RNA–Protein interactions for RNA: ENST00000364291.1

RN7SKP10-201, Transcript of RNA, 7SK small nuclear pseudogene 10, humanhuman

BASIC

Gene RN7SKP10, Length 325 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP10-201ENST00000364291 NISCHQ9Y2I1 1504 aa19.46■□□□□ 0.71
RN7SKP10-201ENST00000364291 ABCC9O60706 1549 aa19.1■□□□□ 0.65
RN7SKP10-201ENST00000364291 DNAJC5BQ9UF47 199 aa19.01■□□□□ 0.63
RN7SKP10-201ENST00000364291 DNAJC5Q9H3Z4 198 aa18.23■□□□□ 0.51
RN7SKP10-201ENST00000364291 CCDC180Q9P1Z9 1646 aa17.83■□□□□ 0.44
RN7SKP10-201ENST00000364291 PABPN1Q86U42 306 aaKnown RBP eCLIP17.58■□□□□ 0.4
RN7SKP10-201ENST00000364291 RB1CC1Q8TDY2 1594 aa17.55■□□□□ 0.4
RN7SKP10-201ENST00000364291 CECR2Q9BXF3 1484 aa17.28■□□□□ 0.36
RN7SKP10-201ENST00000364291 UNC13AQ9UPW8 1703 aa17.27■□□□□ 0.36
RN7SKP10-201ENST00000364291 BICRAQ9NZM4 1560 aa17.17■□□□□ 0.34
RN7SKP10-201ENST00000364291 CC2D2AQ9P2K1 1620 aa17.17■□□□□ 0.34
RN7SKP10-201ENST00000364291 NACADO15069 1562 aa17.11■□□□□ 0.33
RN7SKP10-201ENST00000364291 TRIM41Q8WV44 630 aa17.01■□□□□ 0.31
RN7SKP10-201ENST00000364291 CUX2O14529 1486 aa16.86■□□□□ 0.29
RN7SKP10-201ENST00000364291 DCAF8L2P0C7V8 631 aa16.83■□□□□ 0.28
RN7SKP10-201ENST00000364291 EIF4G1Q04637 1599 aaKnown RBP16.81■□□□□ 0.28
RN7SKP10-201ENST00000364291 SHROOM4Q9ULL8 1493 aa16.65■□□□□ 0.26
RN7SKP10-201ENST00000364291 ERCC6Q03468 1493 aa16.52■□□□□ 0.23
RN7SKP10-201ENST00000364291 MYO15BQ96JP2 1530 aa16.43■□□□□ 0.22
RN7SKP10-201ENST00000364291 ZCCHC6Q5VYS8 1495 aaKnown RBP16.36■□□□□ 0.21
RN7SKP10-201ENST00000364291 SCRIBQ14160 1630 aa16.27■□□□□ 0.2
RN7SKP10-201ENST00000364291 AEBP2Q6ZN18 517 aaPredicted RBP16.25■□□□□ 0.19
RN7SKP10-201ENST00000364291 THOC2Q8NI27 1593 aaKnown RBP16.14■□□□□ 0.17
RN7SKP10-201ENST00000364291 NESP48681 1621 aa16.08■□□□□ 0.17
RN7SKP10-201ENST00000364291 DCAF1Q9Y4B6 1507 aa16.06■□□□□ 0.16
RN7SKP10-201ENST00000364291 SMARCA2P51531 1590 aa15.95■□□□□ 0.14
RN7SKP10-201ENST00000364291 BAZ1AQ9NRL2 1556 aaPredicted RBP15.94■□□□□ 0.14
RN7SKP10-201ENST00000364291 RIMBP3CA6NJZ7 1639 aa15.9■□□□□ 0.14
RN7SKP10-201ENST00000364291 RIMBP3BA6NNM3 1639 aa15.9■□□□□ 0.14
RN7SKP10-201ENST00000364291 RIMBP3Q9UFD9 1639 aa15.9■□□□□ 0.14
RN7SKP10-201ENST00000364291 ILDR1Q86SU0 546 aaPredicted RBP15.87■□□□□ 0.13
RN7SKP10-201ENST00000364291 TRHP20396 242 aaPredicted RBP15.85■□□□□ 0.13
RN7SKP10-201ENST00000364291 OSCARQ8IYS5 282 aa15.85■□□□□ 0.13
RN7SKP10-201ENST00000364291 KIF21AQ7Z4S6 1674 aa15.83■□□□□ 0.13
RN7SKP10-201ENST00000364291 NCAPD3P42695 1498 aa15.82■□□□□ 0.12
RN7SKP10-201ENST00000364291 ARHGEF11O15085 1522 aa15.7■□□□□ 0.1
RN7SKP10-201ENST00000364291 LAMC3Q9Y6N6 1575 aa15.66■□□□□ 0.1
RN7SKP10-201ENST00000364291 ATAD2BQ9ULI0 1458 aa15.65■□□□□ 0.1
RN7SKP10-201ENST00000364291 CYB5RLQ6IPT4 315 aa15.63■□□□□ 0.09
RN7SKP10-201ENST00000364291 HMGXB3Q12766 1538 aa15.61■□□□□ 0.09
RN7SKP10-201ENST00000364291 WDR62O43379 1518 aa15.59■□□□□ 0.09
RN7SKP10-201ENST00000364291 PDS5BQ9NTI5 1447 aa15.59■□□□□ 0.09
RN7SKP10-201ENST00000364291 MRC2Q9UBG0 1479 aa15.59■□□□□ 0.09
RN7SKP10-201ENST00000364291 ARAP1Q96P48 1450 aa15.49■□□□□ 0.07
RN7SKP10-201ENST00000364291 SUPT5HO00267 1087 aaKnown RBP15.49■□□□□ 0.07
RN7SKP10-201ENST00000364291 BAZ1BQ9UIG0 1483 aaKnown RBP15.42■□□□□ 0.06
RN7SKP10-201ENST00000364291 SMARCA4P51532 1647 aa15.35■□□□□ 0.05
RN7SKP10-201ENST00000364291 CADPSQ9ULU8 1353 aa15.28■□□□□ 0.04
RN7SKP10-201ENST00000364291 CEP164Q9UPV0 1460 aa15.27■□□□□ 0.04
RN7SKP10-201ENST00000364291 ZNF608Q9ULD9 1512 aaPredicted RBP15.17■□□□□ 0.02
RN7SKP10-201ENST00000364291 FANCD2Q9BXW9 1451 aa15.16■□□□□ 0.02
RN7SKP10-201ENST00000364291 CHD1O14646 1710 aa15.16■□□□□ 0.02
RN7SKP10-201ENST00000364291 URB2Q14146 1524 aaKnown RBP15.15■□□□□ 0.02
RN7SKP10-201ENST00000364291 RSF1Q96T23 1441 aaPredicted RBP15.15■□□□□ 0.02
RN7SKP10-201ENST00000364291 PEG3Q9GZU2 1588 aa15.15■□□□□ 0.02
RN7SKP10-201ENST00000364291 KDM4FA0A1W2PPD8 638 aa15.09■□□□□ 0.01
RN7SKP10-201ENST00000364291 MROH2BQ7Z745 1585 aa15.04■□□□□ -0
RN7SKP10-201ENST00000364291 EIF4G3O43432 1585 aaKnown RBP15.02□□□□□ -0.01
RN7SKP10-201ENST00000364291 IFT140Q96RY7 1462 aa14.99□□□□□ -0.01
RN7SKP10-201ENST00000364291 LMTK3Q96Q04 1460 aa14.98□□□□□ -0.01
RN7SKP10-201ENST00000364291 FBLN2P98095 1184 aa14.98□□□□□ -0.01
RN7SKP10-201ENST00000364291 WIZO95785 1651 aa14.97□□□□□ -0.01
RN7SKP10-201ENST00000364291 ERCC6L2Q5T890 1561 aa14.94□□□□□ -0.02
RN7SKP10-201ENST00000364291 FBXO41Q8TF61 875 aa14.94□□□□□ -0.02
RN7SKP10-201ENST00000364291 CLASP1Q7Z460 1538 aa14.92□□□□□ -0.02
RN7SKP10-201ENST00000364291 HECW2Q9P2P5 1572 aa14.9□□□□□ -0.02
RN7SKP10-201ENST00000364291 KIF13AQ9H1H9 1805 aa14.88□□□□□ -0.03
RN7SKP10-201ENST00000364291 SOCS7O14512 581 aa14.87□□□□□ -0.03
RN7SKP10-201ENST00000364291 AQRO60306 1485 aaKnown RBP eCLIP14.87□□□□□ -0.03
RN7SKP10-201ENST00000364291 CFTRP13569 1480 aa14.87□□□□□ -0.03
RN7SKP10-201ENST00000364291 CHIC1Q5VXU3 224 aa14.85□□□□□ -0.03
RN7SKP10-201ENST00000364291 ILDR2Q71H61 639 aa14.85□□□□□ -0.03
RN7SKP10-201ENST00000364291 GAPVD1Q14C86 1478 aa14.84□□□□□ -0.03
RN7SKP10-201ENST00000364291 TOP2AP11388 1531 aaKnown RBP14.8□□□□□ -0.04
RN7SKP10-201ENST00000364291 SYNJ1O43426 1573 aa14.75□□□□□ -0.05
RN7SKP10-201ENST00000364291 TOPBP1Q92547 1522 aa14.75□□□□□ -0.05
RN7SKP10-201ENST00000364291 TARBP1Q13395 1621 aaKnown RBP14.73□□□□□ -0.05
RN7SKP10-201ENST00000364291 KDM6BO15054 1643 aa14.7□□□□□ -0.06
RN7SKP10-201ENST00000364291 SYNJ2O15056 1496 aa14.69□□□□□ -0.06
RN7SKP10-201ENST00000364291 ADGRL1O94910 1474 aa14.69□□□□□ -0.06
RN7SKP10-201ENST00000364291 SNAPC4Q5SXM2 1469 aa14.68□□□□□ -0.06
RN7SKP10-201ENST00000364291 PRDM2Q13029 1718 aa14.66□□□□□ -0.06
RN7SKP10-201ENST00000364291 DISP3Q9P2K9 1392 aa14.64□□□□□ -0.07
RN7SKP10-201ENST00000364291 CCDC88BA6NC98 1476 aa14.63□□□□□ -0.07
RN7SKP10-201ENST00000364291 CHMP7Q8WUX9 453 aaPredicted RBP14.62□□□□□ -0.07
RN7SKP10-201ENST00000364291 FAM69CQ0P6D2 419 aa14.59□□□□□ -0.07
RN7SKP10-201ENST00000364291 DNMBPQ6XZF7 1577 aa14.57□□□□□ -0.08
RN7SKP10-201ENST00000364291 TDRD9Q8NDG6 1382 aaKnown RBP14.57□□□□□ -0.08
RN7SKP10-201ENST00000364291 ABCC10Q5T3U5 1492 aa14.54□□□□□ -0.08
RN7SKP10-201ENST00000364291 TSPOAP1O95153 1857 aa14.54□□□□□ -0.08
RN7SKP10-201ENST00000364291 RAD54L2Q9Y4B4 1467 aa14.53□□□□□ -0.08
RN7SKP10-201ENST00000364291 DIP2BQ9P265 1576 aa14.52□□□□□ -0.08
RN7SKP10-201ENST00000364291 POLA1P09884 1462 aaPredicted RBP14.52□□□□□ -0.08
RN7SKP10-201ENST00000364291 ABCC8Q09428 1581 aa14.51□□□□□ -0.09
RN7SKP10-201ENST00000364291 MAGI1Q96QZ7 1491 aaPredicted RBP14.51□□□□□ -0.09
RN7SKP10-201ENST00000364291 CEP170Q5SW79 1584 aa14.45□□□□□ -0.1
RN7SKP10-201ENST00000364291 SPATA31D1Q6ZQQ2 1576 aa14.43□□□□□ -0.1
RN7SKP10-201ENST00000364291 GRIN2BQ13224 1484 aa14.4□□□□□ -0.1
RN7SKP10-201ENST00000364291 SOGA1O94964 1423 aa14.4□□□□□ -0.1
RN7SKP10-201ENST00000364291 MAPKBP1O60336 1514 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms