RNA–Protein interactions for RNA: ENST00000370803.7

PHF6-204, Transcript of PHD finger protein 6, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PHF6, Length 4,489 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF6-204ENST00000370803 NISCHQ9Y2I1 1504 aa17.74■□□□□ 0.43
PHF6-204ENST00000370803 DCAF8L2P0C7V8 631 aa16■□□□□ 0.15
PHF6-204ENST00000370803 ABCC9O60706 1549 aa15.55■□□□□ 0.08
PHF6-204ENST00000370803 CCDC180Q9P1Z9 1646 aa15.41■□□□□ 0.06
PHF6-204ENST00000370803 SHROOM4Q9ULL8 1493 aa15.16■□□□□ 0.02
PHF6-204ENST00000370803 ZCCHC6Q5VYS8 1495 aaKnown RBP14.87□□□□□ -0.03
PHF6-204ENST00000370803 RB1CC1Q8TDY2 1594 aa14.83□□□□□ -0.04
PHF6-204ENST00000370803 PABPN1Q86U42 306 aaKnown RBP eCLIP14.79□□□□□ -0.04
PHF6-204ENST00000370803 SUPT5HO00267 1087 aaKnown RBP14.74□□□□□ -0.05
PHF6-204ENST00000370803 NACADO15069 1562 aa14.73□□□□□ -0.05
PHF6-204ENST00000370803 SCRIBQ14160 1630 aa14.46□□□□□ -0.1
PHF6-204ENST00000370803 DCAF1Q9Y4B6 1507 aa14.45□□□□□ -0.1
PHF6-204ENST00000370803 MYO15BQ96JP2 1530 aa14.4□□□□□ -0.1
PHF6-204ENST00000370803 CECR2Q9BXF3 1484 aa13.92□□□□□ -0.18
PHF6-204ENST00000370803 RSF1Q96T23 1441 aaPredicted RBP13.9□□□□□ -0.18
PHF6-204ENST00000370803 CHIC1Q5VXU3 224 aa13.87□□□□□ -0.19
PHF6-204ENST00000370803 BAZ1AQ9NRL2 1556 aaPredicted RBP13.83□□□□□ -0.2
PHF6-204ENST00000370803 BAZ1BQ9UIG0 1483 aaKnown RBP13.82□□□□□ -0.2
PHF6-204ENST00000370803 BICRAQ9NZM4 1560 aa13.82□□□□□ -0.2
PHF6-204ENST00000370803 DNAJC5BQ9UF47 199 aa13.8□□□□□ -0.2
PHF6-204ENST00000370803 EIF4G1Q04637 1599 aaKnown RBP13.79□□□□□ -0.2
PHF6-204ENST00000370803 MROH2BQ7Z745 1585 aa13.78□□□□□ -0.2
PHF6-204ENST00000370803 SMARCA2P51531 1590 aa13.76□□□□□ -0.21
PHF6-204ENST00000370803 TRIM41Q8WV44 630 aa13.74□□□□□ -0.21
PHF6-204ENST00000370803 ERCC6Q03468 1493 aa13.73□□□□□ -0.21
PHF6-204ENST00000370803 UNC13AQ9UPW8 1703 aa13.72□□□□□ -0.21
PHF6-204ENST00000370803 CC2D2AQ9P2K1 1620 aa13.7□□□□□ -0.22
PHF6-204ENST00000370803 FAM9AQ8IZU1 332 aaPredicted RBP13.7□□□□□ -0.22
PHF6-204ENST00000370803 EHMT2Q96KQ7 1210 aa13.69□□□□□ -0.22
PHF6-204ENST00000370803 WIZO95785 1651 aa13.67□□□□□ -0.22
PHF6-204ENST00000370803 ATAD2BQ9ULI0 1458 aa13.64□□□□□ -0.23
PHF6-204ENST00000370803 SMARCA4P51532 1647 aa13.61□□□□□ -0.23
PHF6-204ENST00000370803 NCAPD3P42695 1498 aa13.57□□□□□ -0.24
PHF6-204ENST00000370803 PDS5BQ9NTI5 1447 aa13.54□□□□□ -0.24
PHF6-204ENST00000370803 LOC105371045A0A1W2PR82 267 aa13.53□□□□□ -0.24
PHF6-204ENST00000370803 TOP2AP11388 1531 aaKnown RBP13.47□□□□□ -0.25
PHF6-204ENST00000370803 CADPSQ9ULU8 1353 aa13.44□□□□□ -0.26
PHF6-204ENST00000370803 CCDC88BA6NC98 1476 aa13.43□□□□□ -0.26
PHF6-204ENST00000370803 FBLN2P98095 1184 aa13.43□□□□□ -0.26
PHF6-204ENST00000370803 HMGXB3Q12766 1538 aa13.43□□□□□ -0.26
PHF6-204ENST00000370803 CEP164Q9UPV0 1460 aa13.32□□□□□ -0.28
PHF6-204ENST00000370803 ABCC8Q09428 1581 aa13.28□□□□□ -0.28
PHF6-204ENST00000370803 FANCD2Q9BXW9 1451 aa13.26□□□□□ -0.29
PHF6-204ENST00000370803 UBTFP17480 764 aaKnown RBP13.25□□□□□ -0.29
PHF6-204ENST00000370803 NESP48681 1621 aa13.24□□□□□ -0.29
PHF6-204ENST00000370803 PEG3Q9GZU2 1588 aa13.22□□□□□ -0.29
PHF6-204ENST00000370803 CHMP7Q8WUX9 453 aaPredicted RBP13.22□□□□□ -0.29
PHF6-204ENST00000370803 WRNQ14191 1432 aaPredicted RBP eCLIP13.2□□□□□ -0.3
PHF6-204ENST00000370803 RANGAP1P46060 587 aaPredicted RBP13.2□□□□□ -0.3
PHF6-204ENST00000370803 LAMC3Q9Y6N6 1575 aa13.2□□□□□ -0.3
PHF6-204ENST00000370803 PCGF6Q9BYE7 350 aa13.19□□□□□ -0.3
PHF6-204ENST00000370803 TTBK1Q5TCY1 1321 aaPredicted RBP13.17□□□□□ -0.3
PHF6-204ENST00000370803 MRC2Q9UBG0 1479 aa13.16□□□□□ -0.3
PHF6-204ENST00000370803 CFTRP13569 1480 aa13.14□□□□□ -0.31
PHF6-204ENST00000370803 CSRNP3Q8WYN3 585 aa13.13□□□□□ -0.31
PHF6-204ENST00000370803 PPARGC1BQ86YN6 1023 aaKnown RBP13.11□□□□□ -0.31
PHF6-204ENST00000370803 SOGA1O94964 1423 aa13.1□□□□□ -0.31
PHF6-204ENST00000370803 ATP1B4Q9UN42 357 aaPredicted RBP13.08□□□□□ -0.32
PHF6-204ENST00000370803 APLP2Q06481 763 aa13.03□□□□□ -0.32
PHF6-204ENST00000370803 OSCARQ8IYS5 282 aa13.03□□□□□ -0.32
PHF6-204ENST00000370803 CUX2O14529 1486 aa13.03□□□□□ -0.32
PHF6-204ENST00000370803 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.02□□□□□ -0.33
PHF6-204ENST00000370803 HNRNPUL2Q1KMD3 747 aaKnown RBP13.02□□□□□ -0.33
PHF6-204ENST00000370803 NPM1P06748 294 aaKnown RBP eCLIP13.01□□□□□ -0.33
PHF6-204ENST00000370803 TDRD9Q8NDG6 1382 aaKnown RBP13.01□□□□□ -0.33
PHF6-204ENST00000370803 RUSC2Q8N2Y8 1516 aa13□□□□□ -0.33
PHF6-204ENST00000370803 EEA1Q15075 1411 aa12.99□□□□□ -0.33
PHF6-204ENST00000370803 SYNJ1O43426 1573 aa12.98□□□□□ -0.33
PHF6-204ENST00000370803 KIF27Q86VH2 1401 aa12.98□□□□□ -0.33
PHF6-204ENST00000370803 IFT140Q96RY7 1462 aa12.97□□□□□ -0.33
PHF6-204ENST00000370803 TRIM26Q12899 539 aaPredicted RBP12.96□□□□□ -0.34
PHF6-204ENST00000370803 TOPBP1Q92547 1522 aa12.92□□□□□ -0.34
PHF6-204ENST00000370803 GOLGA3Q08378 1498 aa12.91□□□□□ -0.34
PHF6-204ENST00000370803 FGD5Q6ZNL6 1462 aa12.91□□□□□ -0.34
PHF6-204ENST00000370803 DNMBPQ6XZF7 1577 aa12.88□□□□□ -0.35
PHF6-204ENST00000370803 CEP162Q5TB80 1403 aa12.88□□□□□ -0.35
PHF6-204ENST00000370803 RAD54L2Q9Y4B4 1467 aa12.86□□□□□ -0.35
PHF6-204ENST00000370803 TNIKQ9UKE5 1360 aa12.86□□□□□ -0.35
PHF6-204ENST00000370803 AQRO60306 1485 aaKnown RBP eCLIP12.86□□□□□ -0.35
PHF6-204ENST00000370803 TOP2BQ02880 1626 aa12.85□□□□□ -0.35
PHF6-204ENST00000370803 CUX1P39880 1505 aa12.85□□□□□ -0.35
PHF6-204ENST00000370803 URB2Q14146 1524 aaKnown RBP12.84□□□□□ -0.35
PHF6-204ENST00000370803 TRHP20396 242 aaPredicted RBP12.84□□□□□ -0.35
PHF6-204ENST00000370803 GAPVD1Q14C86 1478 aa12.83□□□□□ -0.35
PHF6-204ENST00000370803 KIF21AQ7Z4S6 1674 aa12.82□□□□□ -0.36
PHF6-204ENST00000370803 POLA1P09884 1462 aaPredicted RBP12.82□□□□□ -0.36
PHF6-204ENST00000370803 GRIN2BQ13224 1484 aa12.81□□□□□ -0.36
PHF6-204ENST00000370803 CARMIL1Q5VZK9 1371 aa12.8□□□□□ -0.36
PHF6-204ENST00000370803 CLIP1P30622 1438 aa12.8□□□□□ -0.36
PHF6-204ENST00000370803 P3H3Q8IVL6 736 aa12.8□□□□□ -0.36
PHF6-204ENST00000370803 RAPGEF2Q9Y4G8 1499 aa12.79□□□□□ -0.36
PHF6-204ENST00000370803 MYT1LQ9UL68 1186 aa12.79□□□□□ -0.36
PHF6-204ENST00000370803 WDR62O43379 1518 aa12.79□□□□□ -0.36
PHF6-204ENST00000370803 CYB5RLQ6IPT4 315 aa12.77□□□□□ -0.36
PHF6-204ENST00000370803 BIVM-ERCC5R4GMW8 1640 aa12.75□□□□□ -0.37
PHF6-204ENST00000370803 CARMIL2Q6F5E8 1435 aa12.73□□□□□ -0.37
PHF6-204ENST00000370803 ARID3CA6NKF2 412 aa12.72□□□□□ -0.37
PHF6-204ENST00000370803 SNAPC4Q5SXM2 1469 aa12.72□□□□□ -0.37
PHF6-204ENST00000370803 HRCP23327 699 aa12.71□□□□□ -0.37
PHF6-204ENST00000370803 CDK11AQ9UQ88 783 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms