RNA–Protein interactions for RNA: ENST00000378535.4

KITLG-204, Transcript of KIT ligand, humanhuman

TSL 1 (best)

Gene KITLG, Length 5,191 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KITLG-204ENST00000378535 NISCHQ9Y2I1 1504 aa5.94□□□□□ -1.46
KITLG-204ENST00000378535 ABCC9O60706 1549 aa5.34□□□□□ -1.55
KITLG-204ENST00000378535 CCDC180Q9P1Z9 1646 aa5.33□□□□□ -1.56
KITLG-204ENST00000378535 DCAF8L2P0C7V8 631 aa5.27□□□□□ -1.57
KITLG-204ENST00000378535 AEBP2Q6ZN18 517 aaPredicted RBP5.22□□□□□ -1.57
KITLG-204ENST00000378535 RB1CC1Q8TDY2 1594 aa5.15□□□□□ -1.59
KITLG-204ENST00000378535 NACADO15069 1562 aa5.1□□□□□ -1.59
KITLG-204ENST00000378535 CHIC1Q5VXU3 224 aa5.06□□□□□ -1.6
KITLG-204ENST00000378535 PABPN1Q86U42 306 aaKnown RBP eCLIP5.01□□□□□ -1.61
KITLG-204ENST00000378535 MYO15BQ96JP2 1530 aa4.99□□□□□ -1.61
KITLG-204ENST00000378535 SHROOM4Q9ULL8 1493 aa4.95□□□□□ -1.62
KITLG-204ENST00000378535 DCAF1Q9Y4B6 1507 aa4.92□□□□□ -1.62
KITLG-204ENST00000378535 ZCCHC6Q5VYS8 1495 aaKnown RBP4.9□□□□□ -1.62
KITLG-204ENST00000378535 SCRIBQ14160 1630 aa4.87□□□□□ -1.63
KITLG-204ENST00000378535 CECR2Q9BXF3 1484 aa4.85□□□□□ -1.63
KITLG-204ENST00000378535 DNAJC5BQ9UF47 199 aa4.84□□□□□ -1.64
KITLG-204ENST00000378535 POTEDQ86YR6 584 aa4.77□□□□□ -1.65
KITLG-204ENST00000378535 BICRAQ9NZM4 1560 aa4.77□□□□□ -1.65
KITLG-204ENST00000378535 CC2D2AQ9P2K1 1620 aa4.77□□□□□ -1.65
KITLG-204ENST00000378535 EIF4G1Q04637 1599 aaKnown RBP4.77□□□□□ -1.65
KITLG-204ENST00000378535 PHF23Q9BUL5 403 aaPredicted RBP4.77□□□□□ -1.65
KITLG-204ENST00000378535 ERCC6Q03468 1493 aa4.76□□□□□ -1.65
KITLG-204ENST00000378535 UNC13AQ9UPW8 1703 aa4.75□□□□□ -1.65
KITLG-204ENST00000378535 SMARCA2P51531 1590 aa4.72□□□□□ -1.65
KITLG-204ENST00000378535 BAZ1BQ9UIG0 1483 aaKnown RBP4.69□□□□□ -1.66
KITLG-204ENST00000378535 BAZ1AQ9NRL2 1556 aaPredicted RBP4.68□□□□□ -1.66
KITLG-204ENST00000378535 PDS5BQ9NTI5 1447 aa4.67□□□□□ -1.66
KITLG-204ENST00000378535 NCAPD3P42695 1498 aa4.67□□□□□ -1.66
KITLG-204ENST00000378535 CUX2O14529 1486 aa4.66□□□□□ -1.66
KITLG-204ENST00000378535 ATAD2BQ9ULI0 1458 aa4.64□□□□□ -1.67
KITLG-204ENST00000378535 HMGXB3Q12766 1538 aa4.63□□□□□ -1.67
KITLG-204ENST00000378535 SMARCA4P51532 1647 aa4.61□□□□□ -1.67
KITLG-204ENST00000378535 DNAJC5Q9H3Z4 198 aa4.61□□□□□ -1.67
KITLG-204ENST00000378535 LAMC3Q9Y6N6 1575 aa4.58□□□□□ -1.68
KITLG-204ENST00000378535 CADPSQ9ULU8 1353 aa4.58□□□□□ -1.68
KITLG-204ENST00000378535 FAM9AQ8IZU1 332 aaPredicted RBP4.57□□□□□ -1.68
KITLG-204ENST00000378535 CEP164Q9UPV0 1460 aa4.56□□□□□ -1.68
KITLG-204ENST00000378535 MRC2Q9UBG0 1479 aa4.55□□□□□ -1.68
KITLG-204ENST00000378535 OSCARQ8IYS5 282 aa4.55□□□□□ -1.68
KITLG-204ENST00000378535 TRIM41Q8WV44 630 aa4.54□□□□□ -1.68
KITLG-204ENST00000378535 ABCC8Q09428 1581 aa4.53□□□□□ -1.68
KITLG-204ENST00000378535 PEG3Q9GZU2 1588 aa4.53□□□□□ -1.68
KITLG-204ENST00000378535 MROH2BQ7Z745 1585 aa4.52□□□□□ -1.69
KITLG-204ENST00000378535 FBLN2P98095 1184 aa4.51□□□□□ -1.69
KITLG-204ENST00000378535 FANCD2Q9BXW9 1451 aa4.51□□□□□ -1.69
KITLG-204ENST00000378535 NESP48681 1621 aa4.5□□□□□ -1.69
KITLG-204ENST00000378535 TOP2AP11388 1531 aaKnown RBP4.49□□□□□ -1.69
KITLG-204ENST00000378535 SUPT5HO00267 1087 aaKnown RBP4.49□□□□□ -1.69
KITLG-204ENST00000378535 RSF1Q96T23 1441 aaPredicted RBP4.49□□□□□ -1.69
KITLG-204ENST00000378535 CHMP7Q8WUX9 453 aaPredicted RBP4.48□□□□□ -1.69
KITLG-204ENST00000378535 IFT140Q96RY7 1462 aa4.47□□□□□ -1.69
KITLG-204ENST00000378535 CFTRP13569 1480 aa4.47□□□□□ -1.69
KITLG-204ENST00000378535 TRHP20396 242 aaPredicted RBP4.46□□□□□ -1.7
KITLG-204ENST00000378535 NPM1P06748 294 aaKnown RBP eCLIP4.45□□□□□ -1.7
KITLG-204ENST00000378535 WIZO95785 1651 aa4.45□□□□□ -1.7
KITLG-204ENST00000378535 WDR62O43379 1518 aa4.45□□□□□ -1.7
KITLG-204ENST00000378535 THOC2Q8NI27 1593 aaKnown RBP4.43□□□□□ -1.7
KITLG-204ENST00000378535 KIF21AQ7Z4S6 1674 aa4.43□□□□□ -1.7
KITLG-204ENST00000378535 CCDC88BA6NC98 1476 aa4.42□□□□□ -1.7
KITLG-204ENST00000378535 SOGA1O94964 1423 aa4.42□□□□□ -1.7
KITLG-204ENST00000378535 SENP3Q9H4L4 574 aaPredicted RBP4.41□□□□□ -1.7
KITLG-204ENST00000378535 CYB5RLQ6IPT4 315 aa4.4□□□□□ -1.71
KITLG-204ENST00000378535 DNMBPQ6XZF7 1577 aa4.4□□□□□ -1.71
KITLG-204ENST00000378535 TOPBP1Q92547 1522 aa4.39□□□□□ -1.71
KITLG-204ENST00000378535 WRNQ14191 1432 aaPredicted RBP eCLIP4.38□□□□□ -1.71
KITLG-204ENST00000378535 URB2Q14146 1524 aaKnown RBP4.37□□□□□ -1.71
KITLG-204ENST00000378535 GRIN2BQ13224 1484 aa4.37□□□□□ -1.71
KITLG-204ENST00000378535 WDR97A6NE52 1622 aa4.37□□□□□ -1.71
KITLG-204ENST00000378535 SYNJ1O43426 1573 aa4.36□□□□□ -1.71
KITLG-204ENST00000378535 PRDM2Q13029 1718 aa4.36□□□□□ -1.71
KITLG-204ENST00000378535 MAGI1Q96QZ7 1491 aaPredicted RBP4.36□□□□□ -1.71
KITLG-204ENST00000378535 TDRD9Q8NDG6 1382 aaKnown RBP4.35□□□□□ -1.71
KITLG-204ENST00000378535 AQRO60306 1485 aaKnown RBP eCLIP4.34□□□□□ -1.71
KITLG-204ENST00000378535 GAPVD1Q14C86 1478 aa4.34□□□□□ -1.71
KITLG-204ENST00000378535 FGD5Q6ZNL6 1462 aa4.33□□□□□ -1.72
KITLG-204ENST00000378535 POLA1P09884 1462 aaPredicted RBP4.33□□□□□ -1.72
KITLG-204ENST00000378535 SYNJ2O15056 1496 aa4.33□□□□□ -1.72
KITLG-204ENST00000378535 SNAPC4Q5SXM2 1469 aa4.32□□□□□ -1.72
KITLG-204ENST00000378535 CARMIL2Q6F5E8 1435 aa4.31□□□□□ -1.72
KITLG-204ENST00000378535 KIF27Q86VH2 1401 aa4.31□□□□□ -1.72
KITLG-204ENST00000378535 FHAD1B1AJZ9 1412 aa4.31□□□□□ -1.72
KITLG-204ENST00000378535 ZNF608Q9ULD9 1512 aaPredicted RBP4.31□□□□□ -1.72
KITLG-204ENST00000378535 RAD54L2Q9Y4B4 1467 aa4.31□□□□□ -1.72
KITLG-204ENST00000378535 EIF4G3O43432 1585 aaKnown RBP4.31□□□□□ -1.72
KITLG-204ENST00000378535 TTBK1Q5TCY1 1321 aaPredicted RBP4.31□□□□□ -1.72
KITLG-204ENST00000378535 ARHGEF11O15085 1522 aa4.3□□□□□ -1.72
KITLG-204ENST00000378535 ABCA10Q8WWZ4 1543 aa4.28□□□□□ -1.72
KITLG-204ENST00000378535 JPH4Q96JJ6 628 aa4.28□□□□□ -1.72
KITLG-204ENST00000378535 PLPPR3Q6T4P5 718 aa4.28□□□□□ -1.72
KITLG-204ENST00000378535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.28□□□□□ -1.72
KITLG-204ENST00000378535 HNRNPUL2Q1KMD3 747 aaKnown RBP4.28□□□□□ -1.72
KITLG-204ENST00000378535 RIMBP3CA6NJZ7 1639 aa4.28□□□□□ -1.72
KITLG-204ENST00000378535 RIMBP3BA6NNM3 1639 aa4.28□□□□□ -1.72
KITLG-204ENST00000378535 RIMBP3Q9UFD9 1639 aa4.28□□□□□ -1.72
KITLG-204ENST00000378535 CUX1P39880 1505 aa4.26□□□□□ -1.73
KITLG-204ENST00000378535 FAM69CQ0P6D2 419 aa4.26□□□□□ -1.73
KITLG-204ENST00000378535 GRIN2AQ12879 1464 aa4.26□□□□□ -1.73
KITLG-204ENST00000378535 ERICH3Q5RHP9 1530 aa4.26□□□□□ -1.73
KITLG-204ENST00000378535 TARBP1Q13395 1621 aaKnown RBP4.25□□□□□ -1.73
KITLG-204ENST00000378535 PRG4Q92954 1404 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms