RNA–Protein interactions for RNA: ENST00000370115.1

VCAM1-203, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene VCAM1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-203ENST00000370115 NISCHQ9Y2I1 1504 aa10.28□□□□□ -0.76
VCAM1-203ENST00000370115 POTEDQ86YR6 584 aa9.42□□□□□ -0.9
VCAM1-203ENST00000370115 AEBP2Q6ZN18 517 aaPredicted RBP9.34□□□□□ -0.91
VCAM1-203ENST00000370115 DNAJC5Q9H3Z4 198 aa8.92□□□□□ -0.98
VCAM1-203ENST00000370115 ABCC9O60706 1549 aa8.91□□□□□ -0.98
VCAM1-203ENST00000370115 DNAJC5BQ9UF47 199 aa8.83□□□□□ -1
VCAM1-203ENST00000370115 SHROOM4Q9ULL8 1493 aa8.76□□□□□ -1.01
VCAM1-203ENST00000370115 CCDC180Q9P1Z9 1646 aa8.75□□□□□ -1.01
VCAM1-203ENST00000370115 CHIC1Q5VXU3 224 aa8.73□□□□□ -1.01
VCAM1-203ENST00000370115 ZCCHC6Q5VYS8 1495 aaKnown RBP8.7□□□□□ -1.02
VCAM1-203ENST00000370115 SUPT5HO00267 1087 aaKnown RBP8.59□□□□□ -1.03
VCAM1-203ENST00000370115 DCAF8L2P0C7V8 631 aa8.49□□□□□ -1.05
VCAM1-203ENST00000370115 DCAF1Q9Y4B6 1507 aa8.43□□□□□ -1.06
VCAM1-203ENST00000370115 MYO15BQ96JP2 1530 aa8.36□□□□□ -1.07
VCAM1-203ENST00000370115 RB1CC1Q8TDY2 1594 aa8.29□□□□□ -1.08
VCAM1-203ENST00000370115 SCRIBQ14160 1630 aa8.2□□□□□ -1.1
VCAM1-203ENST00000370115 PABPN1Q86U42 306 aaKnown RBP eCLIP8.19□□□□□ -1.1
VCAM1-203ENST00000370115 RSF1Q96T23 1441 aaPredicted RBP8.13□□□□□ -1.11
VCAM1-203ENST00000370115 LOC105371045A0A1W2PR82 267 aa8.12□□□□□ -1.11
VCAM1-203ENST00000370115 HRCP23327 699 aa8.11□□□□□ -1.11
VCAM1-203ENST00000370115 PCGF6Q9BYE7 350 aa8.11□□□□□ -1.11
VCAM1-203ENST00000370115 NACADO15069 1562 aa8.11□□□□□ -1.11
VCAM1-203ENST00000370115 CECR2Q9BXF3 1484 aa8.1□□□□□ -1.11
VCAM1-203ENST00000370115 UNC13AQ9UPW8 1703 aa8.05□□□□□ -1.12
VCAM1-203ENST00000370115 BICRAQ9NZM4 1560 aa8.04□□□□□ -1.12
VCAM1-203ENST00000370115 CC2D2AQ9P2K1 1620 aa8.04□□□□□ -1.12
VCAM1-203ENST00000370115 MROH2BQ7Z745 1585 aa8□□□□□ -1.13
VCAM1-203ENST00000370115 TRIM41Q8WV44 630 aa8□□□□□ -1.13
VCAM1-203ENST00000370115 WIZO95785 1651 aa7.98□□□□□ -1.13
VCAM1-203ENST00000370115 CUX2O14529 1486 aa7.96□□□□□ -1.13
VCAM1-203ENST00000370115 PPARGC1BQ86YN6 1023 aaKnown RBP7.96□□□□□ -1.14
VCAM1-203ENST00000370115 TRIM26Q12899 539 aaPredicted RBP7.95□□□□□ -1.14
VCAM1-203ENST00000370115 FAM9AQ8IZU1 332 aaPredicted RBP7.93□□□□□ -1.14
VCAM1-203ENST00000370115 BAZ1AQ9NRL2 1556 aaPredicted RBP7.92□□□□□ -1.14
VCAM1-203ENST00000370115 EIF4G1Q04637 1599 aaKnown RBP7.89□□□□□ -1.15
VCAM1-203ENST00000370115 EHMT2Q96KQ7 1210 aa7.87□□□□□ -1.15
VCAM1-203ENST00000370115 SMARCA4P51532 1647 aa7.84□□□□□ -1.15
VCAM1-203ENST00000370115 TOP2AP11388 1531 aaKnown RBP7.83□□□□□ -1.16
VCAM1-203ENST00000370115 PHF23Q9BUL5 403 aaPredicted RBP7.8□□□□□ -1.16
VCAM1-203ENST00000370115 SMARCA2P51531 1590 aa7.79□□□□□ -1.16
VCAM1-203ENST00000370115 ABCC8Q09428 1581 aa7.79□□□□□ -1.16
VCAM1-203ENST00000370115 CCDC88BA6NC98 1476 aa7.79□□□□□ -1.16
VCAM1-203ENST00000370115 ZEB1P37275 1124 aaPredicted RBP7.76□□□□□ -1.17
VCAM1-203ENST00000370115 ERCC6Q03468 1493 aa7.75□□□□□ -1.17
VCAM1-203ENST00000370115 ILDR1Q86SU0 546 aaPredicted RBP7.74□□□□□ -1.17
VCAM1-203ENST00000370115 SENP3Q9H4L4 574 aaPredicted RBP7.72□□□□□ -1.17
VCAM1-203ENST00000370115 SOGA1O94964 1423 aa7.7□□□□□ -1.18
VCAM1-203ENST00000370115 PEG3Q9GZU2 1588 aa7.69□□□□□ -1.18
VCAM1-203ENST00000370115 RUSC2Q8N2Y8 1516 aa7.68□□□□□ -1.18
VCAM1-203ENST00000370115 CEP162Q5TB80 1403 aa7.67□□□□□ -1.18
VCAM1-203ENST00000370115 WRNQ14191 1432 aaPredicted RBP eCLIP7.66□□□□□ -1.18
VCAM1-203ENST00000370115 EEA1Q15075 1411 aa7.65□□□□□ -1.18
VCAM1-203ENST00000370115 TNIKQ9UKE5 1360 aa7.65□□□□□ -1.19
VCAM1-203ENST00000370115 CSRNP3Q8WYN3 585 aa7.64□□□□□ -1.19
VCAM1-203ENST00000370115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.64□□□□□ -1.19
VCAM1-203ENST00000370115 SYNJ1O43426 1573 aa7.62□□□□□ -1.19
VCAM1-203ENST00000370115 ATAD2BQ9ULI0 1458 aa7.61□□□□□ -1.19
VCAM1-203ENST00000370115 TTBK1Q5TCY1 1321 aaPredicted RBP7.61□□□□□ -1.19
VCAM1-203ENST00000370115 UBTFP17480 764 aaKnown RBP7.61□□□□□ -1.19
VCAM1-203ENST00000370115 GOLGA3Q08378 1498 aa7.61□□□□□ -1.19
VCAM1-203ENST00000370115 CCER1Q8TC90 406 aaPredicted RBP7.6□□□□□ -1.19
VCAM1-203ENST00000370115 BAZ1BQ9UIG0 1483 aaKnown RBP7.59□□□□□ -1.19
VCAM1-203ENST00000370115 KIF21BO75037 1637 aa7.57□□□□□ -1.2
VCAM1-203ENST00000370115 CEP164Q9UPV0 1460 aa7.56□□□□□ -1.2
VCAM1-203ENST00000370115 THOC2Q8NI27 1593 aaKnown RBP7.56□□□□□ -1.2
VCAM1-203ENST00000370115 TOP2BQ02880 1626 aa7.53□□□□□ -1.2
VCAM1-203ENST00000370115 CLIP1P30622 1438 aa7.52□□□□□ -1.21
VCAM1-203ENST00000370115 RAPGEF2Q9Y4G8 1499 aa7.52□□□□□ -1.21
VCAM1-203ENST00000370115 BIVM-ERCC5R4GMW8 1640 aa7.51□□□□□ -1.21
VCAM1-203ENST00000370115 SCAF1Q9H7N4 1312 aaKnown RBP7.49□□□□□ -1.21
VCAM1-203ENST00000370115 VPS8Q8N3P4 1428 aa7.49□□□□□ -1.21
VCAM1-203ENST00000370115 NCAPD3P42695 1498 aa7.49□□□□□ -1.21
VCAM1-203ENST00000370115 NESP48681 1621 aa7.49□□□□□ -1.21
VCAM1-203ENST00000370115 OSCARQ8IYS5 282 aa7.48□□□□□ -1.21
VCAM1-203ENST00000370115 HMGXB3Q12766 1538 aa7.47□□□□□ -1.21
VCAM1-203ENST00000370115 DIEXFQ68CQ4 756 aaKnown RBP7.47□□□□□ -1.21
VCAM1-203ENST00000370115 RANGAP1P46060 587 aaPredicted RBP7.46□□□□□ -1.21
VCAM1-203ENST00000370115 HNRNPUL2Q1KMD3 747 aaKnown RBP7.45□□□□□ -1.22
VCAM1-203ENST00000370115 CUX1P39880 1505 aa7.44□□□□□ -1.22
VCAM1-203ENST00000370115 ERICH3Q5RHP9 1530 aa7.44□□□□□ -1.22
VCAM1-203ENST00000370115 PRXQ9BXM0 1461 aa7.44□□□□□ -1.22
VCAM1-203ENST00000370115 APLP2Q06481 763 aa7.43□□□□□ -1.22
VCAM1-203ENST00000370115 RIMBP3CA6NJZ7 1639 aa7.43□□□□□ -1.22
VCAM1-203ENST00000370115 RIMBP3BA6NNM3 1639 aa7.43□□□□□ -1.22
VCAM1-203ENST00000370115 RIMBP3Q9UFD9 1639 aa7.43□□□□□ -1.22
VCAM1-203ENST00000370115 ACIN1Q9UKV3 1341 aaKnown RBP7.41□□□□□ -1.22
VCAM1-203ENST00000370115 CFTRP13569 1480 aa7.41□□□□□ -1.22
VCAM1-203ENST00000370115 ARAP1Q96P48 1450 aa7.41□□□□□ -1.22
VCAM1-203ENST00000370115 PRDM2Q13029 1718 aa7.41□□□□□ -1.22
VCAM1-203ENST00000370115 ZNF316A6NFI3 1004 aaPredicted RBP7.41□□□□□ -1.22
VCAM1-203ENST00000370115 NEUROD1Q13562 356 aa7.41□□□□□ -1.22
VCAM1-203ENST00000370115 TRHP20396 242 aaPredicted RBP7.4□□□□□ -1.22
VCAM1-203ENST00000370115 LAMC3Q9Y6N6 1575 aa7.4□□□□□ -1.22
VCAM1-203ENST00000370115 KIF27Q86VH2 1401 aa7.39□□□□□ -1.23
VCAM1-203ENST00000370115 SOCS7O14512 581 aa7.39□□□□□ -1.23
VCAM1-203ENST00000370115 KIF21AQ7Z4S6 1674 aa7.38□□□□□ -1.23
VCAM1-203ENST00000370115 PDS5BQ9NTI5 1447 aa7.38□□□□□ -1.23
VCAM1-203ENST00000370115 PELP1Q8IZL8 1130 aaKnown RBP7.37□□□□□ -1.23
VCAM1-203ENST00000370115 KANK4Q5T7N3 995 aaPredicted RBP7.37□□□□□ -1.23
VCAM1-203ENST00000370115 FOXD1Q16676 465 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms