.6
TRIM5-202ENST00000380034 KIF27Q86VH2 1401 aa11.26□□□□□ -0.61
TRIM5-202ENST00000380034 PDS5BQ9NTI5 1447 aa11.26□□□□□ -0.61
TRIM5-202ENST00000380034 RAPGEF2Q9Y4G8 1499 aa11.25□□□□□ -0.61
TRIM5-202ENST00000380034 ABCA10Q8WWZ4 1543 aa11.24□□□□□ -0.61
TRIM5-202ENST00000380034 KIF21AQ7Z4S6 1674 aa11.23□□□□□ -0.61
TRIM5-202ENST00000380034 VPS8Q8N3P4 1428 aa11.23□□□□□ -0.61
TRIM5-202ENST00000380034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.22□□□□□ -0.61
TRIM5-202ENST00000380034 CUL7Q14999 1698 aa11.22□□□□□ -0.61
TRIM5-202ENST00000380034 FANCD2Q9BXW9 1451 aa11.22□□□□□ -0.61
TRIM5-202ENST00000380034 MAP3K1Q13233 1512 aa11.22□□□□□ -0.61
TRIM5-202ENST00000380034 CLSPNQ9HAW4 1339 aa11.21□□□□□ -0.62
TRIM5-202ENST00000380034 WDR62O43379 1518 aa11.2□□□□□ -0.62
TRIM5-202ENST00000380034 THOC2Q8NI27 1593 aaKnown RBP11.2□□□□□ -0.62
TRIM5-202ENST00000380034 FGD5Q6ZNL6 1462 aa11.19□□□□□ -0.62
TRIM5-202ENST00000380034 FAM9AQ8IZU1 332 aaPredicted RBP11.19□□□□□ -0.62
TRIM5-202ENST00000380034 ABCA5Q8WWZ7 1642 aa11.18□□□□□ -0.62
TRIM5-202ENST00000380034 TOPBP1Q92547 1522 aa11.18□□□□□ -0.62
TRIM5-202ENST00000380034 CLIP1P30622 1438 aa11.18□□□□□ -0.62
TRIM5-202ENST00000380034 ZNF316A6NFI3 1004 aaPredicted RBP11.18□□□□□ -0.62
TRIM5-202ENST00000380034 AEBP2Q6ZN18 517 aaPredicted RBP11.17□□□□□ -0.62
TRIM5-202ENST00000380034 ARAP1Q96P48 1450 aa11.16□□□□□ -0.62
TRIM5-202ENST00000380034 MRC2Q9UBG0 1479 aa11.16□□□□□ -0.62
TRIM5-202ENST00000380034 NESP48681 1621 aa11.16□□□□□ -0.62
TRIM5-202ENST00000380034 IGF1RP08069 1367 aa11.14□□□□□ -0.63
TRIM5-202ENST00000380034 POLA1P09884 1462 aaPredicted RBP11.13□□□□□ -0.63
TRIM5-202ENST00000380034 CTTNBP2Q8WZ74 1663 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms