RNA–Protein interactions for RNA: ENST00000379922.3

NBEA-202, Transcript of neurobeachin, humanhuman

TSL 1 (best) BASIC

Gene NBEA, Length 3,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBEA-202ENST00000379922 NISCHQ9Y2I1 1504 aa16.12■□□□□ 0.17
NBEA-202ENST00000379922 CCDC180Q9P1Z9 1646 aa13.87□□□□□ -0.19
NBEA-202ENST00000379922 ZCCHC6Q5VYS8 1495 aaKnown RBP13.64□□□□□ -0.23
NBEA-202ENST00000379922 SHROOM4Q9ULL8 1493 aa13.51□□□□□ -0.25
NBEA-202ENST00000379922 DCAF1Q9Y4B6 1507 aa13.31□□□□□ -0.28
NBEA-202ENST00000379922 DCAF8L2P0C7V8 631 aa13.2□□□□□ -0.3
NBEA-202ENST00000379922 SUPT5HO00267 1087 aaKnown RBP13.19□□□□□ -0.3
NBEA-202ENST00000379922 MYO15BQ96JP2 1530 aa12.97□□□□□ -0.33
NBEA-202ENST00000379922 ABCC9O60706 1549 aa12.87□□□□□ -0.35
NBEA-202ENST00000379922 SCRIBQ14160 1630 aa12.85□□□□□ -0.35
NBEA-202ENST00000379922 CHIC1Q5VXU3 224 aa12.84□□□□□ -0.35
NBEA-202ENST00000379922 NACADO15069 1562 aa12.8□□□□□ -0.36
NBEA-202ENST00000379922 RSF1Q96T23 1441 aaPredicted RBP12.67□□□□□ -0.38
NBEA-202ENST00000379922 RB1CC1Q8TDY2 1594 aa12.6□□□□□ -0.39
NBEA-202ENST00000379922 CECR2Q9BXF3 1484 aa12.51□□□□□ -0.41
NBEA-202ENST00000379922 MROH2BQ7Z745 1585 aa12.5□□□□□ -0.41
NBEA-202ENST00000379922 WIZO95785 1651 aa12.45□□□□□ -0.42
NBEA-202ENST00000379922 UNC13AQ9UPW8 1703 aa12.44□□□□□ -0.42
NBEA-202ENST00000379922 BAZ1AQ9NRL2 1556 aaPredicted RBP12.42□□□□□ -0.42
NBEA-202ENST00000379922 LOC105371045A0A1W2PR82 267 aa12.38□□□□□ -0.43
NBEA-202ENST00000379922 TRIM41Q8WV44 630 aa12.35□□□□□ -0.43
NBEA-202ENST00000379922 SMARCA4P51532 1647 aa12.33□□□□□ -0.44
NBEA-202ENST00000379922 EIF4G1Q04637 1599 aaKnown RBP12.29□□□□□ -0.44
NBEA-202ENST00000379922 TOP2AP11388 1531 aaKnown RBP12.29□□□□□ -0.44
NBEA-202ENST00000379922 PCGF6Q9BYE7 350 aa12.28□□□□□ -0.44
NBEA-202ENST00000379922 HRCP23327 699 aa12.28□□□□□ -0.44
NBEA-202ENST00000379922 BICRAQ9NZM4 1560 aa12.23□□□□□ -0.45
NBEA-202ENST00000379922 SMARCA2P51531 1590 aa12.2□□□□□ -0.46
NBEA-202ENST00000379922 FAM9AQ8IZU1 332 aaPredicted RBP12.17□□□□□ -0.46
NBEA-202ENST00000379922 CCDC88BA6NC98 1476 aa12.17□□□□□ -0.46
NBEA-202ENST00000379922 TRIM26Q12899 539 aaPredicted RBP12.15□□□□□ -0.46
NBEA-202ENST00000379922 PEG3Q9GZU2 1588 aa12.13□□□□□ -0.47
NBEA-202ENST00000379922 PABPN1Q86U42 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
NBEA-202ENST00000379922 ABCC8Q09428 1581 aa12.09□□□□□ -0.47
NBEA-202ENST00000379922 EHMT2Q96KQ7 1210 aa12.01□□□□□ -0.49
NBEA-202ENST00000379922 ATAD2BQ9ULI0 1458 aa11.99□□□□□ -0.49
NBEA-202ENST00000379922 EEA1Q15075 1411 aa11.96□□□□□ -0.49
NBEA-202ENST00000379922 BAZ1BQ9UIG0 1483 aaKnown RBP11.96□□□□□ -0.49
NBEA-202ENST00000379922 PPARGC1BQ86YN6 1023 aaKnown RBP11.95□□□□□ -0.5
NBEA-202ENST00000379922 SOGA1O94964 1423 aa11.93□□□□□ -0.5
NBEA-202ENST00000379922 WRNQ14191 1432 aaPredicted RBP eCLIP11.92□□□□□ -0.5
NBEA-202ENST00000379922 SYNJ1O43426 1573 aa11.89□□□□□ -0.51
NBEA-202ENST00000379922 ZEB1P37275 1124 aaPredicted RBP11.88□□□□□ -0.51
NBEA-202ENST00000379922 TNIKQ9UKE5 1360 aa11.87□□□□□ -0.51
NBEA-202ENST00000379922 RUSC2Q8N2Y8 1516 aa11.87□□□□□ -0.51
NBEA-202ENST00000379922 CEP162Q5TB80 1403 aa11.86□□□□□ -0.51
NBEA-202ENST00000379922 CSRNP3Q8WYN3 585 aa11.86□□□□□ -0.51
NBEA-202ENST00000379922 GOLGA3Q08378 1498 aa11.84□□□□□ -0.51
NBEA-202ENST00000379922 HMGXB3Q12766 1538 aa11.83□□□□□ -0.51
NBEA-202ENST00000379922 KIF21BO75037 1637 aa11.82□□□□□ -0.52
NBEA-202ENST00000379922 NCAPD3P42695 1498 aa11.79□□□□□ -0.52
NBEA-202ENST00000379922 CEP164Q9UPV0 1460 aa11.79□□□□□ -0.52
NBEA-202ENST00000379922 TOP2BQ02880 1626 aa11.79□□□□□ -0.52
NBEA-202ENST00000379922 BIVM-ERCC5R4GMW8 1640 aa11.78□□□□□ -0.52
NBEA-202ENST00000379922 UBTFP17480 764 aaKnown RBP11.76□□□□□ -0.53
NBEA-202ENST00000379922 PRDM2Q13029 1718 aa11.71□□□□□ -0.54
NBEA-202ENST00000379922 CLIP1P30622 1438 aa11.67□□□□□ -0.54
NBEA-202ENST00000379922 RAPGEF2Q9Y4G8 1499 aa11.67□□□□□ -0.54
NBEA-202ENST00000379922 CFTRP13569 1480 aa11.66□□□□□ -0.54
NBEA-202ENST00000379922 CUX1P39880 1505 aa11.65□□□□□ -0.54
NBEA-202ENST00000379922 ERICH3Q5RHP9 1530 aa11.65□□□□□ -0.55
NBEA-202ENST00000379922 VPS8Q8N3P4 1428 aa11.63□□□□□ -0.55
NBEA-202ENST00000379922 TTBK1Q5TCY1 1321 aaPredicted RBP11.62□□□□□ -0.55
NBEA-202ENST00000379922 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.62□□□□□ -0.55
NBEA-202ENST00000379922 CCER1Q8TC90 406 aaPredicted RBP11.61□□□□□ -0.55
NBEA-202ENST00000379922 PRXQ9BXM0 1461 aa11.61□□□□□ -0.55
NBEA-202ENST00000379922 KIF27Q86VH2 1401 aa11.57□□□□□ -0.56
NBEA-202ENST00000379922 CC2D2AQ9P2K1 1620 aa11.55□□□□□ -0.56
NBEA-202ENST00000379922 CADPSQ9ULU8 1353 aa11.53□□□□□ -0.56
NBEA-202ENST00000379922 APLP2Q06481 763 aa11.51□□□□□ -0.57
NBEA-202ENST00000379922 ARAP1Q96P48 1450 aa11.51□□□□□ -0.57
NBEA-202ENST00000379922 RANGAP1P46060 587 aaPredicted RBP11.48□□□□□ -0.57
NBEA-202ENST00000379922 CUX2O14529 1486 aa11.47□□□□□ -0.57
NBEA-202ENST00000379922 FGD5Q6ZNL6 1462 aa11.46□□□□□ -0.58
NBEA-202ENST00000379922 FANCD2Q9BXW9 1451 aa11.43□□□□□ -0.58
NBEA-202ENST00000379922 ARHGAP35Q9NRY4 1499 aa11.42□□□□□ -0.58
NBEA-202ENST00000379922 HNRNPUL2Q1KMD3 747 aaKnown RBP11.42□□□□□ -0.58
NBEA-202ENST00000379922 IGF1RP08069 1367 aa11.42□□□□□ -0.58
NBEA-202ENST00000379922 DNMBPQ6XZF7 1577 aa11.41□□□□□ -0.58
NBEA-202ENST00000379922 CARMIL1Q5VZK9 1371 aa11.37□□□□□ -0.59
NBEA-202ENST00000379922 TOPBP1Q92547 1522 aa11.36□□□□□ -0.59
NBEA-202ENST00000379922 ABCA10Q8WWZ4 1543 aa11.35□□□□□ -0.59
NBEA-202ENST00000379922 RRBP1Q9P2E9 1410 aaKnown RBP11.35□□□□□ -0.59
NBEA-202ENST00000379922 LAMC3Q9Y6N6 1575 aa11.35□□□□□ -0.59
NBEA-202ENST00000379922 KANK4Q5T7N3 995 aaPredicted RBP11.35□□□□□ -0.59
NBEA-202ENST00000379922 MAP3K1Q13233 1512 aa11.33□□□□□ -0.59
NBEA-202ENST00000379922 NESP48681 1621 aa11.33□□□□□ -0.6
NBEA-202ENST00000379922 POLA1P09884 1462 aaPredicted RBP11.33□□□□□ -0.6
NBEA-202ENST00000379922 CUL7Q14999 1698 aa11.33□□□□□ -0.6
NBEA-202ENST00000379922 DIEXFQ68CQ4 756 aaKnown RBP11.33□□□□□ -0.6
NBEA-202ENST00000379922 TIAM1Q13009 1591 aa11.32□□□□□ -0.6
NBEA-202ENST00000379922 WDR97A6NE52 1622 aa11.32□□□□□ -0.6
NBEA-202ENST00000379922 RAD54L2Q9Y4B4 1467 aa11.31□□□□□ -0.6
NBEA-202ENST00000379922 CTTNBP2Q8WZ74 1663 aa11.3□□□□□ -0.6
NBEA-202ENST00000379922 ZNF316A6NFI3 1004 aaPredicted RBP11.3□□□□□ -0.6
NBEA-202ENST00000379922 CFAP43Q8NDM7 1665 aa11.29□□□□□ -0.6
NBEA-202ENST00000379922 CLSPNQ9HAW4 1339 aa11.28□□□□□ -0.6
NBEA-202ENST00000379922 FHAD1B1AJZ9 1412 aa11.27□□□□□ -0.6
NBEA-202ENST00000379922 CCNB3Q8WWL7 1395 aa11.27□□□□□ -0.6
NBEA-202ENST00000379922 EFCAB5A4FU69 1503 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms