RNA–Protein interactions for RNA: ENST00000369315.5

CASP7-202, Transcript of caspase 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CASP7, Length 2,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7-202ENST00000369315 NISCHQ9Y2I1 1504 aa23.67■■□□□ 1.38
CASP7-202ENST00000369315 CCDC180Q9P1Z9 1646 aa20.3■□□□□ 0.84
CASP7-202ENST00000369315 ZCCHC6Q5VYS8 1495 aaKnown RBP20.01■□□□□ 0.79
CASP7-202ENST00000369315 SHROOM4Q9ULL8 1493 aa19.9■□□□□ 0.78
CASP7-202ENST00000369315 DCAF8L2P0C7V8 631 aa19.53■□□□□ 0.72
CASP7-202ENST00000369315 DCAF1Q9Y4B6 1507 aa19.48■□□□□ 0.71
CASP7-202ENST00000369315 SUPT5HO00267 1087 aaKnown RBP19.4■□□□□ 0.7
CASP7-202ENST00000369315 MYO15BQ96JP2 1530 aa19.01■□□□□ 0.63
CASP7-202ENST00000369315 SCRIBQ14160 1630 aa18.91■□□□□ 0.62
CASP7-202ENST00000369315 ABCC9O60706 1549 aa18.87■□□□□ 0.61
CASP7-202ENST00000369315 CHIC1Q5VXU3 224 aa18.8■□□□□ 0.6
CASP7-202ENST00000369315 NACADO15069 1562 aa18.79■□□□□ 0.6
CASP7-202ENST00000369315 RSF1Q96T23 1441 aaPredicted RBP18.62■□□□□ 0.57
CASP7-202ENST00000369315 RB1CC1Q8TDY2 1594 aa18.52■□□□□ 0.56
CASP7-202ENST00000369315 CECR2Q9BXF3 1484 aa18.43■□□□□ 0.54
CASP7-202ENST00000369315 MROH2BQ7Z745 1585 aa18.37■□□□□ 0.53
CASP7-202ENST00000369315 WIZO95785 1651 aa18.26■□□□□ 0.51
CASP7-202ENST00000369315 BAZ1AQ9NRL2 1556 aaPredicted RBP18.22■□□□□ 0.51
CASP7-202ENST00000369315 UNC13AQ9UPW8 1703 aa18.21■□□□□ 0.51
CASP7-202ENST00000369315 LOC105371045A0A1W2PR82 267 aa18.18■□□□□ 0.5
CASP7-202ENST00000369315 TRIM41Q8WV44 630 aa18.12■□□□□ 0.49
CASP7-202ENST00000369315 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
CASP7-202ENST00000369315 TOP2AP11388 1531 aaKnown RBP18.02■□□□□ 0.48
CASP7-202ENST00000369315 BICRAQ9NZM4 1560 aa18■□□□□ 0.47
CASP7-202ENST00000369315 EIF4G1Q04637 1599 aaKnown RBP17.98■□□□□ 0.47
CASP7-202ENST00000369315 PABPN1Q86U42 306 aaKnown RBP eCLIP17.95■□□□□ 0.46
CASP7-202ENST00000369315 PCGF6Q9BYE7 350 aa17.94■□□□□ 0.46
CASP7-202ENST00000369315 FAM9AQ8IZU1 332 aaPredicted RBP17.91■□□□□ 0.46
CASP7-202ENST00000369315 SMARCA2P51531 1590 aa17.89■□□□□ 0.45
CASP7-202ENST00000369315 CCDC88BA6NC98 1476 aa17.89■□□□□ 0.45
CASP7-202ENST00000369315 HRCP23327 699 aa17.83■□□□□ 0.45
CASP7-202ENST00000369315 PEG3Q9GZU2 1588 aa17.78■□□□□ 0.44
CASP7-202ENST00000369315 ABCC8Q09428 1581 aa17.75■□□□□ 0.43
CASP7-202ENST00000369315 EHMT2Q96KQ7 1210 aa17.72■□□□□ 0.43
CASP7-202ENST00000369315 TRIM26Q12899 539 aaPredicted RBP17.71■□□□□ 0.43
CASP7-202ENST00000369315 ATAD2BQ9ULI0 1458 aa17.66■□□□□ 0.42
CASP7-202ENST00000369315 BAZ1BQ9UIG0 1483 aaKnown RBP17.6■□□□□ 0.41
CASP7-202ENST00000369315 SOGA1O94964 1423 aa17.53■□□□□ 0.4
CASP7-202ENST00000369315 WRNQ14191 1432 aaPredicted RBP eCLIP17.5■□□□□ 0.39
CASP7-202ENST00000369315 EEA1Q15075 1411 aa17.48■□□□□ 0.39
CASP7-202ENST00000369315 RUSC2Q8N2Y8 1516 aa17.45■□□□□ 0.38
CASP7-202ENST00000369315 PPARGC1BQ86YN6 1023 aaKnown RBP17.45■□□□□ 0.38
CASP7-202ENST00000369315 SYNJ1O43426 1573 aa17.44■□□□□ 0.38
CASP7-202ENST00000369315 CSRNP3Q8WYN3 585 aa17.4■□□□□ 0.38
CASP7-202ENST00000369315 HMGXB3Q12766 1538 aa17.38■□□□□ 0.37
CASP7-202ENST00000369315 TNIKQ9UKE5 1360 aa17.37■□□□□ 0.37
CASP7-202ENST00000369315 CEP162Q5TB80 1403 aa17.37■□□□□ 0.37
CASP7-202ENST00000369315 NCAPD3P42695 1498 aa17.37■□□□□ 0.37
CASP7-202ENST00000369315 GOLGA3Q08378 1498 aa17.33■□□□□ 0.36
CASP7-202ENST00000369315 UBTFP17480 764 aaKnown RBP17.28■□□□□ 0.36
CASP7-202ENST00000369315 TOP2BQ02880 1626 aa17.26■□□□□ 0.35
CASP7-202ENST00000369315 CEP164Q9UPV0 1460 aa17.26■□□□□ 0.35
CASP7-202ENST00000369315 KIF21BO75037 1637 aa17.26■□□□□ 0.35
CASP7-202ENST00000369315 ZEB1P37275 1124 aaPredicted RBP17.25■□□□□ 0.35
CASP7-202ENST00000369315 BIVM-ERCC5R4GMW8 1640 aa17.22■□□□□ 0.35
CASP7-202ENST00000369315 CFTRP13569 1480 aa17.16■□□□□ 0.34
CASP7-202ENST00000369315 RAPGEF2Q9Y4G8 1499 aa17.13■□□□□ 0.33
CASP7-202ENST00000369315 CUX1P39880 1505 aa17.13■□□□□ 0.33
CASP7-202ENST00000369315 TTBK1Q5TCY1 1321 aaPredicted RBP17.11■□□□□ 0.33
CASP7-202ENST00000369315 CLIP1P30622 1438 aa17.1■□□□□ 0.33
CASP7-202ENST00000369315 PRDM2Q13029 1718 aa17.06■□□□□ 0.32
CASP7-202ENST00000369315 CC2D2AQ9P2K1 1620 aa17.03■□□□□ 0.32
CASP7-202ENST00000369315 ERICH3Q5RHP9 1530 aa17.02■□□□□ 0.32
CASP7-202ENST00000369315 PRXQ9BXM0 1461 aa17.02■□□□□ 0.32
CASP7-202ENST00000369315 VPS8Q8N3P4 1428 aa17.01■□□□□ 0.31
CASP7-202ENST00000369315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17■□□□□ 0.31
CASP7-202ENST00000369315 KIF27Q86VH2 1401 aa16.99■□□□□ 0.31
CASP7-202ENST00000369315 CADPSQ9ULU8 1353 aa16.99■□□□□ 0.31
CASP7-202ENST00000369315 CCER1Q8TC90 406 aaPredicted RBP16.96■□□□□ 0.31
CASP7-202ENST00000369315 RANGAP1P46060 587 aaPredicted RBP16.95■□□□□ 0.3
CASP7-202ENST00000369315 ARAP1Q96P48 1450 aa16.87■□□□□ 0.29
CASP7-202ENST00000369315 APLP2Q06481 763 aa16.86■□□□□ 0.29
CASP7-202ENST00000369315 CUX2O14529 1486 aa16.86■□□□□ 0.29
CASP7-202ENST00000369315 FGD5Q6ZNL6 1462 aa16.86■□□□□ 0.29
CASP7-202ENST00000369315 FANCD2Q9BXW9 1451 aa16.83■□□□□ 0.29
CASP7-202ENST00000369315 IGF1RP08069 1367 aa16.8■□□□□ 0.28
CASP7-202ENST00000369315 NESP48681 1621 aa16.75■□□□□ 0.27
CASP7-202ENST00000369315 DNMBPQ6XZF7 1577 aa16.75■□□□□ 0.27
CASP7-202ENST00000369315 ARHGAP35Q9NRY4 1499 aa16.75■□□□□ 0.27
CASP7-202ENST00000369315 HNRNPUL2Q1KMD3 747 aaKnown RBP16.75■□□□□ 0.27
CASP7-202ENST00000369315 AEBP2Q6ZN18 517 aaPredicted RBP16.74■□□□□ 0.27
CASP7-202ENST00000369315 CARMIL1Q5VZK9 1371 aa16.73■□□□□ 0.27
CASP7-202ENST00000369315 TOPBP1Q92547 1522 aa16.71■□□□□ 0.27
CASP7-202ENST00000369315 POLA1P09884 1462 aaPredicted RBP16.68■□□□□ 0.26
CASP7-202ENST00000369315 RAD54L2Q9Y4B4 1467 aa16.68■□□□□ 0.26
CASP7-202ENST00000369315 KANK4Q5T7N3 995 aaPredicted RBP16.67■□□□□ 0.26
CASP7-202ENST00000369315 LAMC3Q9Y6N6 1575 aa16.67■□□□□ 0.26
CASP7-202ENST00000369315 ABCA10Q8WWZ4 1543 aa16.67■□□□□ 0.26
CASP7-202ENST00000369315 URB2Q14146 1524 aaKnown RBP16.61■□□□□ 0.25
CASP7-202ENST00000369315 RRBP1Q9P2E9 1410 aaKnown RBP16.58■□□□□ 0.25
CASP7-202ENST00000369315 CUL7Q14999 1698 aa16.57■□□□□ 0.24
CASP7-202ENST00000369315 WDR97A6NE52 1622 aa16.56■□□□□ 0.24
CASP7-202ENST00000369315 DNAJC5BQ9UF47 199 aa16.56■□□□□ 0.24
CASP7-202ENST00000369315 TIAM1Q13009 1591 aa16.55■□□□□ 0.24
CASP7-202ENST00000369315 PDS5BQ9NTI5 1447 aa16.55■□□□□ 0.24
CASP7-202ENST00000369315 MAP3K1Q13233 1512 aa16.54■□□□□ 0.24
CASP7-202ENST00000369315 CCNB3Q8WWL7 1395 aa16.51■□□□□ 0.23
CASP7-202ENST00000369315 FHAD1B1AJZ9 1412 aa16.51■□□□□ 0.23
CASP7-202ENST00000369315 DIEXFQ68CQ4 756 aaKnown RBP16.5■□□□□ 0.23
CASP7-202ENST00000369315 ABCA5Q8WWZ7 1642 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms